RNA–Protein interactions for RNA: ENST00000482098.1

LINC00888-203, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 794 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-203ENST00000482098 CHKB-CPT1BH3BT56 60 aa3.32□□□□□ -1.88
LINC00888-203ENST00000482098 CSAG1Q6PB30 78 aa3.32□□□□□ -1.88
LINC00888-203ENST00000482098 COA5Q86WW8 74 aa3.32□□□□□ -1.88
LINC00888-203ENST00000482098 KRTAP2-1Q9BYU5 128 aa3.29□□□□□ -1.88
LINC00888-203ENST00000482098 SPTSSBQ8NFR3 76 aa3.28□□□□□ -1.88
LINC00888-203ENST00000482098 KRTAP9-6A8MVA2 160 aa3.26□□□□□ -1.89
LINC00888-203ENST00000482098 H0YAA0 97 aa3.25□□□□□ -1.89
LINC00888-203ENST00000482098 LCE3DQ9BYE3 92 aa3.21□□□□□ -1.9
LINC00888-203ENST00000482098 MIR22HGQ0VDD5 57 aa3.2□□□□□ -1.9
LINC00888-203ENST00000482098 SPRR2EP22531 72 aa3.18□□□□□ -1.9
LINC00888-203ENST00000482098 SPRR2BP35325 72 aa3.18□□□□□ -1.9
LINC00888-203ENST00000482098 SPRR2AP35326 72 aa3.18□□□□□ -1.9
LINC00888-203ENST00000482098 MT1BP07438 61 aa3.17□□□□□ -1.9
LINC00888-203ENST00000482098 Q5VV11 94 aa3.16□□□□□ -1.9
LINC00888-203ENST00000482098 CRIPTQ9P021 101 aa3.15□□□□□ -1.91
LINC00888-203ENST00000482098 KRTAP19-8Q3LI54 63 aa3.14□□□□□ -1.91
LINC00888-203ENST00000482098 SPRR2FQ96RM1 72 aa3.14□□□□□ -1.91
LINC00888-203ENST00000482098 CDC42SE1Q9NRR8 79 aa3.14□□□□□ -1.91
LINC00888-203ENST00000482098 DSTQ03001 7570 aaKnown RBP3.14□□□□□ -1.91
LINC00888-203ENST00000482098 A0A1B0GU69 56 aa3.13□□□□□ -1.91
LINC00888-203ENST00000482098 KRTAP13-4Q3LI77 160 aa3.13□□□□□ -1.91
LINC00888-203ENST00000482098 SPRR2GQ9BYE4 73 aa3.13□□□□□ -1.91
LINC00888-203ENST00000482098 LINC01558Q9Y6Z2 57 aa3.13□□□□□ -1.91
LINC00888-203ENST00000482098 M0QZ58 72 aa3.12□□□□□ -1.91
LINC00888-203ENST00000482098 PRR15LQ9BU68 103 aa3.1□□□□□ -1.91
LINC00888-203ENST00000482098 SPRR2DP22532 72 aa3.09□□□□□ -1.91
LINC00888-203ENST00000482098 INE1O15225 51 aa3.04□□□□□ -1.92
LINC00888-203ENST00000482098 SPATA8Q6RVD6 105 aa3.04□□□□□ -1.92
LINC00888-203ENST00000482098 KRTAP5-11Q6L8G4 156 aa3.02□□□□□ -1.93
LINC00888-203ENST00000482098 KRTAP8-1Q8IUC2 63 aa3.02□□□□□ -1.93
LINC00888-203ENST00000482098 A0A0D9SG42 100 aa3□□□□□ -1.93
LINC00888-203ENST00000482098 UQCR11O14957 56 aa3□□□□□ -1.93
LINC00888-203ENST00000482098 PP632Q6XCG6 107 aa3□□□□□ -1.93
LINC00888-203ENST00000482098 KRTAP12-1P59990 96 aa2.98□□□□□ -1.93
LINC00888-203ENST00000482098 PLAC4Q8WY50 150 aa2.98□□□□□ -1.93
LINC00888-203ENST00000482098 HMCN1Q96RW7 5635 aa2.93□□□□□ -1.94
LINC00888-203ENST00000482098 AHNAK2Q8IVF2 5795 aa2.92□□□□□ -1.94
LINC00888-203ENST00000482098 MT1XP80297 61 aa2.92□□□□□ -1.94
LINC00888-203ENST00000482098 LCE3AQ5TA76 89 aa2.84□□□□□ -1.95
