RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 KRTAP10-7P60409 375 aaPredicted RBP4.92□□□□□ -1.62
TRA2B-212ENST00000480461 UQCR11O14957 56 aa4.91□□□□□ -1.62
TRA2B-212ENST00000480461 LCE1AQ5T7P2 110 aa4.91□□□□□ -1.62
TRA2B-212ENST00000480461 CAMK2N1Q7Z7J9 78 aa4.91□□□□□ -1.62
TRA2B-212ENST00000480461 SPRR2DP22532 72 aa4.87□□□□□ -1.63
TRA2B-212ENST00000480461 KRTAP10-12P60413 245 aa4.87□□□□□ -1.63
TRA2B-212ENST00000480461 MIR22HGQ0VDD5 57 aa4.84□□□□□ -1.63
TRA2B-212ENST00000480461 KRTAP8-1Q8IUC2 63 aa4.82□□□□□ -1.64
TRA2B-212ENST00000480461 C10orf95Q9H7T3 257 aa4.79□□□□□ -1.64
TRA2B-212ENST00000480461 A6NED7 52 aa4.74□□□□□ -1.65
TRA2B-212ENST00000480461 DSTQ03001 7570 aaKnown RBP4.69□□□□□ -1.66
TRA2B-212ENST00000480461 TNP1P09430 55 aa4.61□□□□□ -1.67
TRA2B-212ENST00000480461 CDC42SE1Q9NRR8 79 aa4.61□□□□□ -1.67
TRA2B-212ENST00000480461 K7ERS5 55 aa4.6□□□□□ -1.67
TRA2B-212ENST00000480461 KRTAP19-7Q3SYF9 63 aa4.6□□□□□ -1.67
TRA2B-212ENST00000480461 LCE3AQ5TA76 89 aa4.57□□□□□ -1.68
TRA2B-212ENST00000480461 KRTAP19-5Q3LI72 72 aa4.54□□□□□ -1.68
TRA2B-212ENST00000480461 MT1EP04732 61 aa4.52□□□□□ -1.69
TRA2B-212ENST00000480461 KRTAP25-1Q3LHN0 102 aa4.5□□□□□ -1.69
TRA2B-212ENST00000480461 HMCN1Q96RW7 5635 aa4.46□□□□□ -1.7
TRA2B-212ENST00000480461 ROMO1P60602 79 aa4.44□□□□□ -1.7
TRA2B-212ENST00000480461 KRTAP19-3Q7Z4W3 81 aa4.4□□□□□ -1.71
TRA2B-212ENST00000480461 AHNAK2Q8IVF2 5795 aa4.39□□□□□ -1.71
TRA2B-212ENST00000480461 BRK1Q8WUW1 75 aa4.39□□□□□ -1.71
TRA2B-212ENST00000480461 KRTAP12-3P60328 96 aa4.37□□□□□ -1.71
TRA2B-212ENST00000480461 KRTAP5-10Q6L8G5 202 aa4.37□□□□□ -1.71
TRA2B-212ENST00000480461 MT1LQ93083 61 aa4.37□□□□□ -1.71
TRA2B-212ENST00000480461 KRTAP23-1A1A580 65 aa4.35□□□□□ -1.71
TRA2B-212ENST00000480461 MT1GP13640 62 aa4.33□□□□□ -1.72
TRA2B-212ENST00000480461 MT4P47944 62 aa4.31□□□□□ -1.72
TRA2B-212ENST00000480461 MT1MQ8N339 61 aa4.28□□□□□ -1.72
TRA2B-212ENST00000480461 KRTAP5-7Q6L8G8 165 aa4.25□□□□□ -1.73
TRA2B-212ENST00000480461 KRTAP4-3Q9BYR4 195 aa4.24□□□□□ -1.73
TRA2B-212ENST00000480461 PP632Q6XCG6 107 aa4.21□□□□□ -1.74
TRA2B-212ENST00000480461 KRTAP15-1Q3LI76 137 aa4.18□□□□□ -1.74
TRA2B-212ENST00000480461 PMAIP1Q13794 54 aa4.16□□□□□ -1.74
TRA2B-212ENST00000480461 KRTAP5-4Q6L8H1 288 aa4.13□□□□□ -1.75
TRA2B-212ENST00000480461 SPRR5A0A1B0GTR4 108 aa4.09□□□□□ -1.75
TRA2B-212ENST00000480461 PRO0628Q9UI54 55 aa4.08□□□□□ -1.76
