RNA–Protein interactions for RNA: ENST00000487453.1

PRDM2-208, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-208ENST00000487453 NEBP20929 6669 aa4.82□□□□□ -1.64
PRDM2-208ENST00000487453 SPRR2EP22531 72 aa4.81□□□□□ -1.64
PRDM2-208ENST00000487453 SPRR2BP35325 72 aa4.81□□□□□ -1.64
PRDM2-208ENST00000487453 SPRR2AP35326 72 aa4.81□□□□□ -1.64
PRDM2-208ENST00000487453 LCE3AQ5TA76 89 aa4.81□□□□□ -1.64
PRDM2-208ENST00000487453 KRTAP25-1Q3LHN0 102 aa4.8□□□□□ -1.64
PRDM2-208ENST00000487453 BRK1Q8WUW1 75 aa4.77□□□□□ -1.65
PRDM2-208ENST00000487453 KRTAP19-7Q3SYF9 63 aa4.76□□□□□ -1.65
PRDM2-208ENST00000487453 MDN1Q9NU22 5596 aa4.75□□□□□ -1.65
PRDM2-208ENST00000487453 LCE1AQ5T7P2 110 aa4.75□□□□□ -1.65
PRDM2-208ENST00000487453 ROMO1P60602 79 aa4.74□□□□□ -1.65
PRDM2-208ENST00000487453 KRTAP19-5Q3LI72 72 aa4.74□□□□□ -1.65
PRDM2-208ENST00000487453 MT1EP04732 61 aa4.71□□□□□ -1.66
PRDM2-208ENST00000487453 SPRR2DP22532 72 aa4.65□□□□□ -1.67
PRDM2-208ENST00000487453 KRTAP19-3Q7Z4W3 81 aa4.62□□□□□ -1.67
PRDM2-208ENST00000487453 KRTAP12-3P60328 96 aa4.61□□□□□ -1.67
PRDM2-208ENST00000487453 KRTAP20-1Q3LI63 56 aa4.6□□□□□ -1.67
PRDM2-208ENST00000487453 KRTAP23-1A1A580 65 aa4.59□□□□□ -1.67
PRDM2-208ENST00000487453 MT1LQ93083 61 aa4.55□□□□□ -1.68
PRDM2-208ENST00000487453 KRTAP2-3P0C7H8 128 aa4.53□□□□□ -1.68
PRDM2-208ENST00000487453 PP632Q6XCG6 107 aa4.53□□□□□ -1.68
PRDM2-208ENST00000487453 KRTAP2-4Q9BYR9 128 aa4.53□□□□□ -1.68
PRDM2-208ENST00000487453 MT1GP13640 62 aa4.52□□□□□ -1.69
PRDM2-208ENST00000487453 SVIPQ8NHG7 77 aa4.49□□□□□ -1.69
PRDM2-208ENST00000487453 PMAIP1Q13794 54 aa4.47□□□□□ -1.69
PRDM2-208ENST00000487453 MT1MQ8N339 61 aa4.47□□□□□ -1.69
PRDM2-208ENST00000487453 KRTAP15-1Q3LI76 137 aa4.41□□□□□ -1.7
PRDM2-208ENST00000487453 KRTAP2-2Q9BYT5 123 aa4.41□□□□□ -1.7
PRDM2-208ENST00000487453 KRTAP2-1Q9BYU5 128 aa4.41□□□□□ -1.7
PRDM2-208ENST00000487453 PRO0628Q9UI54 55 aa4.4□□□□□ -1.71
PRDM2-208ENST00000487453 GPR98Q8WXG9 6306 aa4.38□□□□□ -1.71
PRDM2-208ENST00000487453 KRTAP4-3Q9BYR4 195 aa4.37□□□□□ -1.71
PRDM2-208ENST00000487453 DSTQ03001 7570 aaKnown RBP4.33□□□□□ -1.72
PRDM2-208ENST00000487453 LCE3CQ5T5A8 94 aa4.27□□□□□ -1.73
PRDM2-208ENST00000487453 PRAC1Q96KF2 57 aa4.24□□□□□ -1.73
PRDM2-208ENST00000487453 KTN1-AS1Q86SY8 53 aa4.15□□□□□ -1.75
PRDM2-208ENST00000487453 MT4P47944 62 aa4.05□□□□□ -1.76
PRDM2-208ENST00000487453 KRTAP5-4Q6L8H1 288 aa4.05□□□□□ -1.76
PRDM2-208ENST00000487453 KRTAP5-5Q701N2 237 aaPredicted RBP4.05□□□□□ -1.76
