RNA–Protein interactions for RNA: ENST00000482028.5

PABPC4-213, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 633 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-213ENST00000482028 MT1BP07438 61 aa5.38□□□□□ -1.55
PABPC4-213ENST00000482028 KRTAP6-3Q3LI67 103 aa5.36□□□□□ -1.55
PABPC4-213ENST00000482028 KRTAP20-1Q3LI63 56 aa5.35□□□□□ -1.55
PABPC4-213ENST00000482028 MT1XP80297 61 aa5.28□□□□□ -1.56
PABPC4-213ENST00000482028 KRTAP10-5P60370 271 aa5.27□□□□□ -1.57
PABPC4-213ENST00000482028 MUC12Q9UKN1 5478 aa5.23□□□□□ -1.57
PABPC4-213ENST00000482028 KRTAP15-1Q3LI76 137 aa5.2□□□□□ -1.58
PABPC4-213ENST00000482028 KRTAP8-1Q8IUC2 63 aa5.18□□□□□ -1.58
PABPC4-213ENST00000482028 KRTAP10-12P60413 245 aa5.17□□□□□ -1.58
PABPC4-213ENST00000482028 GPR98Q8WXG9 6306 aa5.16□□□□□ -1.58
PABPC4-213ENST00000482028 LCE3AQ5TA76 89 aa5.12□□□□□ -1.59
PABPC4-213ENST00000482028 KRTAP19-6Q3LI70 58 aa5.07□□□□□ -1.6
PABPC4-213ENST00000482028 KMT2DO14686 5537 aa5.07□□□□□ -1.6
PABPC4-213ENST00000482028 NDUFAF8A1L188 74 aa5.06□□□□□ -1.6
PABPC4-213ENST00000482028 LUZP6Q538Z0 58 aa5.05□□□□□ -1.6
PABPC4-213ENST00000482028 KRTAP12-3P60328 96 aa5.01□□□□□ -1.61
PABPC4-213ENST00000482028 KRTAP10-7P60409 375 aaPredicted RBP5.01□□□□□ -1.61
PABPC4-213ENST00000482028 SPRR5A0A1B0GTR4 108 aa4.98□□□□□ -1.61
PABPC4-213ENST00000482028 KRTAP2-3P0C7H8 128 aa4.98□□□□□ -1.61
PABPC4-213ENST00000482028 KRTAP2-4Q9BYR9 128 aa4.98□□□□□ -1.61
PABPC4-213ENST00000482028 MDN1Q9NU22 5596 aa4.97□□□□□ -1.61
PABPC4-213ENST00000482028 KRTAP5-9P26371 169 aa4.8□□□□□ -1.64
PABPC4-213ENST00000482028 KRTAP19-5Q3LI72 72 aa4.8□□□□□ -1.64
PABPC4-213ENST00000482028 KRTAP2-2Q9BYT5 123 aa4.77□□□□□ -1.65
PABPC4-213ENST00000482028 KRTAP2-1Q9BYU5 128 aa4.77□□□□□ -1.65
PABPC4-213ENST00000482028 LCE3CQ5T5A8 94 aa4.7□□□□□ -1.66
PABPC4-213ENST00000482028 KRTAP19-7Q3SYF9 63 aa4.69□□□□□ -1.66
PABPC4-213ENST00000482028 MT1EP04732 61 aa4.64□□□□□ -1.67
PABPC4-213ENST00000482028 MT1LQ93083 61 aa4.58□□□□□ -1.68
PABPC4-213ENST00000482028 SPRR2EP22531 72 aa4.54□□□□□ -1.68
PABPC4-213ENST00000482028 SPRR2BP35325 72 aa4.54□□□□□ -1.68
PABPC4-213ENST00000482028 SPRR2AP35326 72 aa4.54□□□□□ -1.68
PABPC4-213ENST00000482028 MT1GP13640 62 aa4.51□□□□□ -1.69
PABPC4-213ENST00000482028 KRTAP19-3Q7Z4W3 81 aa4.46□□□□□ -1.7
PABPC4-213ENST00000482028 DSTQ03001 7570 aaKnown RBP4.42□□□□□ -1.7
PABPC4-213ENST00000482028 SPRR2FQ96RM1 72 aa4.41□□□□□ -1.7
PABPC4-213ENST00000482028 SPRR2DP22532 72 aa4.4□□□□□ -1.71
PABPC4-213ENST00000482028 LCE1AQ5T7P2 110 aa4.4□□□□□ -1.71
