RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 SPRR2BP35325 72 aa1.67□□□□□ -2.14
SNRNP40-205ENST00000486941 SPRR2AP35326 72 aa1.67□□□□□ -2.14
SNRNP40-205ENST00000486941 MP68P56378 58 aa1.67□□□□□ -2.14
SNRNP40-205ENST00000486941 SPRR2FQ96RM1 72 aa1.67□□□□□ -2.14
SNRNP40-205ENST00000486941 KRTAP2-1Q9BYU5 128 aa1.67□□□□□ -2.14
SNRNP40-205ENST00000486941 TRAV22A0A0B4J277 110 aa1.66□□□□□ -2.14
SNRNP40-205ENST00000486941 LOC101927531A0A1B0GV80 90 aa1.66□□□□□ -2.14
SNRNP40-205ENST00000486941 CAMK2N1Q7Z7J9 78 aa1.66□□□□□ -2.14
SNRNP40-205ENST00000486941 SNURFQ9Y675 71 aa1.66□□□□□ -2.14
SNRNP40-205ENST00000486941 TP53AIP1Q9HCN2 124 aa1.65□□□□□ -2.15
SNRNP40-205ENST00000486941 PRO2289Q9P1D8 64 aa1.65□□□□□ -2.15
SNRNP40-205ENST00000486941 H0YAA0 97 aa1.64□□□□□ -2.15
SNRNP40-205ENST00000486941 MT1XP80297 61 aa1.63□□□□□ -2.15
SNRNP40-205ENST00000486941 KRTAP8-1Q8IUC2 63 aa1.63□□□□□ -2.15
SNRNP40-205ENST00000486941 UBL5Q9BZL1 73 aa1.63□□□□□ -2.15
SNRNP40-205ENST00000486941 A8MUN3 132 aa1.62□□□□□ -2.15
SNRNP40-205ENST00000486941 SPRR2DP22532 72 aa1.62□□□□□ -2.15
SNRNP40-205ENST00000486941 PLAC4Q8WY50 150 aa1.62□□□□□ -2.15
SNRNP40-205ENST00000486941 SPANXA2-OT1Q8N9U9 137 aa1.61□□□□□ -2.15
SNRNP40-205ENST00000486941 CDC42SE1Q9NRR8 79 aa1.61□□□□□ -2.15
SNRNP40-205ENST00000486941 KRTAP12-3P60328 96 aa1.6□□□□□ -2.15
SNRNP40-205ENST00000486941 ADM2Q7Z4H4 148 aa1.6□□□□□ -2.15
SNRNP40-205ENST00000486941 LINC01558Q9Y6Z2 57 aa1.59□□□□□ -2.15
SNRNP40-205ENST00000486941 LINC01554Q52M75 96 aa1.57□□□□□ -2.16
SNRNP40-205ENST00000486941 R4GN34 69 aa1.57□□□□□ -2.16
SNRNP40-205ENST00000486941 H3BPC8 53 aa1.56□□□□□ -2.16
SNRNP40-205ENST00000486941 LUZP6Q538Z0 58 aa1.56□□□□□ -2.16
SNRNP40-205ENST00000486941 CHKB-CPT1BH3BT56 60 aa1.55□□□□□ -2.16
SNRNP40-205ENST00000486941 M0QZ58 72 aa1.55□□□□□ -2.16
SNRNP40-205ENST00000486941 H0Y9P7 68 aa1.54□□□□□ -2.16
SNRNP40-205ENST00000486941 P0C880 135 aa1.54□□□□□ -2.16
SNRNP40-205ENST00000486941 LINC00208Q96KT6 92 aa1.54□□□□□ -2.16
SNRNP40-205ENST00000486941 GPR98Q8WXG9 6306 aa1.53□□□□□ -2.16
SNRNP40-205ENST00000486941 SPATA8Q6RVD6 105 aa1.53□□□□□ -2.16
SNRNP40-205ENST00000486941 PRR15LQ9BU68 103 aa1.53□□□□□ -2.16
SNRNP40-205ENST00000486941 DSTQ03001 7570 aaKnown RBP1.53□□□□□ -2.17
SNRNP40-205ENST00000486941 K7ERS5 55 aa1.52□□□□□ -2.17
SNRNP40-205ENST00000486941 COA5Q86WW8 74 aa1.52□□□□□ -2.17
SNRNP40-205ENST00000486941 SPTSSBQ8NFR3 76 aa1.51□□□□□ -2.17
SNRNP40-205ENST00000486941 A6NED7 52 aa1.5□□□□□ -2.17