LINC00888-203ENST00000482098 KRTAP5-10Q6L8G5 202 aa2.83□□□□□ -1.96
LINC00888-203ENST00000482098 KRTAP5-7Q6L8G8 165 aa2.79□□□□□ -1.96
LINC00888-203ENST00000482098 C10orf95Q9H7T3 257 aa2.79□□□□□ -1.96
LINC00888-203ENST00000482098 KRTAP12-3P60328 96 aa2.77□□□□□ -1.97
LINC00888-203ENST00000482098 TNP1P09430 55 aa2.73□□□□□ -1.97
LINC00888-203ENST00000482098 MT4P47944 62 aa2.7□□□□□ -1.98
LINC00888-203ENST00000482098 KRTAP19-3Q7Z4W3 81 aa2.66□□□□□ -1.98
LINC00888-203ENST00000482098 KRTAP5-4Q6L8H1 288 aa2.64□□□□□ -1.99
LINC00888-203ENST00000482098 KRTAP19-5Q3LI72 72 aa2.6□□□□□ -1.99
LINC00888-203ENST00000482098 KRTAP19-7Q3SYF9 63 aa2.6□□□□□ -1.99
LINC00888-203ENST00000482098 AHNAKQ09666 5890 aaKnown RBP2.59□□□□□ -1.99
LINC00888-203ENST00000482098 MT1EP04732 61 aa2.59□□□□□ -1.99
LINC00888-203ENST00000482098 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.59□□□□□ -1.99
LINC00888-203ENST00000482098 MT1GP13640 62 aa2.58□□□□□ -2
LINC00888-203ENST00000482098 KRTAP12-4P60329 112 aa2.57□□□□□ -2
LINC00888-203ENST00000482098 KRTAP5-5Q701N2 237 aaPredicted RBP2.56□□□□□ -2
LINC00888-203ENST00000482098 MUC5ACP98088 5654 aa2.51□□□□□ -2.01
LINC00888-203ENST00000482098 MT1LQ93083 61 aa2.5□□□□□ -2.01
LINC00888-203ENST00000482098 MUC5BQ9HC84 5762 aaPredicted RBP2.49□□□□□ -2.01
LINC00888-203ENST00000482098 KRTAP5-1Q6L8H4 278 aa2.49□□□□□ -2.01
LINC00888-203ENST00000482098 KRTAP20-2Q3LI61 65 aa2.48□□□□□ -2.01
LINC00888-203ENST00000482098 MT1MQ8N339 61 aa2.48□□□□□ -2.01
LINC00888-203ENST00000482098 SYNE1Q8NF91 8797 aaKnown RBP2.38□□□□□ -2.03
LINC00888-203ENST00000482098 LCE1CQ5T751 118 aa2.38□□□□□ -2.03
LINC00888-203ENST00000482098 LCE1BQ5T7P3 118 aa2.38□□□□□ -2.03
LINC00888-203ENST00000482098 KRTAP4-3Q9BYR4 195 aa2.38□□□□□ -2.03
LINC00888-203ENST00000482098 OBSCNQ5VST9 7968 aa2.31□□□□□ -2.04
LINC00888-203ENST00000482098 KRTAP5-8O75690 187 aa2.3□□□□□ -2.04
LINC00888-203ENST00000482098 KRTAP5-2Q701N4 177 aa2.24□□□□□ -2.05
LINC00888-203ENST00000482098 KRTAP4-4Q9BYR3 166 aa2.14□□□□□ -2.07
LINC00888-203ENST00000482098 MT1AP04731 61 aa2.13□□□□□ -2.07
LINC00888-203ENST00000482098 KRTAP6-1Q3LI64 71 aa2.1□□□□□ -2.07
LINC00888-203ENST00000482098 KRTAP6-2Q3LI66 62 aa2.02□□□□□ -2.09
LINC00888-203ENST00000482098 MUC19Q7Z5P9 8384 aa1.78□□□□□ -2.12
LINC00888-203ENST00000482098 PHGR1C9JFL3 82 aa1.65□□□□□ -2.15
LINC00888-203ENST00000482098 KRTAP21-2Q3LI59 83 aa1.61□□□□□ -2.15
LINC00888-203ENST00000482098 PRM1P04553 51 aa1.41□□□□□ -2.18
LINC00888-203ENST00000482098 KRTAP21-1Q3LI58 79 aa1.3□□□□□ -2.2
LINC00888-203ENST00000482098 MUC16Q8WXI7 14507 aa1□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 296.2 ms