RNA–Protein interactions for RNA: ENST00000486021.5

CPNE1-226, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-226ENST00000486021 SPRR2DP22532 72 aa2.99□□□□□ -1.93
CPNE1-226ENST00000486021 KRTAP2-2Q9BYT5 123 aa2.99□□□□□ -1.93
CPNE1-226ENST00000486021 KRTAP2-1Q9BYU5 128 aa2.99□□□□□ -1.93
CPNE1-226ENST00000486021 KRTAP10-12P60413 245 aa2.98□□□□□ -1.93
CPNE1-226ENST00000486021 LCE1AQ5T7P2 110 aa2.98□□□□□ -1.93
CPNE1-226ENST00000486021 NDUFAF8A1L188 74 aa2.96□□□□□ -1.94
CPNE1-226ENST00000486021 LCE1DQ5T752 114 aa2.95□□□□□ -1.94
CPNE1-226ENST00000486021 KRTAP10-7P60409 375 aaPredicted RBP2.94□□□□□ -1.94
CPNE1-226ENST00000486021 LUZP6Q538Z0 58 aa2.93□□□□□ -1.94
CPNE1-226ENST00000486021 KRTAP4-7Q9BYR0 210 aa2.93□□□□□ -1.94
CPNE1-226ENST00000486021 KMT2DO14686 5537 aa2.93□□□□□ -1.94
CPNE1-226ENST00000486021 KRTAP15-1Q3LI76 137 aa2.91□□□□□ -1.94
CPNE1-226ENST00000486021 MDN1Q9NU22 5596 aa2.89□□□□□ -1.95
CPNE1-226ENST00000486021 A0A0D9SG42 100 aa2.88□□□□□ -1.95
CPNE1-226ENST00000486021 KRTAP4-9Q9BYQ8 210 aa2.87□□□□□ -1.95
CPNE1-226ENST00000486021 KRTAP13-4Q3LI77 160 aa2.86□□□□□ -1.95
CPNE1-226ENST00000486021 LCE4AQ5TA78 99 aa2.86□□□□□ -1.95
CPNE1-226ENST00000486021 KRTAP19-4Q3LI73 84 aa2.82□□□□□ -1.96
CPNE1-226ENST00000486021 PP632Q6XCG6 107 aa2.82□□□□□ -1.96
CPNE1-226ENST00000486021 KRTAP4-2Q9BYR5 136 aa2.81□□□□□ -1.96
CPNE1-226ENST00000486021 TNP1P09430 55 aa2.79□□□□□ -1.96
CPNE1-226ENST00000486021 KRTAP12-1P59990 96 aa2.79□□□□□ -1.96
CPNE1-226ENST00000486021 KRTAP19-3Q7Z4W3 81 aa2.79□□□□□ -1.96
CPNE1-226ENST00000486021 MT1GP13640 62 aa2.77□□□□□ -1.97
CPNE1-226ENST00000486021 LCE5AQ5TCM9 118 aa2.77□□□□□ -1.97
CPNE1-226ENST00000486021 KRTAP4-11Q9BYQ6 195 aa2.77□□□□□ -1.97
CPNE1-226ENST00000486021 C10orf95Q9H7T3 257 aa2.77□□□□□ -1.97
CPNE1-226ENST00000486021 MT1EP04732 61 aa2.76□□□□□ -1.97
CPNE1-226ENST00000486021 KRTAP19-7Q3SYF9 63 aa2.75□□□□□ -1.97
CPNE1-226ENST00000486021 KRTAP19-5Q3LI72 72 aa2.7□□□□□ -1.98
CPNE1-226ENST00000486021 DSTQ03001 7570 aaKnown RBP2.67□□□□□ -1.98
CPNE1-226ENST00000486021 GPR98Q8WXG9 6306 aa2.65□□□□□ -1.99
CPNE1-226ENST00000486021 LCE3AQ5TA76 89 aa2.64□□□□□ -1.99
CPNE1-226ENST00000486021 MT1LQ93083 61 aa2.64□□□□□ -1.99
CPNE1-226ENST00000486021 MT1MQ8N339 61 aa2.63□□□□□ -1.99
CPNE1-226ENST00000486021 INE1O15225 51 aa2.59□□□□□ -1.99
CPNE1-226ENST00000486021 KRTAP12-3P60328 96 aa2.59□□□□□ -1.99
CPNE1-226ENST00000486021 MT4P47944 62 aa2.57□□□□□ -2
CPNE1-226ENST00000486021 KRTAP5-4Q6L8H1 288 aa2.53□□□□□ -2
