RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 VPS13CQ709C8 3753 aa-2.19□□□□□ -2.76
GCFC2-209ENST00000486016 KRTAP20-1Q3LI63 56 aa-2.2□□□□□ -2.76
GCFC2-209ENST00000486016 ABCC8Q09428 1581 aa-2.2□□□□□ -2.76
GCFC2-209ENST00000486016 FRYLO94915 3013 aa-2.21□□□□□ -2.76
GCFC2-209ENST00000486016 CMC2Q9NRP2 79 aa-2.21□□□□□ -2.76
GCFC2-209ENST00000486016 FANCD2Q9BXW9 1451 aa-2.24□□□□□ -2.77
GCFC2-209ENST00000486016 PCNTO95613 3336 aa-2.25□□□□□ -2.77
GCFC2-209ENST00000486016 SMIM31A0A1B0GVY4 71 aa-2.26□□□□□ -2.77
GCFC2-209ENST00000486016 MT1FP04733 61 aa-2.26□□□□□ -2.77
GCFC2-209ENST00000486016 CEP250Q9BV73 2442 aa-2.28□□□□□ -2.77
GCFC2-209ENST00000486016 NDUFA1O15239 70 aa-2.28□□□□□ -2.77
GCFC2-209ENST00000486016 WDFY3Q8IZQ1 3526 aa-2.3□□□□□ -2.78
GCFC2-209ENST00000486016 CEP350Q5VT06 3117 aa-2.35□□□□□ -2.79
GCFC2-209ENST00000486016 SPEGQ15772 3267 aa-2.37□□□□□ -2.79
GCFC2-209ENST00000486016 SZT2Q5T011 3432 aa-2.4□□□□□ -2.79
GCFC2-209ENST00000486016 TOMM7Q9P0U1 55 aa-2.43□□□□□ -2.8
GCFC2-209ENST00000486016 WDFY4Q6ZS81 3184 aa-2.44□□□□□ -2.8
GCFC2-209ENST00000486016 DMDP11532 3685 aa-2.45□□□□□ -2.8
GCFC2-209ENST00000486016 LINC01590Q5TEZ4 76 aa-2.49□□□□□ -2.81
GCFC2-209ENST00000486016 ERICH3Q5RHP9 1530 aa-2.49□□□□□ -2.81
GCFC2-209ENST00000486016 RHPN1-AS1Q9BWJ2 59 aa-2.53□□□□□ -2.81
GCFC2-209ENST00000486016 EP400Q96L91 3159 aa-2.56□□□□□ -2.82
GCFC2-209ENST00000486016 KRTAP19-6Q3LI70 58 aa-2.57□□□□□ -2.82
GCFC2-209ENST00000486016 SNRPGP15A8MWD9 76 aa-2.58□□□□□ -2.82
GCFC2-209ENST00000486016 TTTY10Q9BZA0 68 aa-2.59□□□□□ -2.82
GCFC2-209ENST00000486016 MUC3AQ02505 3323 aa-2.6□□□□□ -2.83
GCFC2-209ENST00000486016 DEFB133Q30KQ1 61 aa-2.6□□□□□ -2.83
GCFC2-209ENST00000486016 CENPEQ02224 2701 aa-2.6□□□□□ -2.83
GCFC2-209ENST00000486016 DNAH12Q6ZR08 3092 aa-2.62□□□□□ -2.83
GCFC2-209ENST00000486016 SAMD9LQ8IVG5 1584 aa-2.62□□□□□ -2.83
GCFC2-209ENST00000486016 DUOX1Q9NRD9 1551 aa-2.62□□□□□ -2.83
GCFC2-209ENST00000486016 DCHS1Q96JQ0 3298 aa-2.65□□□□□ -2.83
GCFC2-209ENST00000486016 A0A096LNI7 61 aa-2.65□□□□□ -2.83
GCFC2-209ENST00000486016 RPL39P62891 51 aaKnown RBP-2.65□□□□□ -2.83
GCFC2-209ENST00000486016 MKI67P46013 3256 aaKnown RBP-2.67□□□□□ -2.84
GCFC2-209ENST00000486016 HTN1P15515 57 aa-2.69□□□□□ -2.84
GCFC2-209ENST00000486016 XIRP2A4UGR9 3374 aa-2.72□□□□□ -2.84
GCFC2-209ENST00000486016 IQGAP2Q13576 1575 aa-2.74□□□□□ -2.85
GCFC2-209ENST00000486016 RPL39LQ96EH5 51 aaKnown RBP-2.77□□□□□ -2.85
