RNA–Protein interactions for RNA: ENST00000485830.1

PGAP1-211, Transcript of post-GPI attachment to proteins 1, humanhuman

TSL 1 (best)

Gene PGAP1, Length 1,222 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP1-211ENST00000485830 KRTAP20-1Q3LI63 56 aa0.74□□□□□ -2.29
PGAP1-211ENST00000485830 FAT2Q9NYQ8 4349 aa0.74□□□□□ -2.29
PGAP1-211ENST00000485830 DNAH3Q8TD57 4116 aa0.74□□□□□ -2.29
PGAP1-211ENST00000485830 DYNC2H1Q8NCM8 4307 aaKnown RBP0.73□□□□□ -2.29
PGAP1-211ENST00000485830 RNF213Q63HN8 5207 aa0.72□□□□□ -2.29
PGAP1-211ENST00000485830 VPS13CQ709C8 3753 aa0.72□□□□□ -2.29
PGAP1-211ENST00000485830 SMR3BP02814 79 aaPredicted RBP0.72□□□□□ -2.29
PGAP1-211ENST00000485830 Q9Y3F1 56 aa0.72□□□□□ -2.29
PGAP1-211ENST00000485830 FLGP20930 4061 aaPredicted RBP0.71□□□□□ -2.3
PGAP1-211ENST00000485830 DEFB133Q30KQ1 61 aa0.71□□□□□ -2.3
PGAP1-211ENST00000485830 KRTAP19-3Q7Z4W3 81 aa0.71□□□□□ -2.3
PGAP1-211ENST00000485830 RPS29P62273 56 aaKnown RBP0.7□□□□□ -2.3
PGAP1-211ENST00000485830 DNAH10Q8IVF4 4471 aa0.7□□□□□ -2.3
PGAP1-211ENST00000485830 TRRAPQ9Y4A5 3859 aa0.7□□□□□ -2.3
PGAP1-211ENST00000485830 HMCN2Q8NDA2 5059 aa0.69□□□□□ -2.3
PGAP1-211ENST00000485830 ANK3Q12955 4377 aaKnown RBP0.69□□□□□ -2.3
PGAP1-211ENST00000485830 KRTAP19-5Q3LI72 72 aa0.69□□□□□ -2.3
PGAP1-211ENST00000485830 HECTD4Q9Y4D8 3996 aa0.69□□□□□ -2.3
PGAP1-211ENST00000485830 DSTQ03001 7570 aaKnown RBP0.69□□□□□ -2.3
PGAP1-211ENST00000485830 U3KQA8 63 aa0.68□□□□□ -2.3
PGAP1-211ENST00000485830 HSPG2P98160 4391 aa0.68□□□□□ -2.3
PGAP1-211ENST00000485830 FRAS1Q86XX4 4008 aa0.68□□□□□ -2.3
PGAP1-211ENST00000485830 DNAH2Q9P225 4427 aa0.68□□□□□ -2.3
PGAP1-211ENST00000485830 HTN3P15516 51 aa0.67□□□□□ -2.3
PGAP1-211ENST00000485830 CMYA5Q8N3K9 4069 aa0.67□□□□□ -2.3
PGAP1-211ENST00000485830 FAT3Q8TDW7 4589 aa0.67□□□□□ -2.3
PGAP1-211ENST00000485830 PLECQ15149 4684 aaKnown RBP0.67□□□□□ -2.3
PGAP1-211ENST00000485830 DNAH6Q9C0G6 4158 aa0.66□□□□□ -2.3
PGAP1-211ENST00000485830 DEFB4AO15263 64 aa0.66□□□□□ -2.3
PGAP1-211ENST00000485830 LRP1Q07954 4544 aaKnown RBP0.65□□□□□ -2.3
PGAP1-211ENST00000485830 PKHD1P08F94 4074 aa0.65□□□□□ -2.31
PGAP1-211ENST00000485830 PKD1P98161 4303 aa0.63□□□□□ -2.31
PGAP1-211ENST00000485830 APOBP04114 4563 aaKnown RBP0.63□□□□□ -2.31
PGAP1-211ENST00000485830 HUWE1Q7Z6Z7 4374 aaKnown RBP0.63□□□□□ -2.31
PGAP1-211ENST00000485830 DNAH5Q8TE73 4624 aa0.63□□□□□ -2.31
PGAP1-211ENST00000485830 DNAH17Q9UFH2 4485 aa0.62□□□□□ -2.31
PGAP1-211ENST00000485830 DNAH1Q9P2D7 4330 aa0.62□□□□□ -2.31
