RNA–Protein interactions for RNA: ENST00000486335.1

CCDC142-208, Transcript of coiled-coil domain containing 142, humanhuman

TSL 5

Gene CCDC142, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-208ENST00000486335 PRO2289Q9P1D8 64 aa3.73□□□□□ -1.81
CCDC142-208ENST00000486335 CAMK2N1Q7Z7J9 78 aa3.71□□□□□ -1.82
CCDC142-208ENST00000486335 KRTAP10-7P60409 375 aaPredicted RBP3.69□□□□□ -1.82
CCDC142-208ENST00000486335 C10orf95Q9H7T3 257 aa3.66□□□□□ -1.82
CCDC142-208ENST00000486335 KRTAP10-12P60413 245 aa3.64□□□□□ -1.83
CCDC142-208ENST00000486335 LCE1DQ5T752 114 aa3.63□□□□□ -1.83
CCDC142-208ENST00000486335 KRTAP25-1Q3LHN0 102 aa3.61□□□□□ -1.83
CCDC142-208ENST00000486335 KRTAP5-10Q6L8G5 202 aa3.6□□□□□ -1.83
CCDC142-208ENST00000486335 HMCN1Q96RW7 5635 aa3.59□□□□□ -1.84
CCDC142-208ENST00000486335 PP632Q6XCG6 107 aa3.58□□□□□ -1.84
CCDC142-208ENST00000486335 AHNAK2Q8IVF2 5795 aa3.58□□□□□ -1.84
CCDC142-208ENST00000486335 LCE5AQ5TCM9 118 aa3.57□□□□□ -1.84
CCDC142-208ENST00000486335 KRTAP23-1A1A580 65 aa3.56□□□□□ -1.84
CCDC142-208ENST00000486335 TNP1P09430 55 aa3.55□□□□□ -1.84
CCDC142-208ENST00000486335 PRAC1Q96KF2 57 aa3.51□□□□□ -1.85
CCDC142-208ENST00000486335 MT4P47944 62 aa3.5□□□□□ -1.85
CCDC142-208ENST00000486335 KRTAP5-7Q6L8G8 165 aa3.49□□□□□ -1.85
CCDC142-208ENST00000486335 KRTAP19-7Q3SYF9 63 aa3.48□□□□□ -1.85
CCDC142-208ENST00000486335 LCE4AQ5TA78 99 aa3.46□□□□□ -1.86
CCDC142-208ENST00000486335 KRTAP19-3Q7Z4W3 81 aa3.46□□□□□ -1.86
CCDC142-208ENST00000486335 MT1EP04732 61 aa3.44□□□□□ -1.86
CCDC142-208ENST00000486335 KRTAP4-6Q9BYQ5 205 aa3.44□□□□□ -1.86
CCDC142-208ENST00000486335 KRTAP5-4Q6L8H1 288 aa3.41□□□□□ -1.86
CCDC142-208ENST00000486335 KRTAP5-3Q6L8H2 238 aa3.4□□□□□ -1.87
CCDC142-208ENST00000486335 LCE3AQ5TA76 89 aa3.39□□□□□ -1.87
CCDC142-208ENST00000486335 SPRR5A0A1B0GTR4 108 aa3.37□□□□□ -1.87
CCDC142-208ENST00000486335 MT1GP13640 62 aa3.32□□□□□ -1.88
CCDC142-208ENST00000486335 MT1MQ8N339 61 aa3.29□□□□□ -1.88
CCDC142-208ENST00000486335 KRTAP4-3Q9BYR4 195 aa3.29□□□□□ -1.88
CCDC142-208ENST00000486335 KRTAP12-3P60328 96 aa3.28□□□□□ -1.88
CCDC142-208ENST00000486335 KRTAP19-5Q3LI72 72 aa3.28□□□□□ -1.88
CCDC142-208ENST00000486335 KRTAP19-4Q3LI73 84 aa3.26□□□□□ -1.89
CCDC142-208ENST00000486335 MT1LQ93083 61 aa3.22□□□□□ -1.89
CCDC142-208ENST00000486335 KRTAP20-2Q3LI61 65 aa3.21□□□□□ -1.9
CCDC142-208ENST00000486335 KRTAP15-1Q3LI76 137 aa3.21□□□□□ -1.9
CCDC142-208ENST00000486335 LUZP6Q538Z0 58 aa3.14□□□□□ -1.91
CCDC142-208ENST00000486335 AHNAKQ09666 5890 aaKnown RBP3.13□□□□□ -1.91
CCDC142-208ENST00000486335 KRTAP5-5Q701N2 237 aaPredicted RBP3.11□□□□□ -1.91
