RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 KRTAP2-3P0C7H8 128 aa1.25□□□□□ -2.21
GTF3A-207ENST00000482655 LIMD2Q9BT23 127 aa1.25□□□□□ -2.21
GTF3A-207ENST00000482655 KRTAP2-4Q9BYR9 128 aa1.25□□□□□ -2.21
GTF3A-207ENST00000482655 TP53AIP1Q9HCN2 124 aa1.25□□□□□ -2.21
GTF3A-207ENST00000482655 MDN1Q9NU22 5596 aa1.25□□□□□ -2.21
GTF3A-207ENST00000482655 AHNAKQ09666 5890 aaKnown RBP1.25□□□□□ -2.21
GTF3A-207ENST00000482655 AHNAK2Q8IVF2 5795 aa1.24□□□□□ -2.21
GTF3A-207ENST00000482655 ATP11AUNQ6ZP68 121 aa1.24□□□□□ -2.21
GTF3A-207ENST00000482655 LINC00208Q96KT6 92 aa1.24□□□□□ -2.21
GTF3A-207ENST00000482655 H0Y9P7 68 aa1.23□□□□□ -2.21
GTF3A-207ENST00000482655 PRLHP81277 87 aa1.23□□□□□ -2.21
GTF3A-207ENST00000482655 CASC2Q6XLA1 102 aa1.23□□□□□ -2.21
GTF3A-207ENST00000482655 DEFB105AQ8NG35 78 aa1.23□□□□□ -2.21
GTF3A-207ENST00000482655 CDC42SE1Q9NRR8 79 aa1.23□□□□□ -2.21
GTF3A-207ENST00000482655 WFDC13Q8IUB5 93 aa1.22□□□□□ -2.21
GTF3A-207ENST00000482655 BRK1Q8WUW1 75 aa1.22□□□□□ -2.21
GTF3A-207ENST00000482655 DMAC1Q96GE9 116 aa1.22□□□□□ -2.21
GTF3A-207ENST00000482655 MRPL34Q9BQ48 92 aaKnown RBP1.22□□□□□ -2.21
GTF3A-207ENST00000482655 C9orf92A6NGG3 77 aa1.21□□□□□ -2.22
GTF3A-207ENST00000482655 SPATA8Q6RVD6 105 aa1.21□□□□□ -2.22
GTF3A-207ENST00000482655 SSBP3-AS1Q7Z2R9 100 aa1.21□□□□□ -2.22
GTF3A-207ENST00000482655 KRTAP2-1Q9BYU5 128 aa1.21□□□□□ -2.22
GTF3A-207ENST00000482655 SPINK7P58062 85 aa1.2□□□□□ -2.22
GTF3A-207ENST00000482655 ROMO1P60602 79 aa1.2□□□□□ -2.22
GTF3A-207ENST00000482655 RPL37P61927 97 aaKnown RBP1.2□□□□□ -2.22
GTF3A-207ENST00000482655 SPAG11AQ6PDA7 123 aa1.2□□□□□ -2.22
GTF3A-207ENST00000482655 COX6B2Q6YFQ2 88 aa1.2□□□□□ -2.22
GTF3A-207ENST00000482655 SPINK1P00995 79 aa1.19□□□□□ -2.22
GTF3A-207ENST00000482655 CHKB-CPT1BH3BT56 60 aa1.18□□□□□ -2.22
GTF3A-207ENST00000482655 INE1O15225 51 aa1.18□□□□□ -2.22
GTF3A-207ENST00000482655 MT1BP07438 61 aa1.18□□□□□ -2.22
GTF3A-207ENST00000482655 RPS29P62273 56 aaKnown RBP1.18□□□□□ -2.22
GTF3A-207ENST00000482655 PRR15LQ9BU68 103 aa1.18□□□□□ -2.22
GTF3A-207ENST00000482655 ACYP2P14621 99 aa1.17□□□□□ -2.22
GTF3A-207ENST00000482655 MUC5BQ9HC84 5762 aaPredicted RBP1.15□□□□□ -2.22
GTF3A-207ENST00000482655 SPRR2EP22531 72 aa1.15□□□□□ -2.23
GTF3A-207ENST00000482655 SPRR2BP35325 72 aa1.15□□□□□ -2.23
GTF3A-207ENST00000482655 SPRR2AP35326 72 aa1.15□□□□□ -2.23
GTF3A-207ENST00000482655 H0YAA0 97 aa1.13□□□□□ -2.23