TRA2B-212ENST00000480461 LCE3CQ5T5A8 94 aa4.07□□□□□ -1.76
TRA2B-212ENST00000480461 PRAC1Q96KF2 57 aa3.99□□□□□ -1.77
TRA2B-212ENST00000480461 KRTAP20-2Q3LI61 65 aa3.93□□□□□ -1.78
TRA2B-212ENST00000480461 KRTAP5-5Q701N2 237 aaPredicted RBP3.92□□□□□ -1.78
TRA2B-212ENST00000480461 KRTAP9-6A8MVA2 160 aa3.91□□□□□ -1.78
TRA2B-212ENST00000480461 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.9□□□□□ -1.79
TRA2B-212ENST00000480461 KTN1-AS1Q86SY8 53 aa3.82□□□□□ -1.8
TRA2B-212ENST00000480461 KRTAP5-11Q6L8G4 156 aa3.77□□□□□ -1.81
TRA2B-212ENST00000480461 AHNAKQ09666 5890 aaKnown RBP3.76□□□□□ -1.81
TRA2B-212ENST00000480461 MUC5ACP98088 5654 aa3.74□□□□□ -1.81
TRA2B-212ENST00000480461 KRTAP12-4P60329 112 aa3.73□□□□□ -1.81
TRA2B-212ENST00000480461 MUC5BQ9HC84 5762 aaPredicted RBP3.7□□□□□ -1.82
TRA2B-212ENST00000480461 MT1AP04731 61 aa3.7□□□□□ -1.82
TRA2B-212ENST00000480461 KRTAP6-1Q3LI64 71 aa3.7□□□□□ -1.82
TRA2B-212ENST00000480461 SYNE1Q8NF91 8797 aaKnown RBP3.69□□□□□ -1.82
TRA2B-212ENST00000480461 KRTAP5-8O75690 187 aa3.61□□□□□ -1.83
TRA2B-212ENST00000480461 LCE1EQ5T753 118 aa3.58□□□□□ -1.84
TRA2B-212ENST00000480461 SVIPQ8NHG7 77 aa3.58□□□□□ -1.84
TRA2B-212ENST00000480461 KRTAP5-2Q701N4 177 aa3.53□□□□□ -1.84
TRA2B-212ENST00000480461 KRTAP6-2Q3LI66 62 aa3.47□□□□□ -1.85
TRA2B-212ENST00000480461 OBSCNQ5VST9 7968 aa3.47□□□□□ -1.85
TRA2B-212ENST00000480461 KRTAP5-1Q6L8H4 278 aa3.39□□□□□ -1.87
TRA2B-212ENST00000480461 MT3P25713 68 aa3.36□□□□□ -1.87
TRA2B-212ENST00000480461 KRTAP4-4Q9BYR3 166 aa3.25□□□□□ -1.89
TRA2B-212ENST00000480461 LUZP6Q538Z0 58 aa3.19□□□□□ -1.9
TRA2B-212ENST00000480461 LCE3DQ9BYE3 92 aa2.97□□□□□ -1.93
TRA2B-212ENST00000480461 NDUFAF8A1L188 74 aa2.91□□□□□ -1.94
TRA2B-212ENST00000480461 LCE3EQ5T5B0 92 aa2.84□□□□□ -1.95
TRA2B-212ENST00000480461 LCE1BQ5T7P3 118 aa2.83□□□□□ -1.96
TRA2B-212ENST00000480461 LCE1CQ5T751 118 aa2.82□□□□□ -1.96
TRA2B-212ENST00000480461 LCE1FQ5T754 118 aa2.65□□□□□ -1.99
TRA2B-212ENST00000480461 PHGR1C9JFL3 82 aa2.56□□□□□ -2
TRA2B-212ENST00000480461 KRTAP21-2Q3LI59 83 aa2.45□□□□□ -2.02
TRA2B-212ENST00000480461 A0A0A0MQY5 61 aa2.34□□□□□ -2.03
TRA2B-212ENST00000480461 INE1O15225 51 aa2.33□□□□□ -2.04
TRA2B-212ENST00000480461 PRM1P04553 51 aa2.3□□□□□ -2.04
TRA2B-212ENST00000480461 MUC19Q7Z5P9 8384 aa2.17□□□□□ -2.06
TRA2B-212ENST00000480461 KRTAP21-1Q3LI58 79 aa1.94□□□□□ -2.1
TRA2B-212ENST00000480461 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 9.8 ms