RNA–Protein interactions for RNA: ENST00000486827.1

RAD51C-210, Transcript of RAD51 paralog C, humanhuman

TSL 2

Gene RAD51C, Length 1,609 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51C-210ENST00000486827 KRTAP23-1A1A580 65 aa5.33□□□□□ -1.56
RAD51C-210ENST00000486827 SPRR2FQ96RM1 72 aa5.33□□□□□ -1.56
RAD51C-210ENST00000486827 KRTAP10-7P60409 375 aaPredicted RBP5.3□□□□□ -1.56
RAD51C-210ENST00000486827 KRTAP4-2Q9BYR5 136 aa5.3□□□□□ -1.56
RAD51C-210ENST00000486827 KRTAP20-1Q3LI63 56 aa5.29□□□□□ -1.56
RAD51C-210ENST00000486827 KRTAP8-1Q8IUC2 63 aa5.29□□□□□ -1.56
RAD51C-210ENST00000486827 SPRR2EP22531 72 aa5.25□□□□□ -1.57
RAD51C-210ENST00000486827 SPRR2BP35325 72 aa5.25□□□□□ -1.57
RAD51C-210ENST00000486827 SPRR2AP35326 72 aa5.25□□□□□ -1.57
RAD51C-210ENST00000486827 KRTAP10-12P60413 245 aa5.22□□□□□ -1.57
RAD51C-210ENST00000486827 KRTAP15-1Q3LI76 137 aa5.22□□□□□ -1.57
RAD51C-210ENST00000486827 LCE1AQ5T7P2 110 aa5.21□□□□□ -1.58
RAD51C-210ENST00000486827 LCE3AQ5TA76 89 aa5.17□□□□□ -1.58
RAD51C-210ENST00000486827 KRTAP2-3P0C7H8 128 aa5.14□□□□□ -1.59
RAD51C-210ENST00000486827 KRTAP2-4Q9BYR9 128 aa5.14□□□□□ -1.59
RAD51C-210ENST00000486827 H3BS24 57 aa5.13□□□□□ -1.59
RAD51C-210ENST00000486827 KRTAP4-11Q9BYQ6 195 aa5.1□□□□□ -1.59
RAD51C-210ENST00000486827 SPRR2DP22532 72 aa5.06□□□□□ -1.6
RAD51C-210ENST00000486827 KRTAP5-3Q6L8H2 238 aa5□□□□□ -1.61
RAD51C-210ENST00000486827 KRTAP2-2Q9BYT5 123 aa4.98□□□□□ -1.61
RAD51C-210ENST00000486827 KRTAP2-1Q9BYU5 128 aa4.98□□□□□ -1.61
RAD51C-210ENST00000486827 KRTAP19-7Q3SYF9 63 aa4.96□□□□□ -1.62
RAD51C-210ENST00000486827 KRTAP12-3P60328 96 aa4.94□□□□□ -1.62
RAD51C-210ENST00000486827 SPRR5A0A1B0GTR4 108 aa4.92□□□□□ -1.62
RAD51C-210ENST00000486827 MT1EP04732 61 aa4.89□□□□□ -1.63
RAD51C-210ENST00000486827 NDUFAF8A1L188 74 aa4.88□□□□□ -1.63
RAD51C-210ENST00000486827 KRTAP19-5Q3LI72 72 aa4.85□□□□□ -1.63
RAD51C-210ENST00000486827 LCE5AQ5TCM9 118 aa4.84□□□□□ -1.63
RAD51C-210ENST00000486827 LCE4AQ5TA78 99 aa4.83□□□□□ -1.64
RAD51C-210ENST00000486827 KRTAP19-3Q7Z4W3 81 aa4.83□□□□□ -1.64
RAD51C-210ENST00000486827 DSTQ03001 7570 aaKnown RBP4.82□□□□□ -1.64
RAD51C-210ENST00000486827 LUZP6Q538Z0 58 aa4.76□□□□□ -1.65
RAD51C-210ENST00000486827 MT1LQ93083 61 aa4.68□□□□□ -1.66
RAD51C-210ENST00000486827 MT1GP13640 62 aa4.67□□□□□ -1.66
RAD51C-210ENST00000486827 MT1MQ8N339 61 aa4.65□□□□□ -1.66
RAD51C-210ENST00000486827 LCE3CQ5T5A8 94 aa4.64□□□□□ -1.67
RAD51C-210ENST00000486827 KRTAP4-3Q9BYR4 195 aa4.62□□□□□ -1.67
RAD51C-210ENST00000486827 KRTAP19-4Q3LI73 84 aa4.61□□□□□ -1.67
