RNA–Protein interactions for RNA: ENST00000484101.5

UFD1-208, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 751 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-208ENST00000484101 KRTAP2-1Q9BYU5 128 aa3.85□□□□□ -1.79
UFD1-208ENST00000484101 LCE3AQ5TA76 89 aa3.82□□□□□ -1.8
UFD1-208ENST00000484101 KRTAP8-1Q8IUC2 63 aa3.82□□□□□ -1.8
UFD1-208ENST00000484101 KRTAP10-7P60409 375 aaPredicted RBP3.75□□□□□ -1.81
UFD1-208ENST00000484101 KRTAP12-3P60328 96 aa3.71□□□□□ -1.82
UFD1-208ENST00000484101 LUZP6Q538Z0 58 aa3.71□□□□□ -1.82
UFD1-208ENST00000484101 SPRR5A0A1B0GTR4 108 aa3.69□□□□□ -1.82
UFD1-208ENST00000484101 NDUFAF8A1L188 74 aa3.68□□□□□ -1.82
UFD1-208ENST00000484101 SPRR2EP22531 72 aa3.67□□□□□ -1.82
UFD1-208ENST00000484101 SPRR2BP35325 72 aa3.67□□□□□ -1.82
UFD1-208ENST00000484101 SPRR2AP35326 72 aa3.67□□□□□ -1.82
UFD1-208ENST00000484101 KRTAP9-4Q9BYQ2 154 aa3.64□□□□□ -1.83
UFD1-208ENST00000484101 KRTAP19-5Q3LI72 72 aa3.58□□□□□ -1.84
UFD1-208ENST00000484101 SPRR2FQ96RM1 72 aa3.57□□□□□ -1.84
UFD1-208ENST00000484101 SPRR2DP22532 72 aa3.56□□□□□ -1.84
UFD1-208ENST00000484101 LCE1AQ5T7P2 110 aa3.56□□□□□ -1.84
UFD1-208ENST00000484101 LCE4AQ5TA78 99 aa3.55□□□□□ -1.84
UFD1-208ENST00000484101 LCE3BQ5TA77 95 aa3.52□□□□□ -1.85
UFD1-208ENST00000484101 LCE5AQ5TCM9 118 aa3.51□□□□□ -1.85
UFD1-208ENST00000484101 KRTAP4-8A0A0G2JLE6 195 aa3.5□□□□□ -1.85
UFD1-208ENST00000484101 KRTAP19-7Q3SYF9 63 aa3.5□□□□□ -1.85
UFD1-208ENST00000484101 KRTAP9-9Q9BYP9 154 aa3.5□□□□□ -1.85
UFD1-208ENST00000484101 KRTAP4-8Q9BYQ9 185 aa3.5□□□□□ -1.85
UFD1-208ENST00000484101 KRTAP4-12Q9BQ66 201 aa3.49□□□□□ -1.85
UFD1-208ENST00000484101 LCE3CQ5T5A8 94 aa3.48□□□□□ -1.85
UFD1-208ENST00000484101 KRTAP4-9Q9BYQ8 210 aa3.47□□□□□ -1.85
UFD1-208ENST00000484101 MT1EP04732 61 aa3.45□□□□□ -1.86
UFD1-208ENST00000484101 LOC100996750A0A140TA64 210 aa3.43□□□□□ -1.86
UFD1-208ENST00000484101 KRTAP4-6Q9BYQ5 205 aa3.43□□□□□ -1.86
UFD1-208ENST00000484101 DSTQ03001 7570 aaKnown RBP3.42□□□□□ -1.86
UFD1-208ENST00000484101 KRTAP5-10Q6L8G5 202 aa3.41□□□□□ -1.86
UFD1-208ENST00000484101 MT1LQ93083 61 aa3.41□□□□□ -1.86
UFD1-208ENST00000484101 AHNAK2Q8IVF2 5795 aa3.4□□□□□ -1.87
UFD1-208ENST00000484101 HMCN1Q96RW7 5635 aa3.36□□□□□ -1.87
UFD1-208ENST00000484101 KRTAP5-7Q6L8G8 165 aa3.36□□□□□ -1.87
UFD1-208ENST00000484101 MT3P25713 68 aa3.32□□□□□ -1.88
UFD1-208ENST00000484101 MT1GP13640 62 aa3.31□□□□□ -1.88
UFD1-208ENST00000484101 LCE1DQ5T752 114 aa3.31□□□□□ -1.88
