RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 HSPG2P98160 4391 aa1.09□□□□□ -2.23
TTC3-220ENST00000487711 FAT1Q14517 4588 aa1.09□□□□□ -2.23
TTC3-220ENST00000487711 FAT3Q8TDW7 4589 aa1.09□□□□□ -2.23
TTC3-220ENST00000487711 NEBP20929 6669 aa1.09□□□□□ -2.23
TTC3-220ENST00000487711 SPINK7P58062 85 aa1.08□□□□□ -2.24
TTC3-220ENST00000487711 COX6B2Q6YFQ2 88 aa1.08□□□□□ -2.24
TTC3-220ENST00000487711 AHNAK2Q8IVF2 5795 aa1.07□□□□□ -2.24
TTC3-220ENST00000487711 KRTAP10-4P60372 401 aaPredicted RBP1.07□□□□□ -2.24
TTC3-220ENST00000487711 LRP1Q07954 4544 aaKnown RBP1.06□□□□□ -2.24
TTC3-220ENST00000487711 RPL37P61927 97 aaKnown RBP1.05□□□□□ -2.24
TTC3-220ENST00000487711 MYCBP2O75592 4640 aa1.04□□□□□ -2.24
TTC3-220ENST00000487711 H0YAA0 97 aa1.04□□□□□ -2.24
TTC3-220ENST00000487711 H1FX-AS1Q4G0G2 97 aa1.04□□□□□ -2.24
TTC3-220ENST00000487711 SSPOA2VEC9 5147 aa1.02□□□□□ -2.25
TTC3-220ENST00000487711 M0QZ58 72 aa1.02□□□□□ -2.25
TTC3-220ENST00000487711 AHNAKQ09666 5890 aaKnown RBP1.02□□□□□ -2.25
TTC3-220ENST00000487711 Q5VSD8 79 aa1.01□□□□□ -2.25
TTC3-220ENST00000487711 S4R3F8 94 aa1.01□□□□□ -2.25
TTC3-220ENST00000487711 DMBT1Q9UGM3 2413 aaPredicted RBP1.01□□□□□ -2.25
TTC3-220ENST00000487711 C9orf92A6NGG3 77 aa1□□□□□ -2.25
TTC3-220ENST00000487711 MUC17Q685J3 4493 aa1□□□□□ -2.25
TTC3-220ENST00000487711 SMR3BP02814 79 aaPredicted RBP0.99□□□□□ -2.25
TTC3-220ENST00000487711 PLAC4Q8WY50 150 aa0.99□□□□□ -2.25
TTC3-220ENST00000487711 MUC5BQ9HC84 5762 aaPredicted RBP0.98□□□□□ -2.25
TTC3-220ENST00000487711 MT1HL1P0DM35 61 aa0.98□□□□□ -2.25
TTC3-220ENST00000487711 FLGP20930 4061 aaPredicted RBP0.98□□□□□ -2.25
TTC3-220ENST00000487711 HMCN2Q8NDA2 5059 aa0.98□□□□□ -2.25
TTC3-220ENST00000487711 LRP2P98164 4655 aa0.97□□□□□ -2.25
TTC3-220ENST00000487711 CRIPTQ9P021 101 aa0.97□□□□□ -2.25
TTC3-220ENST00000487711 RNF213Q63HN8 5207 aa0.95□□□□□ -2.26
TTC3-220ENST00000487711 KRTAP20-1Q3LI63 56 aa0.94□□□□□ -2.26
TTC3-220ENST00000487711 LPAP08519 4548 aa0.92□□□□□ -2.26
TTC3-220ENST00000487711 KMT2DO14686 5537 aa0.92□□□□□ -2.26
TTC3-220ENST00000487711 A0A0D9SG42 100 aa0.91□□□□□ -2.26
TTC3-220ENST00000487711 KRTAP19-2Q3LHN2 52 aa0.91□□□□□ -2.26
TTC3-220ENST00000487711 DSTQ03001 7570 aaKnown RBP0.91□□□□□ -2.26
TTC3-220ENST00000487711 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.27
TTC3-220ENST00000487711 TNP1P09430 55 aa0.89□□□□□ -2.27