CCDC142-208ENST00000486335 SYNE1Q8NF91 8797 aaKnown RBP3.1□□□□□ -1.91
CCDC142-208ENST00000486335 KRTAP4-7Q9BYR0 210 aa3.1□□□□□ -1.91
CCDC142-208ENST00000486335 LCE3CQ5T5A8 94 aa3.07□□□□□ -1.92
CCDC142-208ENST00000486335 MUC5ACP98088 5654 aa3.05□□□□□ -1.92
CCDC142-208ENST00000486335 KRTAP4-11Q9BYQ6 195 aa3.03□□□□□ -1.92
CCDC142-208ENST00000486335 MUC5BQ9HC84 5762 aaPredicted RBP3.01□□□□□ -1.93
CCDC142-208ENST00000486335 KRTAP12-4P60329 112 aa2.99□□□□□ -1.93
CCDC142-208ENST00000486335 KRTAP5-8O75690 187 aa2.98□□□□□ -1.93
CCDC142-208ENST00000486335 LOC100996750A0A140TA64 210 aa2.95□□□□□ -1.94
CCDC142-208ENST00000486335 KRTAP5-2Q701N4 177 aa2.92□□□□□ -1.94
CCDC142-208ENST00000486335 NDUFAF8A1L188 74 aa2.91□□□□□ -1.94
CCDC142-208ENST00000486335 KRTAP9-6A8MVA2 160 aa2.89□□□□□ -1.95
CCDC142-208ENST00000486335 OBSCNQ5VST9 7968 aa2.8□□□□□ -1.96
CCDC142-208ENST00000486335 A0A0A0MQY5 61 aa2.79□□□□□ -1.96
CCDC142-208ENST00000486335 KRTAP9-9Q9BYP9 154 aa2.79□□□□□ -1.96
CCDC142-208ENST00000486335 KRTAP6-1Q3LI64 71 aa2.76□□□□□ -1.97
CCDC142-208ENST00000486335 KRTAP5-1Q6L8H4 278 aa2.71□□□□□ -1.98
CCDC142-208ENST00000486335 MT1AP04731 61 aa2.7□□□□□ -1.98
CCDC142-208ENST00000486335 KRTAP6-2Q3LI66 62 aa2.69□□□□□ -1.98
CCDC142-208ENST00000486335 H3BS24 57 aa2.68□□□□□ -1.98
CCDC142-208ENST00000486335 KRTAP9-4Q9BYQ2 154 aa2.68□□□□□ -1.98
CCDC142-208ENST00000486335 INE1O15225 51 aa2.61□□□□□ -1.99
CCDC142-208ENST00000486335 MT3P25713 68 aa2.46□□□□□ -2.02
CCDC142-208ENST00000486335 LCE1EQ5T753 118 aa2.38□□□□□ -2.03
CCDC142-208ENST00000486335 KRTAP4-2Q9BYR5 136 aa2.36□□□□□ -2.03
CCDC142-208ENST00000486335 LCE3DQ9BYE3 92 aa2.29□□□□□ -2.04
CCDC142-208ENST00000486335 KRTAP4-12Q9BQ66 201 aa2.27□□□□□ -2.05
CCDC142-208ENST00000486335 LCE1BQ5T7P3 118 aa2.25□□□□□ -2.05
CCDC142-208ENST00000486335 LCE3EQ5T5B0 92 aa2.23□□□□□ -2.05
CCDC142-208ENST00000486335 LCE1CQ5T751 118 aa2.22□□□□□ -2.05
CCDC142-208ENST00000486335 KRTAP5-11Q6L8G4 156 aa2.16□□□□□ -2.06
CCDC142-208ENST00000486335 PHGR1C9JFL3 82 aa2.07□□□□□ -2.08
CCDC142-208ENST00000486335 LCE1FQ5T754 118 aa2.06□□□□□ -2.08
CCDC142-208ENST00000486335 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.99□□□□□ -2.09
CCDC142-208ENST00000486335 PRM1P04553 51 aa1.87□□□□□ -2.11
CCDC142-208ENST00000486335 KRTAP21-2Q3LI59 83 aa1.84□□□□□ -2.11
CCDC142-208ENST00000486335 MUC19Q7Z5P9 8384 aa1.76□□□□□ -2.13
CCDC142-208ENST00000486335 KRTAP4-4Q9BYR3 166 aa1.74□□□□□ -2.13
CCDC142-208ENST00000486335 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
CCDC142-208ENST00000486335 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 9.2 ms