RNA–Protein interactions for RNA: ENST00000485248.2

CAPN13-206, Transcript of calpain 13, humanhuman

TSL 3

Gene CAPN13, Length 710 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-206ENST00000485248 KRTAP4-9Q9BYQ8 210 aa3.02□□□□□ -1.93
CAPN13-206ENST00000485248 KRTAP4-7Q9BYR0 210 aa3□□□□□ -1.93
CAPN13-206ENST00000485248 P0C880 135 aa2.99□□□□□ -1.93
CAPN13-206ENST00000485248 KRTAP4-11Q9BYQ6 195 aa2.95□□□□□ -1.94
CAPN13-206ENST00000485248 KRTAP13-4Q3LI77 160 aa2.93□□□□□ -1.94
CAPN13-206ENST00000485248 KRTAP10-5P60370 271 aa2.91□□□□□ -1.94
CAPN13-206ENST00000485248 CRIPTQ9P021 101 aa2.9□□□□□ -1.95
CAPN13-206ENST00000485248 LCE1FQ5T754 118 aa2.89□□□□□ -1.95
CAPN13-206ENST00000485248 SPINT4Q6UDR6 99 aa2.89□□□□□ -1.95
CAPN13-206ENST00000485248 S4R3F8 94 aa2.89□□□□□ -1.95
CAPN13-206ENST00000485248 M0QZ58 72 aa2.88□□□□□ -1.95
CAPN13-206ENST00000485248 KRTAP4-2Q9BYR5 136 aa2.88□□□□□ -1.95
CAPN13-206ENST00000485248 KRTAP12-1P59990 96 aa2.87□□□□□ -1.95
CAPN13-206ENST00000485248 KRTAP8-1Q8IUC2 63 aa2.87□□□□□ -1.95
CAPN13-206ENST00000485248 DSTQ03001 7570 aaKnown RBP2.86□□□□□ -1.95
CAPN13-206ENST00000485248 SPRR5A0A1B0GTR4 108 aa2.85□□□□□ -1.95
CAPN13-206ENST00000485248 KRTAP12-2P59991 146 aa2.85□□□□□ -1.95
CAPN13-206ENST00000485248 A0A0D9SG42 100 aa2.83□□□□□ -1.96
CAPN13-206ENST00000485248 MT1BP07438 61 aa2.82□□□□□ -1.96
CAPN13-206ENST00000485248 C10orf95Q9H7T3 257 aa2.82□□□□□ -1.96
CAPN13-206ENST00000485248 KRTAP5-10Q6L8G5 202 aa2.76□□□□□ -1.97
CAPN13-206ENST00000485248 PRO2289Q9P1D8 64 aa2.76□□□□□ -1.97
CAPN13-206ENST00000485248 AHNAK2Q8IVF2 5795 aa2.75□□□□□ -1.97
CAPN13-206ENST00000485248 KRTAP19-8Q3LI54 63 aa2.75□□□□□ -1.97
CAPN13-206ENST00000485248 KRTAP5-7Q6L8G8 165 aa2.75□□□□□ -1.97
CAPN13-206ENST00000485248 PP632Q6XCG6 107 aa2.74□□□□□ -1.97
CAPN13-206ENST00000485248 PLAC4Q8WY50 150 aa2.72□□□□□ -1.97
CAPN13-206ENST00000485248 SPRR2GQ9BYE4 73 aa2.71□□□□□ -1.98
CAPN13-206ENST00000485248 KRTAP10-12P60413 245 aa2.7□□□□□ -1.98
CAPN13-206ENST00000485248 MT4P47944 62 aa2.69□□□□□ -1.98
CAPN13-206ENST00000485248 LCE3CQ5T5A8 94 aa2.68□□□□□ -1.98
CAPN13-206ENST00000485248 HMCN1Q96RW7 5635 aa2.67□□□□□ -1.98
CAPN13-206ENST00000485248 R4GN34 69 aa2.66□□□□□ -1.98
CAPN13-206ENST00000485248 KRTAP5-3Q6L8H2 238 aa2.6□□□□□ -1.99
CAPN13-206ENST00000485248 TNP1P09430 55 aa2.53□□□□□ -2
CAPN13-206ENST00000485248 MT1XP80297 61 aa2.53□□□□□ -2
CAPN13-206ENST00000485248 AHNAKQ09666 5890 aaKnown RBP2.47□□□□□ -2.01
CAPN13-206ENST00000485248 LCE3EQ5T5B0 92 aa2.45□□□□□ -2.02
CAPN13-206ENST00000485248 INE1O15225 51 aa2.43□□□□□ -2.02
