RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 PLAC4Q8WY50 150 aa1.14□□□□□ -2.23
PRPF38A-203ENST00000487160 APOC3P02656 99 aa1.13□□□□□ -2.23
PRPF38A-203ENST00000487160 MRPL34Q9BQ48 92 aaKnown RBP1.13□□□□□ -2.23
PRPF38A-203ENST00000487160 MMP24-AS1A0A0U1RRL7 71 aa1.12□□□□□ -2.23
PRPF38A-203ENST00000487160 H0YGX0 51 aa1.12□□□□□ -2.23
PRPF38A-203ENST00000487160 K7EQZ3 153 aa1.12□□□□□ -2.23
PRPF38A-203ENST00000487160 KRTAP19-3Q7Z4W3 81 aa1.12□□□□□ -2.23
PRPF38A-203ENST00000487160 KRTDAPP60985 99 aa1.11□□□□□ -2.23
PRPF38A-203ENST00000487160 SVBPQ8N300 66 aa1.11□□□□□ -2.23
PRPF38A-203ENST00000487160 SERP1Q9Y6X1 66 aa1.11□□□□□ -2.23
PRPF38A-203ENST00000487160 A0A087WVE0 104 aa1.09□□□□□ -2.23
PRPF38A-203ENST00000487160 H0YAA0 97 aa1.09□□□□□ -2.23
PRPF38A-203ENST00000487160 MT1EP04732 61 aa1.09□□□□□ -2.23
PRPF38A-203ENST00000487160 KRTAP19-7Q3SYF9 63 aa1.09□□□□□ -2.23
PRPF38A-203ENST00000487160 A0A1W2PPM0 123 aa1.07□□□□□ -2.24
PRPF38A-203ENST00000487160 HCG22E2RYF7 251 aa1.07□□□□□ -2.24
PRPF38A-203ENST00000487160 KRTAP20-2Q3LI61 65 aa1.07□□□□□ -2.24
PRPF38A-203ENST00000487160 M0QZ58 72 aa1.06□□□□□ -2.24
PRPF38A-203ENST00000487160 MT1GP13640 62 aa1.06□□□□□ -2.24
PRPF38A-203ENST00000487160 C20orf197Q8N268 126 aa1.06□□□□□ -2.24
PRPF38A-203ENST00000487160 PRO1854Q9UHT4 67 aa1.06□□□□□ -2.24
PRPF38A-203ENST00000487160 MT1MQ8N339 61 aa1.05□□□□□ -2.24
PRPF38A-203ENST00000487160 SPTSSBQ8NFR3 76 aa1.05□□□□□ -2.24
PRPF38A-203ENST00000487160 AHNAKQ09666 5890 aaKnown RBP1.04□□□□□ -2.24
PRPF38A-203ENST00000487160 NDUFC1O43677 76 aa1.04□□□□□ -2.24
PRPF38A-203ENST00000487160 NREPQ16612 68 aa1.04□□□□□ -2.24
PRPF38A-203ENST00000487160 MUC5ACP98088 5654 aa1.04□□□□□ -2.24
PRPF38A-203ENST00000487160 COX8AP10176 69 aa1.03□□□□□ -2.24
PRPF38A-203ENST00000487160 K7EP34 96 aa1.02□□□□□ -2.25
PRPF38A-203ENST00000487160 COX6CP09669 75 aa1.02□□□□□ -2.25
PRPF38A-203ENST00000487160 HIGD1BQ9P298 99 aa1.02□□□□□ -2.25
PRPF38A-203ENST00000487160 A0A0D9SG42 100 aa1.01□□□□□ -2.25
PRPF38A-203ENST00000487160 KRTAP19-5Q3LI72 72 aa1.01□□□□□ -2.25
PRPF38A-203ENST00000487160 MT1LQ93083 61 aa1.01□□□□□ -2.25
PRPF38A-203ENST00000487160 C14orf144Q96I85 54 aa1.01□□□□□ -2.25
PRPF38A-203ENST00000487160 MUC5BQ9HC84 5762 aaPredicted RBP1□□□□□ -2.25
PRPF38A-203ENST00000487160 CYP4F30PQ9H0H9 118 aa1□□□□□ -2.25
PRPF38A-203ENST00000487160 MT-ATP8P03928 68 aa0.99□□□□□ -2.25
PRPF38A-203ENST00000487160 S100A1P23297 94 aa0.98□□□□□ -2.25
