RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 V9GYY9 64 aa4.01□□□□□ -1.77
SMARCC1-205ENST00000483847 Q1T7F1 81 aa3.99□□□□□ -1.77
SMARCC1-205ENST00000483847 KRTAP5-4Q6L8H1 288 aa3.96□□□□□ -1.78
SMARCC1-205ENST00000483847 MT1GP13640 62 aa3.95□□□□□ -1.78
SMARCC1-205ENST00000483847 KRTAP5-3Q6L8H2 238 aa3.95□□□□□ -1.78
SMARCC1-205ENST00000483847 BRK1Q8WUW1 75 aa3.92□□□□□ -1.78
SMARCC1-205ENST00000483847 COA5Q86WW8 74 aa3.91□□□□□ -1.78
SMARCC1-205ENST00000483847 MT1MQ8N339 61 aa3.91□□□□□ -1.78
SMARCC1-205ENST00000483847 PP632Q6XCG6 107 aa3.89□□□□□ -1.79
SMARCC1-205ENST00000483847 PRAC1Q96KF2 57 aa3.89□□□□□ -1.79
SMARCC1-205ENST00000483847 SPRR5A0A1B0GTR4 108 aa3.88□□□□□ -1.79
SMARCC1-205ENST00000483847 KRTAP19-5Q3LI72 72 aa3.88□□□□□ -1.79
SMARCC1-205ENST00000483847 KRTAP4-3Q9BYR4 195 aa3.88□□□□□ -1.79
SMARCC1-205ENST00000483847 PSPHP1O15172 72 aa3.87□□□□□ -1.79
SMARCC1-205ENST00000483847 ACYP2P14621 99 aa3.87□□□□□ -1.79
SMARCC1-205ENST00000483847 PMAIP1Q13794 54 aa3.86□□□□□ -1.79
SMARCC1-205ENST00000483847 DMAC1Q96GE9 116 aa3.86□□□□□ -1.79
SMARCC1-205ENST00000483847 PRR15LQ9BU68 103 aa3.86□□□□□ -1.79
SMARCC1-205ENST00000483847 CAMK2N1Q7Z7J9 78 aa3.84□□□□□ -1.79
SMARCC1-205ENST00000483847 LINC01558Q9Y6Z2 57 aa3.84□□□□□ -1.79
SMARCC1-205ENST00000483847 CHKB-CPT1BH3BT56 60 aa3.83□□□□□ -1.8
SMARCC1-205ENST00000483847 MT1LQ93083 61 aa3.82□□□□□ -1.8
SMARCC1-205ENST00000483847 A0A0D9SG42 100 aa3.8□□□□□ -1.8
SMARCC1-205ENST00000483847 A6NED7 52 aa3.79□□□□□ -1.8
SMARCC1-205ENST00000483847 KRTAP13-4Q3LI77 160 aa3.78□□□□□ -1.8
SMARCC1-205ENST00000483847 KRTAP20-2Q3LI61 65 aa3.77□□□□□ -1.81
SMARCC1-205ENST00000483847 CDC42SE1Q9NRR8 79 aa3.76□□□□□ -1.81
SMARCC1-205ENST00000483847 SPTSSBQ8NFR3 76 aa3.73□□□□□ -1.81
SMARCC1-205ENST00000483847 A0A1B0GU69 56 aa3.72□□□□□ -1.81
SMARCC1-205ENST00000483847 KTN1-AS1Q86SY8 53 aa3.71□□□□□ -1.82
SMARCC1-205ENST00000483847 AHNAKQ09666 5890 aaKnown RBP3.68□□□□□ -1.82
SMARCC1-205ENST00000483847 SYNE1Q8NF91 8797 aaKnown RBP3.66□□□□□ -1.82
SMARCC1-205ENST00000483847 UQCR11O14957 56 aa3.66□□□□□ -1.82
SMARCC1-205ENST00000483847 A8MU10 97 aa3.65□□□□□ -1.83
SMARCC1-205ENST00000483847 SPATA8Q6RVD6 105 aa3.64□□□□□ -1.83
SMARCC1-205ENST00000483847 C10orf95Q9H7T3 257 aa3.63□□□□□ -1.83
SMARCC1-205ENST00000483847 MIR22HGQ0VDD5 57 aa3.62□□□□□ -1.83
SMARCC1-205ENST00000483847 KRTAP5-5Q701N2 237 aaPredicted RBP3.62□□□□□ -1.83
SMARCC1-205ENST00000483847 MUC5ACP98088 5654 aa3.6□□□□□ -1.83
