RNA–Protein interactions for RNA: ENST00000480003.5

CD46-214, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CD46, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-214ENST00000480003 A6NED7 52 aa3.87□□□□□ -1.79
CD46-214ENST00000480003 LCE1FQ5T754 118 aa3.84□□□□□ -1.79
CD46-214ENST00000480003 KRTAP10-12P60413 245 aa3.83□□□□□ -1.8
CD46-214ENST00000480003 C10orf95Q9H7T3 257 aa3.81□□□□□ -1.8
CD46-214ENST00000480003 MUC12Q9UKN1 5478 aa3.81□□□□□ -1.8
CD46-214ENST00000480003 KRTAP5-9P26371 169 aa3.79□□□□□ -1.8
CD46-214ENST00000480003 KRTAP5-1Q6L8H4 278 aa3.79□□□□□ -1.8
CD46-214ENST00000480003 CDC42SE1Q9NRR8 79 aa3.79□□□□□ -1.8
CD46-214ENST00000480003 K7ERS5 55 aa3.77□□□□□ -1.81
CD46-214ENST00000480003 KRTAP9-6A8MVA2 160 aa3.75□□□□□ -1.81
CD46-214ENST00000480003 KRTAP2-3P0C7H8 128 aa3.73□□□□□ -1.81
CD46-214ENST00000480003 KRTAP2-4Q9BYR9 128 aa3.73□□□□□ -1.81
CD46-214ENST00000480003 KMT2DO14686 5537 aa3.72□□□□□ -1.81
CD46-214ENST00000480003 TNP1P09430 55 aa3.7□□□□□ -1.82
CD46-214ENST00000480003 KRTAP8-1Q8IUC2 63 aa3.68□□□□□ -1.82
CD46-214ENST00000480003 MDN1Q9NU22 5596 aa3.66□□□□□ -1.82
CD46-214ENST00000480003 KRTAP4-4Q9BYR3 166 aa3.64□□□□□ -1.83
CD46-214ENST00000480003 SPRR2EP22531 72 aa3.63□□□□□ -1.83
CD46-214ENST00000480003 SPRR2BP35325 72 aa3.63□□□□□ -1.83
CD46-214ENST00000480003 SPRR2AP35326 72 aa3.63□□□□□ -1.83
CD46-214ENST00000480003 KRTAP25-1Q3LHN0 102 aa3.63□□□□□ -1.83
CD46-214ENST00000480003 KRTAP5-4Q6L8H1 288 aa3.63□□□□□ -1.83
CD46-214ENST00000480003 SPRR2FQ96RM1 72 aa3.63□□□□□ -1.83
CD46-214ENST00000480003 LCE3CQ5T5A8 94 aa3.62□□□□□ -1.83
CD46-214ENST00000480003 BRK1Q8WUW1 75 aa3.62□□□□□ -1.83
CD46-214ENST00000480003 KRTAP2-1Q9BYU5 128 aa3.61□□□□□ -1.83
CD46-214ENST00000480003 ROMO1P60602 79 aa3.6□□□□□ -1.83
CD46-214ENST00000480003 KRTAP19-7Q3SYF9 63 aa3.6□□□□□ -1.83
CD46-214ENST00000480003 LCE3AQ5TA76 89 aa3.6□□□□□ -1.83
CD46-214ENST00000480003 KRTAP19-5Q3LI72 72 aa3.55□□□□□ -1.84
CD46-214ENST00000480003 MT1EP04732 61 aa3.53□□□□□ -1.84
CD46-214ENST00000480003 SPRR2DP22532 72 aa3.52□□□□□ -1.85
CD46-214ENST00000480003 KRTAP12-3P60328 96 aa3.46□□□□□ -1.86
CD46-214ENST00000480003 PMAIP1Q13794 54 aa3.45□□□□□ -1.86
CD46-214ENST00000480003 KRTAP19-3Q7Z4W3 81 aa3.45□□□□□ -1.86
CD46-214ENST00000480003 PP632Q6XCG6 107 aa3.44□□□□□ -1.86
CD46-214ENST00000480003 PRO0628Q9UI54 55 aa3.44□□□□□ -1.86
CD46-214ENST00000480003 MT1LQ93083 61 aa3.43□□□□□ -1.86