PRPF38A-203ENST00000487160 ACYP1P07311 99 aa0.97□□□□□ -2.25
PRPF38A-203ENST00000487160 ATXN8Q156A1 80 aa0.97□□□□□ -2.25
PRPF38A-203ENST00000487160 VAMP8Q9BV40 100 aa0.96□□□□□ -2.26
PRPF38A-203ENST00000487160 TP53AIP1Q9HCN2 124 aa0.96□□□□□ -2.26
PRPF38A-203ENST00000487160 TRAV22A0A0B4J277 110 aa0.95□□□□□ -2.26
PRPF38A-203ENST00000487160 HSD52Q0P140 79 aa0.95□□□□□ -2.26
PRPF38A-203ENST00000487160 SPCS1Q9Y6A9 102 aa0.93□□□□□ -2.26
PRPF38A-203ENST00000487160 SYNE1Q8NF91 8797 aaKnown RBP0.93□□□□□ -2.26
PRPF38A-203ENST00000487160 C10orf95Q9H7T3 257 aa0.92□□□□□ -2.26
PRPF38A-203ENST00000487160 H0Y9P7 68 aa0.9□□□□□ -2.27
PRPF38A-203ENST00000487160 UBL5Q9BZL1 73 aa0.9□□□□□ -2.27
PRPF38A-203ENST00000487160 ATOX1O00244 68 aa0.89□□□□□ -2.27
PRPF38A-203ENST00000487160 KRTAP6-1Q3LI64 71 aa0.87□□□□□ -2.27
PRPF38A-203ENST00000487160 KRTAP6-2Q3LI66 62 aa0.87□□□□□ -2.27
PRPF38A-203ENST00000487160 UQCR10Q9UDW1 63 aa0.87□□□□□ -2.27
PRPF38A-203ENST00000487160 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
PRPF38A-203ENST00000487160 ACYP2P14621 99 aa0.86□□□□□ -2.27
PRPF38A-203ENST00000487160 MT1AP04731 61 aa0.85□□□□□ -2.27
PRPF38A-203ENST00000487160 PYY3Q5JQD4 70 aa0.85□□□□□ -2.27
PRPF38A-203ENST00000487160 M0R143 59 aa0.84□□□□□ -2.27
PRPF38A-203ENST00000487160 SPATA8Q6RVD6 105 aa0.84□□□□□ -2.27
PRPF38A-203ENST00000487160 GTF2H5Q6ZYL4 71 aa0.83□□□□□ -2.28
PRPF38A-203ENST00000487160 TNP1P09430 55 aa0.81□□□□□ -2.28
PRPF38A-203ENST00000487160 ATP5EP56381 51 aaPredicted RBP0.81□□□□□ -2.28
PRPF38A-203ENST00000487160 SMIM6P0DI80 62 aa0.8□□□□□ -2.28
PRPF38A-203ENST00000487160 CHKB-CPT1BH3BT56 60 aa0.79□□□□□ -2.28
PRPF38A-203ENST00000487160 PRR15LQ9BU68 103 aa0.79□□□□□ -2.28
PRPF38A-203ENST00000487160 ATP5EP2Q5VTU8 51 aa0.77□□□□□ -2.29
PRPF38A-203ENST00000487160 LINC01558Q9Y6Z2 57 aa0.76□□□□□ -2.29
PRPF38A-203ENST00000487160 PHGR1C9JFL3 82 aa0.74□□□□□ -2.29
PRPF38A-203ENST00000487160 ETDBQ3ZM63 59 aa0.74□□□□□ -2.29
PRPF38A-203ENST00000487160 UQCR11O14957 56 aa0.71□□□□□ -2.3
PRPF38A-203ENST00000487160 LINC00643Q86TS7 51 aa0.69□□□□□ -2.3
PRPF38A-203ENST00000487160 COL5A1-AS1Q5SY13 56 aa0.66□□□□□ -2.3
PRPF38A-203ENST00000487160 SERP2Q8N6R1 65 aa0.66□□□□□ -2.3
PRPF38A-203ENST00000487160 A0A1B0GU69 56 aa0.64□□□□□ -2.31
PRPF38A-203ENST00000487160 KRTAP21-1Q3LI58 79 aa0.64□□□□□ -2.31
PRPF38A-203ENST00000487160 H7BZZ5 65 aa0.62□□□□□ -2.31
PRPF38A-203ENST00000487160 PRM1P04553 51 aa0.23□□□□□ -2.37
Retrieved 78 of 20,778 RNA–protein pairs in 9.3 ms