SNRNP40-205ENST00000486941 ROMO1P60602 79 aa1.49□□□□□ -2.17
SNRNP40-205ENST00000486941 DMAC1Q96GE9 116 aa1.49□□□□□ -2.17
SNRNP40-205ENST00000486941 KRTAP19-7Q3SYF9 63 aa1.46□□□□□ -2.18
SNRNP40-205ENST00000486941 KRTAP19-3Q7Z4W3 81 aa1.46□□□□□ -2.18
SNRNP40-205ENST00000486941 MT1EP04732 61 aa1.45□□□□□ -2.18
SNRNP40-205ENST00000486941 KRTAP25-1Q3LHN0 102 aa1.45□□□□□ -2.18
SNRNP40-205ENST00000486941 ACYP2P14621 99 aa1.44□□□□□ -2.18
SNRNP40-205ENST00000486941 MT1GP13640 62 aa1.43□□□□□ -2.18
SNRNP40-205ENST00000486941 MT4P47944 62 aa1.42□□□□□ -2.18
SNRNP40-205ENST00000486941 A0A1B0GU33 70 aa1.41□□□□□ -2.18
SNRNP40-205ENST00000486941 MIR22HGQ0VDD5 57 aa1.41□□□□□ -2.18
SNRNP40-205ENST00000486941 HMCN1Q96RW7 5635 aa1.41□□□□□ -2.18
SNRNP40-205ENST00000486941 UQCR11O14957 56 aa1.4□□□□□ -2.19
SNRNP40-205ENST00000486941 KRTAP13-4Q3LI77 160 aa1.4□□□□□ -2.19
SNRNP40-205ENST00000486941 KRTAP5-10Q6L8G5 202 aa1.4□□□□□ -2.19
SNRNP40-205ENST00000486941 A0A0D9SG42 100 aa1.39□□□□□ -2.19
SNRNP40-205ENST00000486941 KRTAP19-5Q3LI72 72 aa1.39□□□□□ -2.19
SNRNP40-205ENST00000486941 SPINT4Q6UDR6 99 aa1.39□□□□□ -2.19
SNRNP40-205ENST00000486941 MT1MQ8N339 61 aa1.39□□□□□ -2.19
SNRNP40-205ENST00000486941 AHNAK2Q8IVF2 5795 aa1.39□□□□□ -2.19
SNRNP40-205ENST00000486941 MT1LQ93083 61 aa1.37□□□□□ -2.19
SNRNP40-205ENST00000486941 A0A1B0GU69 56 aa1.36□□□□□ -2.19
SNRNP40-205ENST00000486941 KRTAP12-1P59990 96 aa1.32□□□□□ -2.2
SNRNP40-205ENST00000486941 C10orf95Q9H7T3 257 aa1.32□□□□□ -2.2
SNRNP40-205ENST00000486941 KRTAP20-2Q3LI61 65 aa1.31□□□□□ -2.2
SNRNP40-205ENST00000486941 TNP1P09430 55 aa1.3□□□□□ -2.2
SNRNP40-205ENST00000486941 SYNE1Q8NF91 8797 aaKnown RBP1.26□□□□□ -2.21
SNRNP40-205ENST00000486941 AHNAKQ09666 5890 aaKnown RBP1.18□□□□□ -2.22
SNRNP40-205ENST00000486941 MT1AP04731 61 aa1.17□□□□□ -2.22
SNRNP40-205ENST00000486941 MUC5ACP98088 5654 aa1.17□□□□□ -2.22
SNRNP40-205ENST00000486941 MUC5BQ9HC84 5762 aaPredicted RBP1.16□□□□□ -2.22
SNRNP40-205ENST00000486941 KRTAP6-1Q3LI64 71 aa1.16□□□□□ -2.22
SNRNP40-205ENST00000486941 INE1O15225 51 aa1.14□□□□□ -2.23
SNRNP40-205ENST00000486941 KRTAP6-2Q3LI66 62 aa1.13□□□□□ -2.23
SNRNP40-205ENST00000486941 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
SNRNP40-205ENST00000486941 PHGR1C9JFL3 82 aa0.81□□□□□ -2.28
SNRNP40-205ENST00000486941 PRM1P04553 51 aa0.69□□□□□ -2.3
SNRNP40-205ENST00000486941 KRTAP21-1Q3LI58 79 aa0.63□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 60.5 ms