RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 A6NN06 94 aa2.49□□□□□ -2.01
NHLRC3-205ENST00000485407 H0YAA0 97 aa2.49□□□□□ -2.01
NHLRC3-205ENST00000485407 SERP2Q8N6R1 65 aa2.49□□□□□ -2.01
NHLRC3-205ENST00000485407 DMAC1Q96GE9 116 aa2.49□□□□□ -2.01
NHLRC3-205ENST00000485407 ACYP2P14621 99 aa2.47□□□□□ -2.01
NHLRC3-205ENST00000485407 LCE3AQ5TA76 89 aa2.47□□□□□ -2.01
NHLRC3-205ENST00000485407 CRIPTQ9P021 101 aa2.47□□□□□ -2.01
NHLRC3-205ENST00000485407 COX7CP15954 63 aa2.46□□□□□ -2.02
NHLRC3-205ENST00000485407 C20orf197Q8N268 126 aa2.45□□□□□ -2.02
NHLRC3-205ENST00000485407 CDC42SE1Q9NRR8 79 aa2.45□□□□□ -2.02
NHLRC3-205ENST00000485407 OBSCNQ5VST9 7968 aa2.45□□□□□ -2.02
NHLRC3-205ENST00000485407 SPRR2GQ9BYE4 73 aa2.44□□□□□ -2.02
NHLRC3-205ENST00000485407 SNURFQ9Y675 71 aa2.44□□□□□ -2.02
NHLRC3-205ENST00000485407 SPTSSBQ8NFR3 76 aa2.43□□□□□ -2.02
NHLRC3-205ENST00000485407 KRTAP19-8Q3LI54 63 aa2.4□□□□□ -2.03
NHLRC3-205ENST00000485407 CHKB-CPT1BH3BT56 60 aa2.39□□□□□ -2.03
NHLRC3-205ENST00000485407 CCDC179H3BU77 68 aa2.39□□□□□ -2.03
NHLRC3-205ENST00000485407 KRTAP5-10Q6L8G5 202 aa2.39□□□□□ -2.03
NHLRC3-205ENST00000485407 LCE3DQ9BYE3 92 aa2.39□□□□□ -2.03
NHLRC3-205ENST00000485407 H7BZZ5 65 aa2.38□□□□□ -2.03
NHLRC3-205ENST00000485407 Q5VV11 94 aa2.38□□□□□ -2.03
NHLRC3-205ENST00000485407 KRTAP5-7Q6L8G8 165 aa2.38□□□□□ -2.03
NHLRC3-205ENST00000485407 DSTQ03001 7570 aaKnown RBP2.37□□□□□ -2.03
NHLRC3-205ENST00000485407 KRTAP13-4Q3LI77 160 aa2.36□□□□□ -2.03
NHLRC3-205ENST00000485407 MT1BP07438 61 aa2.35□□□□□ -2.03
NHLRC3-205ENST00000485407 SERP1Q9Y6X1 66 aa2.35□□□□□ -2.03
NHLRC3-205ENST00000485407 M0QZ58 72 aa2.33□□□□□ -2.04
NHLRC3-205ENST00000485407 KRTAP5-2Q701N4 177 aa2.33□□□□□ -2.04
NHLRC3-205ENST00000485407 CYSTM1Q9H1C7 97 aa2.33□□□□□ -2.04
NHLRC3-205ENST00000485407 SPRR2EP22531 72 aa2.32□□□□□ -2.04
NHLRC3-205ENST00000485407 SPRR2BP35325 72 aa2.32□□□□□ -2.04
NHLRC3-205ENST00000485407 SPRR2AP35326 72 aa2.32□□□□□ -2.04
NHLRC3-205ENST00000485407 ATP5EP56381 51 aaPredicted RBP2.32□□□□□ -2.04
NHLRC3-205ENST00000485407 HMCN1Q96RW7 5635 aa2.32□□□□□ -2.04
NHLRC3-205ENST00000485407 INE1O15225 51 aa2.31□□□□□ -2.04
NHLRC3-205ENST00000485407 PLAC4Q8WY50 150 aa2.3□□□□□ -2.04
NHLRC3-205ENST00000485407 AHNAKQ09666 5890 aaKnown RBP2.29□□□□□ -2.04
NHLRC3-205ENST00000485407 KRTAP5-5Q701N2 237 aaPredicted RBP2.29□□□□□ -2.04
NHLRC3-205ENST00000485407 KRTAP12-1P59990 96 aa2.27□□□□□ -2.05
