RNA–Protein interactions for RNA: ENST00000480952.1

NDC1-202, Transcript of NDC1 transmembrane nucleoporin, humanhuman

TSL 3

Gene NDC1, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-202ENST00000480952 PP632Q6XCG6 107 aa4.87□□□□□ -1.63
NDC1-202ENST00000480952 ATP5EP56381 51 aaPredicted RBP4.85□□□□□ -1.63
NDC1-202ENST00000480952 CAMK2N1Q7Z7J9 78 aa4.84□□□□□ -1.63
NDC1-202ENST00000480952 KRTAP5-4Q6L8H1 288 aa4.82□□□□□ -1.64
NDC1-202ENST00000480952 KRTAP5-3Q6L8H2 238 aa4.8□□□□□ -1.64
NDC1-202ENST00000480952 MT1MQ8N339 61 aa4.79□□□□□ -1.64
NDC1-202ENST00000480952 A0A1B0GU69 56 aa4.78□□□□□ -1.64
NDC1-202ENST00000480952 TMEM258P61165 79 aa4.78□□□□□ -1.64
NDC1-202ENST00000480952 KRTAP19-5Q3LI72 72 aa4.78□□□□□ -1.64
NDC1-202ENST00000480952 KRTAP13-4Q3LI77 160 aa4.78□□□□□ -1.64
NDC1-202ENST00000480952 SPRR5A0A1B0GTR4 108 aa4.76□□□□□ -1.65
NDC1-202ENST00000480952 A0A1B0GU33 70 aa4.76□□□□□ -1.65
NDC1-202ENST00000480952 A0A0D9SG42 100 aa4.73□□□□□ -1.65
NDC1-202ENST00000480952 SPATA8Q6RVD6 105 aa4.73□□□□□ -1.65
NDC1-202ENST00000480952 KRTAP4-3Q9BYR4 195 aa4.71□□□□□ -1.66
NDC1-202ENST00000480952 PRR15LQ9BU68 103 aa4.7□□□□□ -1.66
NDC1-202ENST00000480952 MT1LQ93083 61 aa4.69□□□□□ -1.66
NDC1-202ENST00000480952 SPINT4Q6UDR6 99 aa4.66□□□□□ -1.66
NDC1-202ENST00000480952 SMIM26A0A096LP01 95 aa4.64□□□□□ -1.67
NDC1-202ENST00000480952 LINC01558Q9Y6Z2 57 aa4.64□□□□□ -1.67
NDC1-202ENST00000480952 A0A0A0MQY5 61 aa4.62□□□□□ -1.67
NDC1-202ENST00000480952 KRTAP20-2Q3LI61 65 aa4.6□□□□□ -1.67
NDC1-202ENST00000480952 KRTAP12-1P59990 96 aa4.58□□□□□ -1.68
NDC1-202ENST00000480952 A8MU10 97 aa4.57□□□□□ -1.68
NDC1-202ENST00000480952 UQCR11O14957 56 aa4.53□□□□□ -1.68
NDC1-202ENST00000480952 V9GYY9 64 aa4.51□□□□□ -1.69
NDC1-202ENST00000480952 C10orf95Q9H7T3 257 aa4.48□□□□□ -1.69
NDC1-202ENST00000480952 KRTAP12-4P60329 112 aa4.47□□□□□ -1.69
NDC1-202ENST00000480952 PSPHP1O15172 72 aa4.46□□□□□ -1.7
NDC1-202ENST00000480952 Q1T7F1 81 aa4.46□□□□□ -1.7
NDC1-202ENST00000480952 MIR22HGQ0VDD5 57 aa4.44□□□□□ -1.7
NDC1-202ENST00000480952 LCE3AQ5TA76 89 aa4.43□□□□□ -1.7
NDC1-202ENST00000480952 KRTAP5-5Q701N2 237 aaPredicted RBP4.42□□□□□ -1.7
NDC1-202ENST00000480952 AHNAKQ09666 5890 aaKnown RBP4.41□□□□□ -1.7
NDC1-202ENST00000480952 SYNE1Q8NF91 8797 aaKnown RBP4.39□□□□□ -1.71
NDC1-202ENST00000480952 K7ERS5 55 aa4.37□□□□□ -1.71
NDC1-202ENST00000480952 RPS28P62857 69 aaKnown RBP4.37□□□□□ -1.71
NDC1-202ENST00000480952 TNP1P09430 55 aa4.36□□□□□ -1.71