GTF3A-207ENST00000482655 UQCR11O14957 56 aa1.13□□□□□ -2.23
GTF3A-207ENST00000482655 KRTAP5-10Q6L8G5 202 aa1.13□□□□□ -2.23
GTF3A-207ENST00000482655 MIR22HGQ0VDD5 57 aa1.12□□□□□ -2.23
GTF3A-207ENST00000482655 SPRR2FQ96RM1 72 aa1.12□□□□□ -2.23
GTF3A-207ENST00000482655 A0A1B0GU69 56 aa1.11□□□□□ -2.23
GTF3A-207ENST00000482655 SPRR2DP22532 72 aa1.11□□□□□ -2.23
GTF3A-207ENST00000482655 SPTSSBQ8NFR3 76 aa1.11□□□□□ -2.23
GTF3A-207ENST00000482655 KRTAP19-8Q3LI54 63 aa1.1□□□□□ -2.23
GTF3A-207ENST00000482655 DSTQ03001 7570 aaKnown RBP1.08□□□□□ -2.24
GTF3A-207ENST00000482655 H1FX-AS1Q4G0G2 97 aa1.08□□□□□ -2.24
GTF3A-207ENST00000482655 CSAG1Q6PB30 78 aa1.08□□□□□ -2.24
GTF3A-207ENST00000482655 SPRR2GQ9BYE4 73 aa1.05□□□□□ -2.24
GTF3A-207ENST00000482655 MT1XP80297 61 aa1.04□□□□□ -2.24
GTF3A-207ENST00000482655 KRTAP8-1Q8IUC2 63 aa1.03□□□□□ -2.24
GTF3A-207ENST00000482655 MUC5ACP98088 5654 aa1.02□□□□□ -2.25
GTF3A-207ENST00000482655 MT4P47944 62 aa1.01□□□□□ -2.25
GTF3A-207ENST00000482655 M0QZ58 72 aa1□□□□□ -2.25
GTF3A-207ENST00000482655 S4R3F8 94 aa1□□□□□ -2.25
GTF3A-207ENST00000482655 C10orf95Q9H7T3 257 aa0.98□□□□□ -2.25
GTF3A-207ENST00000482655 CRIPTQ9P021 101 aa0.96□□□□□ -2.26
GTF3A-207ENST00000482655 KRTAP19-7Q3SYF9 63 aa0.95□□□□□ -2.26
GTF3A-207ENST00000482655 A0A0D9SG42 100 aa0.93□□□□□ -2.26
GTF3A-207ENST00000482655 MT1EP04732 61 aa0.92□□□□□ -2.26
GTF3A-207ENST00000482655 KRTAP20-2Q3LI61 65 aa0.92□□□□□ -2.26
GTF3A-207ENST00000482655 KRTAP19-3Q7Z4W3 81 aa0.92□□□□□ -2.26
GTF3A-207ENST00000482655 PLAC4Q8WY50 150 aa0.92□□□□□ -2.26
GTF3A-207ENST00000482655 MT1MQ8N339 61 aa0.89□□□□□ -2.27
GTF3A-207ENST00000482655 SYNE1Q8NF91 8797 aaKnown RBP0.86□□□□□ -2.27
GTF3A-207ENST00000482655 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
GTF3A-207ENST00000482655 TNP1P09430 55 aa0.85□□□□□ -2.27
GTF3A-207ENST00000482655 MT1GP13640 62 aa0.85□□□□□ -2.27
GTF3A-207ENST00000482655 MT1LQ93083 61 aa0.84□□□□□ -2.27
GTF3A-207ENST00000482655 KRTAP19-5Q3LI72 72 aa0.83□□□□□ -2.28
GTF3A-207ENST00000482655 KRTAP6-1Q3LI64 71 aa0.74□□□□□ -2.29
GTF3A-207ENST00000482655 KRTAP6-2Q3LI66 62 aa0.72□□□□□ -2.29
GTF3A-207ENST00000482655 MT1AP04731 61 aa0.69□□□□□ -2.3
GTF3A-207ENST00000482655 PHGR1C9JFL3 82 aa0.62□□□□□ -2.31
GTF3A-207ENST00000482655 PRM1P04553 51 aa0.54□□□□□ -2.32
GTF3A-207ENST00000482655 KRTAP21-1Q3LI58 79 aa0.49□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 229.7 ms