RNA–Protein interactions for RNA: ENST00000483148.5

APTX-226, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,764 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-226ENST00000483148 KRTAP4-11Q9BYQ6 195 aa4.49□□□□□ -1.69
APTX-226ENST00000483148 LCE5AQ5TCM9 118 aa4.45□□□□□ -1.7
APTX-226ENST00000483148 TNP1P09430 55 aa4.43□□□□□ -1.7
APTX-226ENST00000483148 INE1O15225 51 aa4.41□□□□□ -1.7
APTX-226ENST00000483148 NEBP20929 6669 aa4.4□□□□□ -1.71
APTX-226ENST00000483148 KRTAP20-1Q3LI63 56 aa4.35□□□□□ -1.71
APTX-226ENST00000483148 MUC12Q9UKN1 5478 aa4.25□□□□□ -1.73
APTX-226ENST00000483148 SPRR2GQ9BYE4 73 aa4.22□□□□□ -1.73
APTX-226ENST00000483148 KRTAP5-9P26371 169 aa4.16□□□□□ -1.74
APTX-226ENST00000483148 KRTAP2-3P0C7H8 128 aa4.15□□□□□ -1.74
APTX-226ENST00000483148 KRTAP19-8Q3LI54 63 aa4.15□□□□□ -1.74
APTX-226ENST00000483148 KRTAP2-4Q9BYR9 128 aa4.15□□□□□ -1.74
APTX-226ENST00000483148 MT1BP07438 61 aa4.11□□□□□ -1.75
APTX-226ENST00000483148 KMT2DO14686 5537 aa4.1□□□□□ -1.75
APTX-226ENST00000483148 MDN1Q9NU22 5596 aa4.1□□□□□ -1.75
APTX-226ENST00000483148 LCE3AQ5TA76 89 aa4.07□□□□□ -1.76
APTX-226ENST00000483148 KRTAP10-5P60370 271 aa4.06□□□□□ -1.76
APTX-226ENST00000483148 KRTAP8-1Q8IUC2 63 aa4.04□□□□□ -1.76
APTX-226ENST00000483148 KRTAP2-2Q9BYT5 123 aa3.99□□□□□ -1.77
APTX-226ENST00000483148 KRTAP2-1Q9BYU5 128 aa3.99□□□□□ -1.77
APTX-226ENST00000483148 SPRR2EP22531 72 aa3.98□□□□□ -1.77
APTX-226ENST00000483148 SPRR2BP35325 72 aa3.98□□□□□ -1.77
APTX-226ENST00000483148 SPRR2AP35326 72 aa3.98□□□□□ -1.77
APTX-226ENST00000483148 SPRR2FQ96RM1 72 aa3.94□□□□□ -1.78
APTX-226ENST00000483148 MT1XP80297 61 aa3.91□□□□□ -1.78
APTX-226ENST00000483148 LCE1AQ5T7P2 110 aa3.9□□□□□ -1.79
APTX-226ENST00000483148 KRTAP12-3P60328 96 aa3.89□□□□□ -1.79
APTX-226ENST00000483148 KRTAP10-12P60413 245 aa3.89□□□□□ -1.79
APTX-226ENST00000483148 SPRR2DP22532 72 aa3.85□□□□□ -1.79
APTX-226ENST00000483148 GPR98Q8WXG9 6306 aa3.84□□□□□ -1.79
APTX-226ENST00000483148 KRTAP10-7P60409 375 aaPredicted RBP3.74□□□□□ -1.81
APTX-226ENST00000483148 LCE3CQ5T5A8 94 aa3.7□□□□□ -1.82
APTX-226ENST00000483148 DSTQ03001 7570 aaKnown RBP3.57□□□□□ -1.84
APTX-226ENST00000483148 KRTAP19-5Q3LI72 72 aa3.56□□□□□ -1.84
APTX-226ENST00000483148 KRTAP19-7Q3SYF9 63 aa3.51□□□□□ -1.85
APTX-226ENST00000483148 KRTAP9-6A8MVA2 160 aa3.5□□□□□ -1.85
APTX-226ENST00000483148 MT3P25713 68 aa3.46□□□□□ -1.86
APTX-226ENST00000483148 MT1EP04732 61 aa3.45□□□□□ -1.86