UFD1-208ENST00000484101 KRTAP19-3Q7Z4W3 81 aa3.31□□□□□ -1.88
UFD1-208ENST00000484101 MT1MQ8N339 61 aa3.24□□□□□ -1.89
UFD1-208ENST00000484101 KRTAP9-6A8MVA2 160 aa3.2□□□□□ -1.9
UFD1-208ENST00000484101 KRTAP4-7Q9BYR0 210 aa3.2□□□□□ -1.9
UFD1-208ENST00000484101 MT4P47944 62 aa3.17□□□□□ -1.9
UFD1-208ENST00000484101 KRTAP5-3Q6L8H2 238 aa3.17□□□□□ -1.9
UFD1-208ENST00000484101 INE1O15225 51 aa3.13□□□□□ -1.91
UFD1-208ENST00000484101 KRTAP4-3Q9BYR4 195 aa3.06□□□□□ -1.92
UFD1-208ENST00000484101 AHNAKQ09666 5890 aaKnown RBP2.99□□□□□ -1.93
UFD1-208ENST00000484101 KRTAP5-4Q6L8H1 288 aa2.95□□□□□ -1.94
UFD1-208ENST00000484101 MT1AP04731 61 aa2.93□□□□□ -1.94
UFD1-208ENST00000484101 MUC5ACP98088 5654 aa2.93□□□□□ -1.94
UFD1-208ENST00000484101 KRTAP5-5Q701N2 237 aaPredicted RBP2.92□□□□□ -1.94
UFD1-208ENST00000484101 KRTAP4-11Q9BYQ6 195 aa2.9□□□□□ -1.95
UFD1-208ENST00000484101 MUC5BQ9HC84 5762 aaPredicted RBP2.9□□□□□ -1.95
UFD1-208ENST00000484101 LCE1FQ5T754 118 aa2.88□□□□□ -1.95
UFD1-208ENST00000484101 KRTAP6-1Q3LI64 71 aa2.83□□□□□ -1.96
UFD1-208ENST00000484101 KRTAP20-2Q3LI61 65 aa2.82□□□□□ -1.96
UFD1-208ENST00000484101 KRTAP5-8O75690 187 aa2.73□□□□□ -1.97
UFD1-208ENST00000484101 KRTAP12-4P60329 112 aa2.72□□□□□ -1.97
UFD1-208ENST00000484101 KRTAP4-2Q9BYR5 136 aa2.68□□□□□ -1.98
UFD1-208ENST00000484101 LCE3DQ9BYE3 92 aa2.65□□□□□ -1.99
UFD1-208ENST00000484101 SYNE1Q8NF91 8797 aaKnown RBP2.62□□□□□ -1.99
UFD1-208ENST00000484101 LCE3EQ5T5B0 92 aa2.6□□□□□ -1.99
UFD1-208ENST00000484101 KRTAP6-2Q3LI66 62 aa2.59□□□□□ -1.99
UFD1-208ENST00000484101 KRTAP5-2Q701N4 177 aa2.56□□□□□ -2
UFD1-208ENST00000484101 OBSCNQ5VST9 7968 aa2.39□□□□□ -2.03
UFD1-208ENST00000484101 KRTAP5-1Q6L8H4 278 aa2.34□□□□□ -2.03
UFD1-208ENST00000484101 LCE1EQ5T753 118 aa2.31□□□□□ -2.04
UFD1-208ENST00000484101 PRM1P04553 51 aa2.3□□□□□ -2.04
UFD1-208ENST00000484101 LCE1CQ5T751 118 aa2.13□□□□□ -2.07
UFD1-208ENST00000484101 LCE1BQ5T7P3 118 aa2.13□□□□□ -2.07
UFD1-208ENST00000484101 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.03□□□□□ -2.08
UFD1-208ENST00000484101 PHGR1C9JFL3 82 aa2.01□□□□□ -2.09
UFD1-208ENST00000484101 KRTAP5-11Q6L8G4 156 aa1.92□□□□□ -2.1
UFD1-208ENST00000484101 KRTAP21-2Q3LI59 83 aa1.86□□□□□ -2.11
UFD1-208ENST00000484101 KRTAP4-4Q9BYR3 166 aa1.55□□□□□ -2.16
UFD1-208ENST00000484101 KRTAP21-1Q3LI58 79 aa1.52□□□□□ -2.17
UFD1-208ENST00000484101 MUC19Q7Z5P9 8384 aa1.51□□□□□ -2.17
UFD1-208ENST00000484101 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 96.9 ms