RAD51C-210ENST00000486827 MT4P47944 62 aa4.46□□□□□ -1.69
RAD51C-210ENST00000486827 GPR98Q8WXG9 6306 aa4.45□□□□□ -1.7
RAD51C-210ENST00000486827 KRTAP9-6A8MVA2 160 aa4.45□□□□□ -1.7
RAD51C-210ENST00000486827 HMCN1Q96RW7 5635 aa4.42□□□□□ -1.7
RAD51C-210ENST00000486827 KRTAP5-4Q6L8H1 288 aa4.42□□□□□ -1.7
RAD51C-210ENST00000486827 A0A0A0MQY5 61 aa4.32□□□□□ -1.72
RAD51C-210ENST00000486827 KRTAP5-5Q701N2 237 aaPredicted RBP4.28□□□□□ -1.72
RAD51C-210ENST00000486827 AHNAK2Q8IVF2 5795 aa4.26□□□□□ -1.73
RAD51C-210ENST00000486827 KRTAP5-10Q6L8G5 202 aa4.18□□□□□ -1.74
RAD51C-210ENST00000486827 SYNE1Q8NF91 8797 aaKnown RBP4.18□□□□□ -1.74
RAD51C-210ENST00000486827 KRTAP20-2Q3LI61 65 aa4.17□□□□□ -1.74
RAD51C-210ENST00000486827 KRTAP12-4P60329 112 aa4.06□□□□□ -1.76
RAD51C-210ENST00000486827 INE1O15225 51 aa4.01□□□□□ -1.77
RAD51C-210ENST00000486827 KRTAP6-1Q3LI64 71 aa3.99□□□□□ -1.77
RAD51C-210ENST00000486827 KRTAP5-7Q6L8G8 165 aa3.98□□□□□ -1.77
RAD51C-210ENST00000486827 MT1AP04731 61 aa3.95□□□□□ -1.78
RAD51C-210ENST00000486827 KRTAP5-2Q701N4 177 aa3.88□□□□□ -1.79
RAD51C-210ENST00000486827 KRTAP6-2Q3LI66 62 aa3.78□□□□□ -1.8
RAD51C-210ENST00000486827 OBSCNQ5VST9 7968 aa3.72□□□□□ -1.81
RAD51C-210ENST00000486827 KRTAP5-8O75690 187 aa3.69□□□□□ -1.82
RAD51C-210ENST00000486827 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.66□□□□□ -1.82
RAD51C-210ENST00000486827 MT3P25713 68 aa3.58□□□□□ -1.84
RAD51C-210ENST00000486827 KRTAP5-1Q6L8H4 278 aa3.5□□□□□ -1.85
RAD51C-210ENST00000486827 LCE3DQ9BYE3 92 aa3.5□□□□□ -1.85
RAD51C-210ENST00000486827 MUC5BQ9HC84 5762 aaPredicted RBP3.48□□□□□ -1.85
RAD51C-210ENST00000486827 MUC5ACP98088 5654 aa3.44□□□□□ -1.86
RAD51C-210ENST00000486827 LCE3EQ5T5B0 92 aa3.43□□□□□ -1.86
RAD51C-210ENST00000486827 AHNAKQ09666 5890 aaKnown RBP3.42□□□□□ -1.86
RAD51C-210ENST00000486827 KRTAP5-11Q6L8G4 156 aa3.4□□□□□ -1.87
RAD51C-210ENST00000486827 LCE1EQ5T753 118 aa3.26□□□□□ -1.89
RAD51C-210ENST00000486827 LCE1BQ5T7P3 118 aa3.14□□□□□ -1.91
RAD51C-210ENST00000486827 PRM1P04553 51 aa3.11□□□□□ -1.91
RAD51C-210ENST00000486827 LCE1CQ5T751 118 aa3.05□□□□□ -1.92
RAD51C-210ENST00000486827 KRTAP4-4Q9BYR3 166 aa3.03□□□□□ -1.92
RAD51C-210ENST00000486827 LCE1FQ5T754 118 aa2.64□□□□□ -1.99
RAD51C-210ENST00000486827 KRTAP21-2Q3LI59 83 aa2.62□□□□□ -1.99
RAD51C-210ENST00000486827 PHGR1C9JFL3 82 aa2.41□□□□□ -2.02
RAD51C-210ENST00000486827 MUC19Q7Z5P9 8384 aa2.28□□□□□ -2.04
RAD51C-210ENST00000486827 KRTAP21-1Q3LI58 79 aa1.96□□□□□ -2.1
RAD51C-210ENST00000486827 MUC16Q8WXI7 14507 aa1.58□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 76.6 ms