CPNE1-226ENST00000486021 KRTAP12-4P60329 112 aa2.48□□□□□ -2.01
CPNE1-226ENST00000486021 KRTAP4-3Q9BYR4 195 aa2.48□□□□□ -2.01
CPNE1-226ENST00000486021 KRTAP5-3Q6L8H2 238 aa2.47□□□□□ -2.01
CPNE1-226ENST00000486021 SPRR5A0A1B0GTR4 108 aa2.46□□□□□ -2.02
CPNE1-226ENST00000486021 KRTAP5-10Q6L8G5 202 aa2.4□□□□□ -2.03
CPNE1-226ENST00000486021 KRTAP20-2Q3LI61 65 aa2.39□□□□□ -2.03
CPNE1-226ENST00000486021 KRTAP5-5Q701N2 237 aaPredicted RBP2.39□□□□□ -2.03
CPNE1-226ENST00000486021 LCE3CQ5T5A8 94 aa2.38□□□□□ -2.03
CPNE1-226ENST00000486021 HMCN1Q96RW7 5635 aa2.36□□□□□ -2.03
CPNE1-226ENST00000486021 KRTAP5-7Q6L8G8 165 aa2.35□□□□□ -2.03
CPNE1-226ENST00000486021 MT1AP04731 61 aa2.28□□□□□ -2.04
CPNE1-226ENST00000486021 AHNAK2Q8IVF2 5795 aa2.27□□□□□ -2.05
CPNE1-226ENST00000486021 SYNE1Q8NF91 8797 aaKnown RBP2.21□□□□□ -2.05
CPNE1-226ENST00000486021 KRTAP6-1Q3LI64 71 aa2.21□□□□□ -2.06
CPNE1-226ENST00000486021 KRTAP5-2Q701N4 177 aa2.19□□□□□ -2.06
CPNE1-226ENST00000486021 MT3P25713 68 aa2.14□□□□□ -2.07
CPNE1-226ENST00000486021 KRTAP6-2Q3LI66 62 aa2.13□□□□□ -2.07
CPNE1-226ENST00000486021 KRTAP9-6A8MVA2 160 aa2.11□□□□□ -2.07
CPNE1-226ENST00000486021 KRTAP5-8O75690 187 aa2.1□□□□□ -2.07
CPNE1-226ENST00000486021 OBSCNQ5VST9 7968 aa2.05□□□□□ -2.08
CPNE1-226ENST00000486021 AHNAKQ09666 5890 aaKnown RBP1.99□□□□□ -2.09
CPNE1-226ENST00000486021 LCE1EQ5T753 118 aa1.96□□□□□ -2.1
CPNE1-226ENST00000486021 KRTAP5-1Q6L8H4 278 aa1.96□□□□□ -2.1
CPNE1-226ENST00000486021 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.9□□□□□ -2.11
CPNE1-226ENST00000486021 LCE1FQ5T754 118 aa1.89□□□□□ -2.11
CPNE1-226ENST00000486021 MUC5BQ9HC84 5762 aaPredicted RBP1.88□□□□□ -2.11
CPNE1-226ENST00000486021 MUC5ACP98088 5654 aa1.88□□□□□ -2.11
CPNE1-226ENST00000486021 KRTAP5-11Q6L8G4 156 aa1.87□□□□□ -2.11
CPNE1-226ENST00000486021 LCE1BQ5T7P3 118 aa1.81□□□□□ -2.12
CPNE1-226ENST00000486021 LCE1CQ5T751 118 aa1.8□□□□□ -2.12
CPNE1-226ENST00000486021 LCE3DQ9BYE3 92 aa1.75□□□□□ -2.13
CPNE1-226ENST00000486021 LCE3EQ5T5B0 92 aa1.65□□□□□ -2.15
CPNE1-226ENST00000486021 PRM1P04553 51 aa1.59□□□□□ -2.15
CPNE1-226ENST00000486021 KRTAP4-4Q9BYR3 166 aa1.56□□□□□ -2.16
CPNE1-226ENST00000486021 PHGR1C9JFL3 82 aa1.45□□□□□ -2.18
CPNE1-226ENST00000486021 KRTAP21-2Q3LI59 83 aa1.44□□□□□ -2.18
CPNE1-226ENST00000486021 MUC19Q7Z5P9 8384 aa1.23□□□□□ -2.21
CPNE1-226ENST00000486021 KRTAP21-1Q3LI58 79 aa1.13□□□□□ -2.23
CPNE1-226ENST00000486021 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 161.9 ms