RNA–Protein interactions for RNA: ENST00000483560.1

SNX12-204, Transcript of sorting nexin 12, humanhuman

TSL 5

Gene SNX12, Length 700 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-204ENST00000483560 KRTAP2-4Q9BYR9 128 aa2.86□□□□□ -1.95
SNX12-204ENST00000483560 KRTAP19-8Q3LI54 63 aa2.85□□□□□ -1.95
SNX12-204ENST00000483560 DMAC1Q96GE9 116 aa2.85□□□□□ -1.95
SNX12-204ENST00000483560 PRO2289Q9P1D8 64 aa2.85□□□□□ -1.95
SNX12-204ENST00000483560 MT1BP07438 61 aa2.84□□□□□ -1.95
SNX12-204ENST00000483560 LCE3EQ5T5B0 92 aa2.82□□□□□ -1.96
SNX12-204ENST00000483560 SNURFQ9Y675 71 aa2.82□□□□□ -1.96
SNX12-204ENST00000483560 H7BZZ5 65 aa2.81□□□□□ -1.96
SNX12-204ENST00000483560 CYSTM1Q9H1C7 97 aa2.79□□□□□ -1.96
SNX12-204ENST00000483560 KRTAP12-2P59991 146 aa2.77□□□□□ -1.97
SNX12-204ENST00000483560 MUC12Q9UKN1 5478 aa2.77□□□□□ -1.97
SNX12-204ENST00000483560 KRTAP5-9P26371 169 aa2.76□□□□□ -1.97
SNX12-204ENST00000483560 KRTAP2-1Q9BYU5 128 aa2.76□□□□□ -1.97
SNX12-204ENST00000483560 KMT2DO14686 5537 aa2.73□□□□□ -1.97
SNX12-204ENST00000483560 SPRR2EP22531 72 aa2.73□□□□□ -1.97
SNX12-204ENST00000483560 SPRR2BP35325 72 aa2.73□□□□□ -1.97
SNX12-204ENST00000483560 SPRR2AP35326 72 aa2.73□□□□□ -1.97
SNX12-204ENST00000483560 MDN1Q9NU22 5596 aa2.7□□□□□ -1.98
SNX12-204ENST00000483560 KRTAP5-1Q6L8H4 278 aa2.7□□□□□ -1.98
SNX12-204ENST00000483560 KRTAP8-1Q8IUC2 63 aa2.7□□□□□ -1.98
SNX12-204ENST00000483560 MT1XP80297 61 aa2.69□□□□□ -1.98
SNX12-204ENST00000483560 COA5Q86WW8 74 aa2.69□□□□□ -1.98
SNX12-204ENST00000483560 SPRR2FQ96RM1 72 aa2.69□□□□□ -1.98
SNX12-204ENST00000483560 A0A0D9SG42 100 aa2.67□□□□□ -1.98
SNX12-204ENST00000483560 GPR98Q8WXG9 6306 aa2.66□□□□□ -1.98
SNX12-204ENST00000483560 SPRR2DP22532 72 aa2.65□□□□□ -1.99
SNX12-204ENST00000483560 A0A1B0GU69 56 aa2.61□□□□□ -1.99
SNX12-204ENST00000483560 SPATA8Q6RVD6 105 aa2.6□□□□□ -1.99
SNX12-204ENST00000483560 KRTAP13-4Q3LI77 160 aa2.59□□□□□ -1.99
SNX12-204ENST00000483560 PRR15LQ9BU68 103 aa2.58□□□□□ -2
SNX12-204ENST00000483560 INE1O15225 51 aa2.57□□□□□ -2
SNX12-204ENST00000483560 LINC01558Q9Y6Z2 57 aa2.57□□□□□ -2
SNX12-204ENST00000483560 UQCR11O14957 56 aa2.55□□□□□ -2
SNX12-204ENST00000483560 KRTAP5-4Q6L8H1 288 aa2.55□□□□□ -2
SNX12-204ENST00000483560 KRTAP4-4Q9BYR3 166 aa2.55□□□□□ -2
SNX12-204ENST00000483560 LCE3AQ5TA76 89 aa2.54□□□□□ -2
SNX12-204ENST00000483560 KRTAP12-1P59990 96 aa2.48□□□□□ -2.01
SNX12-204ENST00000483560 DSTQ03001 7570 aaKnown RBP2.46□□□□□ -2.02