PRDM2-208ENST00000487453 KRTAP9-6A8MVA2 160 aa4.01□□□□□ -1.77
PRDM2-208ENST00000487453 HMCN1Q96RW7 5635 aa3.9□□□□□ -1.79
PRDM2-208ENST00000487453 KRTAP12-4P60329 112 aa3.89□□□□□ -1.79
PRDM2-208ENST00000487453 MT1AP04731 61 aa3.88□□□□□ -1.79
PRDM2-208ENST00000487453 KRTAP6-1Q3LI64 71 aa3.84□□□□□ -1.79
PRDM2-208ENST00000487453 A0A0A0MQY5 61 aa3.83□□□□□ -1.8
PRDM2-208ENST00000487453 SPRR5A0A1B0GTR4 108 aa3.83□□□□□ -1.8
PRDM2-208ENST00000487453 KRTAP20-2Q3LI61 65 aa3.83□□□□□ -1.8
PRDM2-208ENST00000487453 AHNAK2Q8IVF2 5795 aa3.82□□□□□ -1.8
PRDM2-208ENST00000487453 SYNE1Q8NF91 8797 aaKnown RBP3.76□□□□□ -1.81
PRDM2-208ENST00000487453 KRTAP5-10Q6L8G5 202 aa3.7□□□□□ -1.82
PRDM2-208ENST00000487453 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.68□□□□□ -1.82
PRDM2-208ENST00000487453 KRTAP6-2Q3LI66 62 aa3.62□□□□□ -1.83
PRDM2-208ENST00000487453 KRTAP5-7Q6L8G8 165 aa3.6□□□□□ -1.83
PRDM2-208ENST00000487453 KRTAP5-2Q701N4 177 aa3.6□□□□□ -1.83
PRDM2-208ENST00000487453 MT3P25713 68 aa3.54□□□□□ -1.84
PRDM2-208ENST00000487453 LUZP6Q538Z0 58 aa3.54□□□□□ -1.84
PRDM2-208ENST00000487453 KRTAP5-11Q6L8G4 156 aa3.48□□□□□ -1.85
PRDM2-208ENST00000487453 AHNAKQ09666 5890 aaKnown RBP3.36□□□□□ -1.87
PRDM2-208ENST00000487453 OBSCNQ5VST9 7968 aa3.35□□□□□ -1.87
PRDM2-208ENST00000487453 KRTAP5-8O75690 187 aa3.28□□□□□ -1.88
PRDM2-208ENST00000487453 MUC5ACP98088 5654 aa3.27□□□□□ -1.89
PRDM2-208ENST00000487453 MUC5BQ9HC84 5762 aaPredicted RBP3.25□□□□□ -1.89
PRDM2-208ENST00000487453 KRTAP5-1Q6L8H4 278 aa3.17□□□□□ -1.9
PRDM2-208ENST00000487453 NDUFAF8A1L188 74 aa3.15□□□□□ -1.91
PRDM2-208ENST00000487453 LCE1EQ5T753 118 aa3.15□□□□□ -1.91
PRDM2-208ENST00000487453 LCE3DQ9BYE3 92 aa3.15□□□□□ -1.91
PRDM2-208ENST00000487453 KRTAP4-4Q9BYR3 166 aa3.06□□□□□ -1.92
PRDM2-208ENST00000487453 LCE3EQ5T5B0 92 aa3.01□□□□□ -1.93
PRDM2-208ENST00000487453 LCE1BQ5T7P3 118 aa3□□□□□ -1.93
PRDM2-208ENST00000487453 LCE1CQ5T751 118 aa2.93□□□□□ -1.94
PRDM2-208ENST00000487453 LCE1FQ5T754 118 aa2.71□□□□□ -1.98
PRDM2-208ENST00000487453 INE1O15225 51 aa2.56□□□□□ -2
PRDM2-208ENST00000487453 KRTAP21-2Q3LI59 83 aa2.51□□□□□ -2.01
PRDM2-208ENST00000487453 PRM1P04553 51 aa2.45□□□□□ -2.02
PRDM2-208ENST00000487453 PHGR1C9JFL3 82 aa2.26□□□□□ -2.05
PRDM2-208ENST00000487453 MUC19Q7Z5P9 8384 aa2□□□□□ -2.09
PRDM2-208ENST00000487453 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
PRDM2-208ENST00000487453 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 42.1 ms