TTC3-220ENST00000487711 SPRR2GQ9BYE4 73 aa0.88□□□□□ -2.27
TTC3-220ENST00000487711 KRTAP5-10Q6L8G5 202 aa0.87□□□□□ -2.27
TTC3-220ENST00000487711 C10orf95Q9H7T3 257 aa0.87□□□□□ -2.27
TTC3-220ENST00000487711 MUC5ACP98088 5654 aa0.86□□□□□ -2.27
TTC3-220ENST00000487711 KRTAP19-8Q3LI54 63 aa0.85□□□□□ -2.27
TTC3-220ENST00000487711 KRTAP8-1Q8IUC2 63 aa0.83□□□□□ -2.28
TTC3-220ENST00000487711 MDN1Q9NU22 5596 aa0.82□□□□□ -2.28
TTC3-220ENST00000487711 MT1HP80294 61 aa0.82□□□□□ -2.28
TTC3-220ENST00000487711 MUC12Q9UKN1 5478 aa0.82□□□□□ -2.28
TTC3-220ENST00000487711 MT2AP02795 61 aa0.81□□□□□ -2.28
TTC3-220ENST00000487711 USH2AO75445 5202 aa0.79□□□□□ -2.28
TTC3-220ENST00000487711 M0R2T5 61 aa0.79□□□□□ -2.28
TTC3-220ENST00000487711 MT1FP04733 61 aa0.79□□□□□ -2.28
TTC3-220ENST00000487711 MT1BP07438 61 aa0.78□□□□□ -2.28
TTC3-220ENST00000487711 MT1XP80297 61 aa0.77□□□□□ -2.29
TTC3-220ENST00000487711 KRTAP2-3P0C7H8 128 aa0.71□□□□□ -2.3
TTC3-220ENST00000487711 KRTAP19-6Q3LI70 58 aa0.71□□□□□ -2.3
TTC3-220ENST00000487711 KRTAP2-4Q9BYR9 128 aa0.71□□□□□ -2.3
TTC3-220ENST00000487711 KRTAP19-5Q3LI72 72 aa0.7□□□□□ -2.3
TTC3-220ENST00000487711 KRTAP19-7Q3SYF9 63 aa0.7□□□□□ -2.3
TTC3-220ENST00000487711 KRTAP2-1Q9BYU5 128 aa0.7□□□□□ -2.3
TTC3-220ENST00000487711 MT1EP04732 61 aa0.69□□□□□ -2.3
TTC3-220ENST00000487711 MT1LQ93083 61 aa0.69□□□□□ -2.3
TTC3-220ENST00000487711 MT1GP13640 62 aa0.67□□□□□ -2.3
TTC3-220ENST00000487711 KRTAP19-3Q7Z4W3 81 aa0.66□□□□□ -2.3
TTC3-220ENST00000487711 MT1MQ8N339 61 aa0.64□□□□□ -2.31
TTC3-220ENST00000487711 MT1AP04731 61 aa0.63□□□□□ -2.31
TTC3-220ENST00000487711 SYNE1Q8NF91 8797 aaKnown RBP0.6□□□□□ -2.31
TTC3-220ENST00000487711 SPRR2FQ96RM1 72 aa0.58□□□□□ -2.32
TTC3-220ENST00000487711 SPRR2AP35326 72 aa0.55□□□□□ -2.32
TTC3-220ENST00000487711 KRTAP6-1Q3LI64 71 aa0.54□□□□□ -2.32
TTC3-220ENST00000487711 SPRR2EP22531 72 aa0.53□□□□□ -2.32
TTC3-220ENST00000487711 SPRR2BP35325 72 aa0.53□□□□□ -2.32
TTC3-220ENST00000487711 SPRR2DP22532 72 aa0.52□□□□□ -2.33
TTC3-220ENST00000487711 PRM1P04553 51 aa0.5□□□□□ -2.33
TTC3-220ENST00000487711 KRTAP6-2Q3LI66 62 aa0.49□□□□□ -2.33
TTC3-220ENST00000487711 PHGR1C9JFL3 82 aa0.47□□□□□ -2.33
TTC3-220ENST00000487711 KRTAP20-2Q3LI61 65 aa0.47□□□□□ -2.33
TTC3-220ENST00000487711 KRTAP21-1Q3LI58 79 aa0.44□□□□□ -2.34
TTC3-220ENST00000487711 MT4P47944 62 aa0.4□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 11 ms