PGAP1-211ENST00000485830 MT1AP04731 61 aa0.62□□□□□ -2.31
PGAP1-211ENST00000485830 KRTAP6-2Q3LI66 62 aa0.62□□□□□ -2.31
PGAP1-211ENST00000485830 KMT2DO14686 5537 aa0.61□□□□□ -2.31
PGAP1-211ENST00000485830 DNAH9Q9NYC9 4486 aa0.61□□□□□ -2.31
PGAP1-211ENST00000485830 LPAP08519 4548 aa0.6□□□□□ -2.31
PGAP1-211ENST00000485830 MDN1Q9NU22 5596 aa0.59□□□□□ -2.31
PGAP1-211ENST00000485830 KRTAP21-1Q3LI58 79 aa0.59□□□□□ -2.31
PGAP1-211ENST00000485830 USH2AO75445 5202 aa0.59□□□□□ -2.32
PGAP1-211ENST00000485830 HRNRQ86YZ3 2850 aaPredicted RBP0.59□□□□□ -2.32
PGAP1-211ENST00000485830 SPRR2DP22532 72 aa0.58□□□□□ -2.32
PGAP1-211ENST00000485830 FAT1Q14517 4588 aa0.57□□□□□ -2.32
PGAP1-211ENST00000485830 SPRR2BP35325 72 aa0.57□□□□□ -2.32
PGAP1-211ENST00000485830 SYNE1Q8NF91 8797 aaKnown RBP0.57□□□□□ -2.32
PGAP1-211ENST00000485830 MUC12Q9UKN1 5478 aa0.55□□□□□ -2.32
PGAP1-211ENST00000485830 DYNC1H1Q14204 4646 aaKnown RBP0.55□□□□□ -2.32
PGAP1-211ENST00000485830 SPRR2FQ96RM1 72 aa0.54□□□□□ -2.32
PGAP1-211ENST00000485830 SPRR2AP35326 72 aa0.53□□□□□ -2.32
PGAP1-211ENST00000485830 MUC17Q685J3 4493 aa0.53□□□□□ -2.33
PGAP1-211ENST00000485830 LRP2P98164 4655 aa0.52□□□□□ -2.33
PGAP1-211ENST00000485830 LRP1BQ9NZR2 4599 aa0.52□□□□□ -2.33
PGAP1-211ENST00000485830 SPRR2EP22531 72 aa0.51□□□□□ -2.33
PGAP1-211ENST00000485830 STARD9Q9P2P6 4700 aa0.5□□□□□ -2.33
PGAP1-211ENST00000485830 MT1EP04732 61 aa0.49□□□□□ -2.33
PGAP1-211ENST00000485830 SPRR2GQ9BYE4 73 aa0.48□□□□□ -2.33
PGAP1-211ENST00000485830 MT1XP80297 61 aa0.46□□□□□ -2.34
PGAP1-211ENST00000485830 MT1LQ93083 61 aa0.46□□□□□ -2.34
PGAP1-211ENST00000485830 KRTAP19-2Q3LHN2 52 aa0.45□□□□□ -2.34
PGAP1-211ENST00000485830 PHGR1C9JFL3 82 aa0.44□□□□□ -2.34
PGAP1-211ENST00000485830 MT1HP80294 61 aa0.43□□□□□ -2.34
PGAP1-211ENST00000485830 KRTAP19-8Q3LI54 63 aa0.42□□□□□ -2.34
PGAP1-211ENST00000485830 KRTAP19-7Q3SYF9 63 aa0.42□□□□□ -2.34
PGAP1-211ENST00000485830 KRTAP19-6Q3LI70 58 aa0.41□□□□□ -2.34
PGAP1-211ENST00000485830 MT1BP07438 61 aa0.38□□□□□ -2.35
PGAP1-211ENST00000485830 MT1GP13640 62 aa0.38□□□□□ -2.35
PGAP1-211ENST00000485830 KRTAP6-1Q3LI64 71 aa0.36□□□□□ -2.35
PGAP1-211ENST00000485830 MT4P47944 62 aa0.35□□□□□ -2.35
PGAP1-211ENST00000485830 MT1MQ8N339 61 aa0.32□□□□□ -2.36
PGAP1-211ENST00000485830 MT2AP02795 61 aa0.29□□□□□ -2.36
PGAP1-211ENST00000485830 MT1FP04733 61 aa0.26□□□□□ -2.37
PGAP1-211ENST00000485830 MT1HL1P0DM35 61 aa0.23□□□□□ -2.37
PGAP1-211ENST00000485830 KRTAP20-2Q3LI61 65 aa0.23□□□□□ -2.37
Retrieved 78 of 20,778 RNA–protein pairs in 46 ms