GCFC2-209ENST00000486016 CD52P31358 61 aa-2.78□□□□□ -2.85
GCFC2-209ENST00000486016 TOP2AP11388 1531 aaKnown RBP-2.78□□□□□ -2.86
GCFC2-209ENST00000486016 LOC400499M0QZD8 3231 aa-2.8□□□□□ -2.86
GCFC2-209ENST00000486016 ATP7AQ04656 1500 aa-2.81□□□□□ -2.86
GCFC2-209ENST00000486016 DEFB124Q8NES8 71 aa-2.81□□□□□ -2.86
GCFC2-209ENST00000486016 USP34Q70CQ2 3546 aa-2.82□□□□□ -2.86
GCFC2-209ENST00000486016 TOMM5Q8N4H5 51 aa-2.82□□□□□ -2.86
GCFC2-209ENST00000486016 CFAP47Q6ZTR5 3102 aa-2.83□□□□□ -2.86
GCFC2-209ENST00000486016 UNC80Q8N2C7 3258 aa-2.85□□□□□ -2.87
GCFC2-209ENST00000486016 MROH2BQ7Z745 1585 aa-2.86□□□□□ -2.87
GCFC2-209ENST00000486016 DNAH14Q0VDD8 3507 aa-2.87□□□□□ -2.87
GCFC2-209ENST00000486016 KRTAP19-2Q3LHN2 52 aa-2.91□□□□□ -2.88
GCFC2-209ENST00000486016 DEFB104AQ8WTQ1 72 aa-2.92□□□□□ -2.88
GCFC2-209ENST00000486016 ASPMQ8IZT6 3477 aa-2.99□□□□□ -2.89
GCFC2-209ENST00000486016 BRCA2P51587 3418 aa-3.05□□□□□ -2.9
GCFC2-209ENST00000486016 H3BUX3 64 aa-3.08□□□□□ -2.9
GCFC2-209ENST00000486016 LINC01556Q5JQF7 62 aa-3.14□□□□□ -2.91
GCFC2-209ENST00000486016 VCANP13611 3396 aa-3.14□□□□□ -2.91
GCFC2-209ENST00000486016 K7EIM0 57 aa-3.22□□□□□ -2.92
GCFC2-209ENST00000486016 CENPFP49454 3210 aa-3.22□□□□□ -2.93
GCFC2-209ENST00000486016 CDH23Q9H251 3354 aa-3.23□□□□□ -2.93
GCFC2-209ENST00000486016 ARHGAP5-AS1Q96IT6 56 aa-3.33□□□□□ -2.94
GCFC2-209ENST00000486016 VPS13AQ96RL7 3174 aa-3.34□□□□□ -2.94
GCFC2-209ENST00000486016 GCC2Q8IWJ2 1684 aa-3.42□□□□□ -2.96
GCFC2-209ENST00000486016 PRCDQ00LT1 54 aa-3.42□□□□□ -2.96
GCFC2-209ENST00000486016 SNRPGP62308 76 aaKnown RBP-3.44□□□□□ -2.96
GCFC2-209ENST00000486016 APELAP0DMC3 54 aa-3.46□□□□□ -2.96
GCFC2-209ENST00000486016 A0A096LPF7 62 aa-3.48□□□□□ -2.97
GCFC2-209ENST00000486016 TMEM167AQ8TBQ9 72 aa-3.54□□□□□ -2.98
GCFC2-209ENST00000486016 UTRNP46939 3433 aa-3.7□□□□□ -3
GCFC2-209ENST00000486016 HTN3P15516 51 aa-3.74□□□□□ -3.01
GCFC2-209ENST00000486016 RPL39P5Q59GN2 51 aa-3.74□□□□□ -3.01
GCFC2-209ENST00000486016 H3BSH0 61 aa-3.78□□□□□ -3.01
GCFC2-209ENST00000486016 DEFB108AA8MXU0 73 aa-3.83□□□□□ -3.02
GCFC2-209ENST00000486016 Q9Y3F1 56 aa-3.9□□□□□ -3.03
GCFC2-209ENST00000486016 GOLGB1Q14789 3259 aaKnown RBP-4.03□□□□□ -3.05
GCFC2-209ENST00000486016 COX14Q96I36 57 aa-4.22□□□□□ -3.08
GCFC2-209ENST00000486016 DEFB108BQ8NET1 73 aa-4.3□□□□□ -3.1
GCFC2-209ENST00000486016 STATHP02808 62 aa-4.88□□□□□ -3.19
Retrieved 78 of 20,778 RNA–protein pairs in 158.7 ms