NHLRC3-205ENST00000485407 SPRR2DP22532 72 aa2.25□□□□□ -2.05
NHLRC3-205ENST00000485407 A0A1B0GU69 56 aa2.24□□□□□ -2.05
NHLRC3-205ENST00000485407 SPRR2FQ96RM1 72 aa2.24□□□□□ -2.05
NHLRC3-205ENST00000485407 MT1XP80297 61 aa2.23□□□□□ -2.05
NHLRC3-205ENST00000485407 PRR15LQ9BU68 103 aa2.23□□□□□ -2.05
NHLRC3-205ENST00000485407 PP632Q6XCG6 107 aa2.21□□□□□ -2.06
NHLRC3-205ENST00000485407 LINC01558Q9Y6Z2 57 aa2.21□□□□□ -2.06
NHLRC3-205ENST00000485407 MUC5BQ9HC84 5762 aaPredicted RBP2.21□□□□□ -2.06
NHLRC3-205ENST00000485407 SPATA8Q6RVD6 105 aa2.18□□□□□ -2.06
NHLRC3-205ENST00000485407 LCE1CQ5T751 118 aa2.16□□□□□ -2.06
NHLRC3-205ENST00000485407 LCE1BQ5T7P3 118 aa2.16□□□□□ -2.06
NHLRC3-205ENST00000485407 A0A0D9SG42 100 aa2.15□□□□□ -2.07
NHLRC3-205ENST00000485407 UQCR11O14957 56 aa2.15□□□□□ -2.07
NHLRC3-205ENST00000485407 KRTAP8-1Q8IUC2 63 aa2.12□□□□□ -2.07
NHLRC3-205ENST00000485407 MUC5ACP98088 5654 aa2.12□□□□□ -2.07
NHLRC3-205ENST00000485407 KRTAP12-3P60328 96 aa2.07□□□□□ -2.08
NHLRC3-205ENST00000485407 TNP1P09430 55 aa2.05□□□□□ -2.08
NHLRC3-205ENST00000485407 C10orf95Q9H7T3 257 aa2.04□□□□□ -2.08
NHLRC3-205ENST00000485407 MT4P47944 62 aa2.01□□□□□ -2.09
NHLRC3-205ENST00000485407 KRTAP19-7Q3SYF9 63 aa2□□□□□ -2.09
NHLRC3-205ENST00000485407 MT1EP04732 61 aa1.97□□□□□ -2.09
NHLRC3-205ENST00000485407 KRTAP19-3Q7Z4W3 81 aa1.96□□□□□ -2.1
NHLRC3-205ENST00000485407 KRTAP19-5Q3LI72 72 aa1.95□□□□□ -2.1
NHLRC3-205ENST00000485407 MT1GP13640 62 aa1.94□□□□□ -2.1
NHLRC3-205ENST00000485407 KRTAP12-4P60329 112 aa1.93□□□□□ -2.1
NHLRC3-205ENST00000485407 KRTAP5-8O75690 187 aa1.91□□□□□ -2.1
NHLRC3-205ENST00000485407 MT1LQ93083 61 aa1.91□□□□□ -2.1
NHLRC3-205ENST00000485407 MT1MQ8N339 61 aa1.87□□□□□ -2.11
NHLRC3-205ENST00000485407 KRTAP20-2Q3LI61 65 aa1.77□□□□□ -2.13
NHLRC3-205ENST00000485407 SYNE1Q8NF91 8797 aaKnown RBP1.75□□□□□ -2.13
NHLRC3-205ENST00000485407 MUC19Q7Z5P9 8384 aa1.71□□□□□ -2.14
NHLRC3-205ENST00000485407 MT1AP04731 61 aa1.63□□□□□ -2.15
NHLRC3-205ENST00000485407 KRTAP6-1Q3LI64 71 aa1.59□□□□□ -2.15
NHLRC3-205ENST00000485407 KRTAP21-2Q3LI59 83 aa1.56□□□□□ -2.16
NHLRC3-205ENST00000485407 KRTAP6-2Q3LI66 62 aa1.51□□□□□ -2.17
NHLRC3-205ENST00000485407 PHGR1C9JFL3 82 aa1.42□□□□□ -2.18
NHLRC3-205ENST00000485407 KRTAP21-1Q3LI58 79 aa1.07□□□□□ -2.24
NHLRC3-205ENST00000485407 PRM1P04553 51 aa0.96□□□□□ -2.26
NHLRC3-205ENST00000485407 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 8.6 ms