NDC1-202ENST00000480952 A6NED7 52 aa4.34□□□□□ -1.71
NDC1-202ENST00000480952 MUC5ACP98088 5654 aa4.32□□□□□ -1.72
NDC1-202ENST00000480952 MUC5BQ9HC84 5762 aaPredicted RBP4.28□□□□□ -1.72
NDC1-202ENST00000480952 KRTAP12-3P60328 96 aa4.27□□□□□ -1.73
NDC1-202ENST00000480952 KRTAP5-8O75690 187 aa4.2□□□□□ -1.74
NDC1-202ENST00000480952 KRTAP25-1Q3LHN0 102 aa4.18□□□□□ -1.74
NDC1-202ENST00000480952 KRTAP5-2Q701N4 177 aa4.13□□□□□ -1.75
NDC1-202ENST00000480952 CDC42SE1Q9NRR8 79 aa4.13□□□□□ -1.75
NDC1-202ENST00000480952 OBSCNQ5VST9 7968 aa4.1□□□□□ -1.75
NDC1-202ENST00000480952 ROMO1P60602 79 aa4.06□□□□□ -1.76
NDC1-202ENST00000480952 MT3P25713 68 aa4.04□□□□□ -1.76
NDC1-202ENST00000480952 KRTAP6-1Q3LI64 71 aa3.99□□□□□ -1.77
NDC1-202ENST00000480952 MT1AP04731 61 aa3.98□□□□□ -1.77
NDC1-202ENST00000480952 KRTAP6-2Q3LI66 62 aa3.92□□□□□ -1.78
NDC1-202ENST00000480952 BRK1Q8WUW1 75 aa3.92□□□□□ -1.78
NDC1-202ENST00000480952 LCE3CQ5T5A8 94 aa3.88□□□□□ -1.79
NDC1-202ENST00000480952 PRAC1Q96KF2 57 aa3.85□□□□□ -1.79
NDC1-202ENST00000480952 KRTAP5-1Q6L8H4 278 aa3.81□□□□□ -1.8
NDC1-202ENST00000480952 NDUFAF8A1L188 74 aa3.78□□□□□ -1.8
NDC1-202ENST00000480952 PMAIP1Q13794 54 aa3.7□□□□□ -1.82
NDC1-202ENST00000480952 KRTAP9-6A8MVA2 160 aa3.65□□□□□ -1.83
NDC1-202ENST00000480952 LCE1FQ5T754 118 aa3.65□□□□□ -1.83
NDC1-202ENST00000480952 LCE1EQ5T753 118 aa3.58□□□□□ -1.84
NDC1-202ENST00000480952 PRO0628Q9UI54 55 aa3.54□□□□□ -1.84
NDC1-202ENST00000480952 KRTAP5-11Q6L8G4 156 aa3.48□□□□□ -1.85
NDC1-202ENST00000480952 LCE1BQ5T7P3 118 aa3.36□□□□□ -1.87
NDC1-202ENST00000480952 KTN1-AS1Q86SY8 53 aa3.36□□□□□ -1.87
NDC1-202ENST00000480952 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.34□□□□□ -1.87
NDC1-202ENST00000480952 LCE1CQ5T751 118 aa3.23□□□□□ -1.89
NDC1-202ENST00000480952 LCE3EQ5T5B0 92 aa3.05□□□□□ -1.92
NDC1-202ENST00000480952 LUZP6Q538Z0 58 aa2.98□□□□□ -1.93
NDC1-202ENST00000480952 PHGR1C9JFL3 82 aa2.97□□□□□ -1.93
NDC1-202ENST00000480952 LCE3DQ9BYE3 92 aa2.77□□□□□ -1.97
NDC1-202ENST00000480952 KRTAP4-4Q9BYR3 166 aa2.74□□□□□ -1.97
NDC1-202ENST00000480952 KRTAP21-2Q3LI59 83 aa2.63□□□□□ -1.99
NDC1-202ENST00000480952 MUC19Q7Z5P9 8384 aa2.56□□□□□ -2
NDC1-202ENST00000480952 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
NDC1-202ENST00000480952 PRM1P04553 51 aa2.09□□□□□ -2.07
NDC1-202ENST00000480952 INE1O15225 51 aa2.05□□□□□ -2.08
NDC1-202ENST00000480952 MUC16Q8WXI7 14507 aa1.76□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 85.9 ms