APTX-226ENST00000483148 KRTAP5-10Q6L8G5 202 aa3.44□□□□□ -1.86
APTX-226ENST00000483148 AHNAK2Q8IVF2 5795 aa3.43□□□□□ -1.86
APTX-226ENST00000483148 MT4P47944 62 aa3.42□□□□□ -1.86
APTX-226ENST00000483148 HMCN1Q96RW7 5635 aa3.41□□□□□ -1.86
APTX-226ENST00000483148 KRTAP19-3Q7Z4W3 81 aa3.37□□□□□ -1.87
APTX-226ENST00000483148 KRTAP5-7Q6L8G8 165 aa3.35□□□□□ -1.87
APTX-226ENST00000483148 MT1LQ93083 61 aa3.34□□□□□ -1.87
APTX-226ENST00000483148 MT1GP13640 62 aa3.31□□□□□ -1.88
APTX-226ENST00000483148 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.28□□□□□ -1.89
APTX-226ENST00000483148 KRTAP5-4Q6L8H1 288 aa3.27□□□□□ -1.89
APTX-226ENST00000483148 MT1MQ8N339 61 aa3.26□□□□□ -1.89
APTX-226ENST00000483148 KRTAP12-4P60329 112 aa3.25□□□□□ -1.89
APTX-226ENST00000483148 KRTAP4-3Q9BYR4 195 aa3.19□□□□□ -1.9
APTX-226ENST00000483148 LCE1FQ5T754 118 aa3.16□□□□□ -1.9
APTX-226ENST00000483148 KRTAP20-2Q3LI61 65 aa3.1□□□□□ -1.91
APTX-226ENST00000483148 MT1AP04731 61 aa3.04□□□□□ -1.92
APTX-226ENST00000483148 KRTAP5-11Q6L8G4 156 aa3□□□□□ -1.93
APTX-226ENST00000483148 KRTAP5-5Q701N2 237 aaPredicted RBP3□□□□□ -1.93
APTX-226ENST00000483148 LCE1EQ5T753 118 aa2.95□□□□□ -1.94
APTX-226ENST00000483148 LCE3EQ5T5B0 92 aa2.93□□□□□ -1.94
APTX-226ENST00000483148 AHNAKQ09666 5890 aaKnown RBP2.92□□□□□ -1.94
APTX-226ENST00000483148 SYNE1Q8NF91 8797 aaKnown RBP2.91□□□□□ -1.94
APTX-226ENST00000483148 PRM1P04553 51 aa2.91□□□□□ -1.94
APTX-226ENST00000483148 LCE3DQ9BYE3 92 aa2.9□□□□□ -1.94
APTX-226ENST00000483148 MUC5ACP98088 5654 aa2.88□□□□□ -1.95
APTX-226ENST00000483148 KRTAP5-8O75690 187 aa2.86□□□□□ -1.95
APTX-226ENST00000483148 KRTAP6-1Q3LI64 71 aa2.82□□□□□ -1.96
APTX-226ENST00000483148 MUC5BQ9HC84 5762 aaPredicted RBP2.81□□□□□ -1.96
APTX-226ENST00000483148 KRTAP5-2Q701N4 177 aa2.79□□□□□ -1.96
APTX-226ENST00000483148 KRTAP5-1Q6L8H4 278 aa2.77□□□□□ -1.97
APTX-226ENST00000483148 KRTAP6-2Q3LI66 62 aa2.71□□□□□ -1.98
APTX-226ENST00000483148 KRTAP4-4Q9BYR3 166 aa2.7□□□□□ -1.98
APTX-226ENST00000483148 OBSCNQ5VST9 7968 aa2.61□□□□□ -1.99
APTX-226ENST00000483148 LCE1BQ5T7P3 118 aa2.23□□□□□ -2.05
APTX-226ENST00000483148 LCE1CQ5T751 118 aa2.15□□□□□ -2.06
APTX-226ENST00000483148 PHGR1C9JFL3 82 aa2□□□□□ -2.09
APTX-226ENST00000483148 KRTAP21-1Q3LI58 79 aa1.93□□□□□ -2.1
APTX-226ENST00000483148 KRTAP21-2Q3LI59 83 aa1.86□□□□□ -2.11
APTX-226ENST00000483148 MUC19Q7Z5P9 8384 aa1.64□□□□□ -2.15
APTX-226ENST00000483148 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 15.7 ms