PABPC4-213ENST00000482028 AHNAK2Q8IVF2 5795 aa4.38□□□□□ -1.71
PABPC4-213ENST00000482028 MT3P25713 68 aa4.37□□□□□ -1.71
PABPC4-213ENST00000482028 MT1MQ8N339 61 aa4.35□□□□□ -1.71
PABPC4-213ENST00000482028 KRTAP9-6A8MVA2 160 aa4.27□□□□□ -1.73
PABPC4-213ENST00000482028 INE1O15225 51 aa4.27□□□□□ -1.73
PABPC4-213ENST00000482028 KRTAP5-10Q6L8G5 202 aa4.27□□□□□ -1.73
PABPC4-213ENST00000482028 HMCN1Q96RW7 5635 aa4.25□□□□□ -1.73
PABPC4-213ENST00000482028 KRTAP5-7Q6L8G8 165 aa4.21□□□□□ -1.74
PABPC4-213ENST00000482028 KRTAP4-3Q9BYR4 195 aa4.07□□□□□ -1.76
PABPC4-213ENST00000482028 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.03□□□□□ -1.76
PABPC4-213ENST00000482028 MT1AP04731 61 aa3.95□□□□□ -1.78
PABPC4-213ENST00000482028 KRTAP5-5Q701N2 237 aaPredicted RBP3.92□□□□□ -1.78
PABPC4-213ENST00000482028 MT4P47944 62 aa3.91□□□□□ -1.78
PABPC4-213ENST00000482028 AHNAKQ09666 5890 aaKnown RBP3.9□□□□□ -1.78
PABPC4-213ENST00000482028 KRTAP5-11Q6L8G4 156 aa3.89□□□□□ -1.79
PABPC4-213ENST00000482028 KRTAP6-1Q3LI64 71 aa3.78□□□□□ -1.8
PABPC4-213ENST00000482028 LCE1FQ5T754 118 aa3.78□□□□□ -1.8
PABPC4-213ENST00000482028 MUC5ACP98088 5654 aa3.74□□□□□ -1.81
PABPC4-213ENST00000482028 MUC5BQ9HC84 5762 aaPredicted RBP3.74□□□□□ -1.81
PABPC4-213ENST00000482028 KRTAP12-4P60329 112 aa3.7□□□□□ -1.82
PABPC4-213ENST00000482028 KRTAP5-4Q6L8H1 288 aa3.68□□□□□ -1.82
PABPC4-213ENST00000482028 LCE1EQ5T753 118 aa3.61□□□□□ -1.83
PABPC4-213ENST00000482028 LCE3DQ9BYE3 92 aa3.59□□□□□ -1.83
PABPC4-213ENST00000482028 LCE3EQ5T5B0 92 aa3.53□□□□□ -1.84
PABPC4-213ENST00000482028 KRTAP20-2Q3LI61 65 aa3.49□□□□□ -1.85
PABPC4-213ENST00000482028 KRTAP5-1Q6L8H4 278 aa3.49□□□□□ -1.85
PABPC4-213ENST00000482028 SYNE1Q8NF91 8797 aaKnown RBP3.48□□□□□ -1.85
PABPC4-213ENST00000482028 KRTAP6-2Q3LI66 62 aa3.46□□□□□ -1.86
PABPC4-213ENST00000482028 KRTAP5-8O75690 187 aa3.39□□□□□ -1.87
PABPC4-213ENST00000482028 KRTAP5-2Q701N4 177 aa3.38□□□□□ -1.87
PABPC4-213ENST00000482028 KRTAP4-4Q9BYR3 166 aa3.37□□□□□ -1.87
PABPC4-213ENST00000482028 OBSCNQ5VST9 7968 aa3.09□□□□□ -1.92
PABPC4-213ENST00000482028 PRM1P04553 51 aa3.07□□□□□ -1.92
PABPC4-213ENST00000482028 LCE1CQ5T751 118 aa2.9□□□□□ -1.95
PABPC4-213ENST00000482028 LCE1BQ5T7P3 118 aa2.9□□□□□ -1.95
PABPC4-213ENST00000482028 KRTAP21-2Q3LI59 83 aa2.5□□□□□ -2.01
PABPC4-213ENST00000482028 PHGR1C9JFL3 82 aa2.49□□□□□ -2.01
PABPC4-213ENST00000482028 MUC19Q7Z5P9 8384 aa1.99□□□□□ -2.09
PABPC4-213ENST00000482028 KRTAP21-1Q3LI58 79 aa1.98□□□□□ -2.09
PABPC4-213ENST00000482028 MUC16Q8WXI7 14507 aa1.34□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 88.1 ms