SMARCC1-205ENST00000483847 KRTAP12-4P60329 112 aa3.59□□□□□ -1.83
SMARCC1-205ENST00000483847 LCE3AQ5TA76 89 aa3.59□□□□□ -1.83
SMARCC1-205ENST00000483847 SPINT4Q6UDR6 99 aa3.55□□□□□ -1.84
SMARCC1-205ENST00000483847 MUC5BQ9HC84 5762 aaPredicted RBP3.54□□□□□ -1.84
SMARCC1-205ENST00000483847 NDUFAF8A1L188 74 aa3.54□□□□□ -1.84
SMARCC1-205ENST00000483847 A0A1B0GU33 70 aa3.53□□□□□ -1.84
SMARCC1-205ENST00000483847 KRTAP12-1P59990 96 aa3.51□□□□□ -1.85
SMARCC1-205ENST00000483847 K7ERS5 55 aa3.49□□□□□ -1.85
SMARCC1-205ENST00000483847 MT3P25713 68 aa3.48□□□□□ -1.85
SMARCC1-205ENST00000483847 KRTAP5-8O75690 187 aa3.45□□□□□ -1.86
SMARCC1-205ENST00000483847 KRTAP12-3P60328 96 aa3.43□□□□□ -1.86
SMARCC1-205ENST00000483847 TNP1P09430 55 aa3.41□□□□□ -1.86
SMARCC1-205ENST00000483847 KRTAP5-2Q701N4 177 aa3.4□□□□□ -1.87
SMARCC1-205ENST00000483847 OBSCNQ5VST9 7968 aa3.39□□□□□ -1.87
SMARCC1-205ENST00000483847 LCE1FQ5T754 118 aa3.35□□□□□ -1.87
SMARCC1-205ENST00000483847 ROMO1P60602 79 aa3.33□□□□□ -1.88
SMARCC1-205ENST00000483847 KRTAP25-1Q3LHN0 102 aa3.31□□□□□ -1.88
SMARCC1-205ENST00000483847 KRTAP6-1Q3LI64 71 aa3.27□□□□□ -1.89
SMARCC1-205ENST00000483847 MT1AP04731 61 aa3.23□□□□□ -1.89
SMARCC1-205ENST00000483847 KRTAP6-2Q3LI66 62 aa3.2□□□□□ -1.9
SMARCC1-205ENST00000483847 LCE3CQ5T5A8 94 aa3.15□□□□□ -1.91
SMARCC1-205ENST00000483847 KRTAP5-1Q6L8H4 278 aa3.13□□□□□ -1.91
SMARCC1-205ENST00000483847 LUZP6Q538Z0 58 aa3.04□□□□□ -1.92
SMARCC1-205ENST00000483847 KRTAP9-6A8MVA2 160 aa3.01□□□□□ -1.93
SMARCC1-205ENST00000483847 LCE1EQ5T753 118 aa2.95□□□□□ -1.94
SMARCC1-205ENST00000483847 LCE3EQ5T5B0 92 aa2.89□□□□□ -1.95
SMARCC1-205ENST00000483847 KRTAP5-11Q6L8G4 156 aa2.87□□□□□ -1.95
SMARCC1-205ENST00000483847 LCE1BQ5T7P3 118 aa2.72□□□□□ -1.97
SMARCC1-205ENST00000483847 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.67□□□□□ -1.98
SMARCC1-205ENST00000483847 LCE1CQ5T751 118 aa2.62□□□□□ -1.99
SMARCC1-205ENST00000483847 INE1O15225 51 aa2.5□□□□□ -2.01
SMARCC1-205ENST00000483847 LCE3DQ9BYE3 92 aa2.45□□□□□ -2.02
SMARCC1-205ENST00000483847 PHGR1C9JFL3 82 aa2.43□□□□□ -2.02
SMARCC1-205ENST00000483847 KRTAP4-4Q9BYR3 166 aa2.27□□□□□ -2.05
SMARCC1-205ENST00000483847 KRTAP21-2Q3LI59 83 aa2.16□□□□□ -2.06
SMARCC1-205ENST00000483847 MUC19Q7Z5P9 8384 aa2.14□□□□□ -2.07
SMARCC1-205ENST00000483847 KRTAP21-1Q3LI58 79 aa1.82□□□□□ -2.12
SMARCC1-205ENST00000483847 PRM1P04553 51 aa1.73□□□□□ -2.13
SMARCC1-205ENST00000483847 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 130.1 ms