SNX12-204ENST00000483560 TNP1P09430 55 aa2.45□□□□□ -2.02
SNX12-204ENST00000483560 KRTAP19-5Q3LI72 72 aa2.41□□□□□ -2.02
SNX12-204ENST00000483560 MT1EP04732 61 aa2.4□□□□□ -2.03
SNX12-204ENST00000483560 PP632Q6XCG6 107 aa2.4□□□□□ -2.03
SNX12-204ENST00000483560 KRTAP19-3Q7Z4W3 81 aa2.39□□□□□ -2.03
SNX12-204ENST00000483560 OBSCNQ5VST9 7968 aa2.38□□□□□ -2.03
SNX12-204ENST00000483560 KRTAP19-7Q3SYF9 63 aa2.38□□□□□ -2.03
SNX12-204ENST00000483560 MT4P47944 62 aa2.37□□□□□ -2.03
SNX12-204ENST00000483560 SPRR5A0A1B0GTR4 108 aa2.36□□□□□ -2.03
SNX12-204ENST00000483560 C10orf95Q9H7T3 257 aa2.36□□□□□ -2.03
SNX12-204ENST00000483560 MT1GP13640 62 aa2.34□□□□□ -2.03
SNX12-204ENST00000483560 KRTAP5-10Q6L8G5 202 aa2.33□□□□□ -2.04
SNX12-204ENST00000483560 KRTAP5-5Q701N2 237 aaPredicted RBP2.33□□□□□ -2.04
SNX12-204ENST00000483560 LCE3DQ9BYE3 92 aa2.33□□□□□ -2.04
SNX12-204ENST00000483560 KRTAP4-3Q9BYR4 195 aa2.33□□□□□ -2.04
SNX12-204ENST00000483560 KRTAP12-3P60328 96 aa2.29□□□□□ -2.04
SNX12-204ENST00000483560 KRTAP5-7Q6L8G8 165 aa2.29□□□□□ -2.04
SNX12-204ENST00000483560 MT1LQ93083 61 aa2.29□□□□□ -2.04
SNX12-204ENST00000483560 MT1MQ8N339 61 aa2.28□□□□□ -2.04
SNX12-204ENST00000483560 HMCN1Q96RW7 5635 aa2.24□□□□□ -2.05
SNX12-204ENST00000483560 AHNAK2Q8IVF2 5795 aa2.22□□□□□ -2.05
SNX12-204ENST00000483560 LCE1CQ5T751 118 aa2.2□□□□□ -2.06
SNX12-204ENST00000483560 LCE1BQ5T7P3 118 aa2.2□□□□□ -2.06
SNX12-204ENST00000483560 KRTAP12-4P60329 112 aa2.12□□□□□ -2.07
SNX12-204ENST00000483560 KRTAP20-2Q3LI61 65 aa2.06□□□□□ -2.08
SNX12-204ENST00000483560 KRTAP5-2Q701N4 177 aa2.04□□□□□ -2.08
SNX12-204ENST00000483560 AHNAKQ09666 5890 aaKnown RBP1.97□□□□□ -2.09
SNX12-204ENST00000483560 MT1AP04731 61 aa1.95□□□□□ -2.1
SNX12-204ENST00000483560 MUC5ACP98088 5654 aa1.95□□□□□ -2.1
SNX12-204ENST00000483560 SYNE1Q8NF91 8797 aaKnown RBP1.94□□□□□ -2.1
SNX12-204ENST00000483560 KRTAP5-8O75690 187 aa1.94□□□□□ -2.1
SNX12-204ENST00000483560 KRTAP6-1Q3LI64 71 aa1.93□□□□□ -2.1
SNX12-204ENST00000483560 KRTAP6-2Q3LI66 62 aa1.89□□□□□ -2.11
SNX12-204ENST00000483560 MUC5BQ9HC84 5762 aaPredicted RBP1.85□□□□□ -2.11
SNX12-204ENST00000483560 MUC19Q7Z5P9 8384 aa1.74□□□□□ -2.13
SNX12-204ENST00000483560 KRTAP21-2Q3LI59 83 aa1.55□□□□□ -2.16
SNX12-204ENST00000483560 PHGR1C9JFL3 82 aa1.43□□□□□ -2.18
SNX12-204ENST00000483560 PRM1P04553 51 aa1.11□□□□□ -2.23
SNX12-204ENST00000483560 KRTAP21-1Q3LI58 79 aa1.08□□□□□ -2.24
SNX12-204ENST00000483560 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 6.3 ms