CAPN13-206ENST00000485248 KRTAP10-7P60409 375 aaPredicted RBP2.43□□□□□ -2.02
CAPN13-206ENST00000485248 KRTAP19-3Q7Z4W3 81 aa2.42□□□□□ -2.02
CAPN13-206ENST00000485248 KRTAP5-4Q6L8H1 288 aa2.39□□□□□ -2.03
CAPN13-206ENST00000485248 MUC5ACP98088 5654 aa2.36□□□□□ -2.03
CAPN13-206ENST00000485248 KRTAP20-2Q3LI61 65 aa2.33□□□□□ -2.04
CAPN13-206ENST00000485248 LCE3AQ5TA76 89 aa2.32□□□□□ -2.04
CAPN13-206ENST00000485248 MT1GP13640 62 aa2.31□□□□□ -2.04
CAPN13-206ENST00000485248 MUC5BQ9HC84 5762 aaPredicted RBP2.31□□□□□ -2.04
CAPN13-206ENST00000485248 MT1EP04732 61 aa2.3□□□□□ -2.04
CAPN13-206ENST00000485248 KRTAP12-4P60329 112 aa2.26□□□□□ -2.05
CAPN13-206ENST00000485248 KRTAP19-7Q3SYF9 63 aa2.25□□□□□ -2.05
CAPN13-206ENST00000485248 KRTAP5-8O75690 187 aa2.24□□□□□ -2.05
CAPN13-206ENST00000485248 KRTAP12-3P60328 96 aa2.24□□□□□ -2.05
CAPN13-206ENST00000485248 LCE1EQ5T753 118 aa2.24□□□□□ -2.05
CAPN13-206ENST00000485248 MT1MQ8N339 61 aa2.23□□□□□ -2.05
CAPN13-206ENST00000485248 LCE3DQ9BYE3 92 aa2.16□□□□□ -2.06
CAPN13-206ENST00000485248 KRTAP4-3Q9BYR4 195 aa2.15□□□□□ -2.07
CAPN13-206ENST00000485248 KRTAP9-6A8MVA2 160 aa2.13□□□□□ -2.07
CAPN13-206ENST00000485248 KRTAP19-5Q3LI72 72 aa2.11□□□□□ -2.07
CAPN13-206ENST00000485248 MT1LQ93083 61 aa2.11□□□□□ -2.07
CAPN13-206ENST00000485248 SYNE1Q8NF91 8797 aaKnown RBP2.1□□□□□ -2.07
CAPN13-206ENST00000485248 KRTAP5-2Q701N4 177 aa2.08□□□□□ -2.08
CAPN13-206ENST00000485248 KRTAP5-5Q701N2 237 aaPredicted RBP2.04□□□□□ -2.08
CAPN13-206ENST00000485248 KRTAP5-11Q6L8G4 156 aa2.01□□□□□ -2.09
CAPN13-206ENST00000485248 OBSCNQ5VST9 7968 aa1.98□□□□□ -2.09
CAPN13-206ENST00000485248 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.88□□□□□ -2.11
CAPN13-206ENST00000485248 KRTAP5-1Q6L8H4 278 aa1.87□□□□□ -2.11
CAPN13-206ENST00000485248 KRTAP6-2Q3LI66 62 aa1.85□□□□□ -2.11
CAPN13-206ENST00000485248 MT1AP04731 61 aa1.8□□□□□ -2.12
CAPN13-206ENST00000485248 KRTAP6-1Q3LI64 71 aa1.79□□□□□ -2.12
CAPN13-206ENST00000485248 PHGR1C9JFL3 82 aa1.71□□□□□ -2.14
CAPN13-206ENST00000485248 LCE1BQ5T7P3 118 aa1.67□□□□□ -2.14
CAPN13-206ENST00000485248 PRM1P04553 51 aa1.59□□□□□ -2.15
CAPN13-206ENST00000485248 KRTAP4-4Q9BYR3 166 aa1.59□□□□□ -2.15
CAPN13-206ENST00000485248 LCE1CQ5T751 118 aa1.53□□□□□ -2.16
CAPN13-206ENST00000485248 KRTAP21-1Q3LI58 79 aa1.31□□□□□ -2.2
CAPN13-206ENST00000485248 MUC19Q7Z5P9 8384 aa1.26□□□□□ -2.21
CAPN13-206ENST00000485248 KRTAP21-2Q3LI59 83 aa1.16□□□□□ -2.22
CAPN13-206ENST00000485248 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 64.9 ms