CD46-214ENST00000480003 MT1GP13640 62 aa3.42□□□□□ -1.86
CD46-214ENST00000480003 OBSCNQ5VST9 7968 aa3.41□□□□□ -1.86
CD46-214ENST00000480003 GPR98Q8WXG9 6306 aa3.35□□□□□ -1.87
CD46-214ENST00000480003 MT1MQ8N339 61 aa3.34□□□□□ -1.87
CD46-214ENST00000480003 NDUFAF8A1L188 74 aa3.32□□□□□ -1.88
CD46-214ENST00000480003 LCE3EQ5T5B0 92 aa3.3□□□□□ -1.88
CD46-214ENST00000480003 DSTQ03001 7570 aaKnown RBP3.27□□□□□ -1.89
CD46-214ENST00000480003 PRAC1Q96KF2 57 aa3.26□□□□□ -1.89
CD46-214ENST00000480003 KRTAP4-3Q9BYR4 195 aa3.26□□□□□ -1.89
CD46-214ENST00000480003 KTN1-AS1Q86SY8 53 aa3.2□□□□□ -1.9
CD46-214ENST00000480003 MT4P47944 62 aa3.08□□□□□ -1.92
CD46-214ENST00000480003 KRTAP5-5Q701N2 237 aaPredicted RBP3.06□□□□□ -1.92
CD46-214ENST00000480003 HMCN1Q96RW7 5635 aa3.04□□□□□ -1.92
CD46-214ENST00000480003 KRTAP5-10Q6L8G5 202 aa3.04□□□□□ -1.92
CD46-214ENST00000480003 KRTAP5-2Q701N4 177 aa3.01□□□□□ -1.93
CD46-214ENST00000480003 AHNAK2Q8IVF2 5795 aa2.99□□□□□ -1.93
CD46-214ENST00000480003 SPRR5A0A1B0GTR4 108 aa2.98□□□□□ -1.93
CD46-214ENST00000480003 KRTAP5-7Q6L8G8 165 aa2.96□□□□□ -1.94
CD46-214ENST00000480003 MT1AP04731 61 aa2.92□□□□□ -1.94
CD46-214ENST00000480003 SYNE1Q8NF91 8797 aaKnown RBP2.9□□□□□ -1.95
CD46-214ENST00000480003 KRTAP6-1Q3LI64 71 aa2.89□□□□□ -1.95
CD46-214ENST00000480003 KRTAP12-4P60329 112 aa2.87□□□□□ -1.95
CD46-214ENST00000480003 KRTAP20-2Q3LI61 65 aa2.84□□□□□ -1.95
CD46-214ENST00000480003 LCE1CQ5T751 118 aa2.78□□□□□ -1.96
CD46-214ENST00000480003 LCE1BQ5T7P3 118 aa2.78□□□□□ -1.96
CD46-214ENST00000480003 KRTAP6-2Q3LI66 62 aa2.69□□□□□ -1.98
CD46-214ENST00000480003 LUZP6Q538Z0 58 aa2.66□□□□□ -1.98
CD46-214ENST00000480003 LCE3DQ9BYE3 92 aa2.61□□□□□ -1.99
CD46-214ENST00000480003 MUC5ACP98088 5654 aa2.56□□□□□ -2
CD46-214ENST00000480003 KRTAP5-8O75690 187 aa2.55□□□□□ -2
CD46-214ENST00000480003 AHNAKQ09666 5890 aaKnown RBP2.54□□□□□ -2
CD46-214ENST00000480003 MUC5BQ9HC84 5762 aaPredicted RBP2.49□□□□□ -2.01
CD46-214ENST00000480003 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
CD46-214ENST00000480003 INE1O15225 51 aa2.01□□□□□ -2.09
CD46-214ENST00000480003 KRTAP21-2Q3LI59 83 aa2.01□□□□□ -2.09
CD46-214ENST00000480003 PRM1P04553 51 aa1.86□□□□□ -2.11
CD46-214ENST00000480003 PHGR1C9JFL3 82 aa1.8□□□□□ -2.12
CD46-214ENST00000480003 KRTAP21-1Q3LI58 79 aa1.39□□□□□ -2.19
CD46-214ENST00000480003 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 22.8 ms