RNA–Protein interactions for RNA: ENST00000479994.1

HCLS1-206, Transcript of hematopoietic cell-specific Lyn substrate 1, human

TSL 3

Gene HCLS1, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCLS1-206	ENST00000479994	KRTAP10-12	P60413	245 aa		4.59	□□□□□ -1.67
HCLS1-206	ENST00000479994	HMCN1	Q96RW7	5635 aa		4.56	□□□□□ -1.68
HCLS1-206	ENST00000479994	KRTAP5-10	Q6L8G5	202 aa		4.54	□□□□□ -1.68
HCLS1-206	ENST00000479994	KRTAP10-7	P60409	375 aa	Predicted RBP	4.53	□□□□□ -1.68
HCLS1-206	ENST00000479994	PMAIP1	Q13794	54 aa		4.53	□□□□□ -1.68
HCLS1-206	ENST00000479994	KRTAP23-1	A1A580	65 aa		4.51	□□□□□ -1.69
HCLS1-206	ENST00000479994	KRTAP5-7	Q6L8G8	165 aa		4.47	□□□□□ -1.69
HCLS1-206	ENST00000479994	PP632	Q6XCG6	107 aa		4.46	□□□□□ -1.7
HCLS1-206	ENST00000479994	KRTAP8-1	Q8IUC2	63 aa		4.46	□□□□□ -1.7
HCLS1-206	ENST00000479994	SPRR5	A0A1B0GTR4	108 aa		4.43	□□□□□ -1.7
HCLS1-206	ENST00000479994	LCE1D	Q5T752	114 aa		4.4	□□□□□ -1.71
HCLS1-206	ENST00000479994	KRTAP4-8	A0A0G2JLE6	195 aa		4.37	□□□□□ -1.71
HCLS1-206	ENST00000479994	LCE3A	Q5TA76	89 aa		4.37	□□□□□ -1.71
HCLS1-206	ENST00000479994	KRTAP4-8	Q9BYQ9	185 aa		4.37	□□□□□ -1.71
HCLS1-206	ENST00000479994	KTN1-AS1	Q86SY8	53 aa		4.29	□□□□□ -1.72
HCLS1-206	ENST00000479994	KRTAP12-3	P60328	96 aa		4.26	□□□□□ -1.73
HCLS1-206	ENST00000479994	KRTAP19-5	Q3LI72	72 aa		4.26	□□□□□ -1.73
HCLS1-206	ENST00000479994	KRTAP19-7	Q3SYF9	63 aa		4.25	□□□□□ -1.73
HCLS1-206	ENST00000479994	KRTAP19-4	Q3LI73	84 aa		4.24	□□□□□ -1.73
HCLS1-206	ENST00000479994	MT4	P47944	62 aa		4.23	□□□□□ -1.73
HCLS1-206	ENST00000479994	KRTAP5-3	Q6L8H2	238 aa		4.23	□□□□□ -1.73
HCLS1-206	ENST00000479994	MT1E	P04732	61 aa		4.22	□□□□□ -1.73
HCLS1-206	ENST00000479994	KRTAP15-1	Q3LI76	137 aa		4.14	□□□□□ -1.75
HCLS1-206	ENST00000479994	AHNAK	Q09666	5890 aa	Known RBP	4.13	□□□□□ -1.75
HCLS1-206	ENST00000479994	KRTAP19-3	Q7Z4W3	81 aa		4.13	□□□□□ -1.75
HCLS1-206	ENST00000479994	PRAC1	Q96KF2	57 aa		4.13	□□□□□ -1.75
HCLS1-206	ENST00000479994	MT1G	P13640	62 aa		4.12	□□□□□ -1.75
HCLS1-206	ENST00000479994	LCE4A	Q5TA78	99 aa		4.12	□□□□□ -1.75
HCLS1-206	ENST00000479994	MT1L	Q93083	61 aa		4.1	□□□□□ -1.75
HCLS1-206	ENST00000479994	LCE5A	Q5TCM9	118 aa		4.07	□□□□□ -1.76
HCLS1-206	ENST00000479994	KRTAP4-6	Q9BYQ5	205 aa		4.04	□□□□□ -1.76
HCLS1-206	ENST00000479994	SVIP	Q8NHG7	77 aa		4.03	□□□□□ -1.76
HCLS1-206	ENST00000479994	MT1M	Q8N339	61 aa		3.99	□□□□□ -1.77
HCLS1-206	ENST00000479994	MUC5AC	P98088	5654 aa		3.99	□□□□□ -1.77
HCLS1-206	ENST00000479994	LCE3C	Q5T5A8	94 aa		3.97	□□□□□ -1.77
HCLS1-206	ENST00000479994	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.94	□□□□□ -1.78
HCLS1-206	ENST00000479994	KRTAP5-4	Q6L8H1	288 aa		3.91	□□□□□ -1.78
HCLS1-206	ENST00000479994	KRTAP4-7	Q9BYR0	210 aa		3.81	□□□□□ -1.8
HCLS1-206	ENST00000479994	KRTAP4-3	Q9BYR4	195 aa		3.77	□□□□□ -1.81
HCLS1-206	ENST00000479994	KRTAP20-2	Q3LI61	65 aa		3.75	□□□□□ -1.81
HCLS1-206	ENST00000479994	KRTAP5-8	O75690	187 aa		3.63	□□□□□ -1.83
HCLS1-206	ENST00000479994	LUZP6	Q538Z0	58 aa		3.63	□□□□□ -1.83
HCLS1-206	ENST00000479994	KRTAP4-11	Q9BYQ6	195 aa		3.63	□□□□□ -1.83
HCLS1-206	ENST00000479994	KRTAP9-6	A8MVA2	160 aa		3.61	□□□□□ -1.83
HCLS1-206	ENST00000479994	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.61	□□□□□ -1.83
HCLS1-206	ENST00000479994	LOC100996750	A0A140TA64	210 aa		3.6	□□□□□ -1.83
HCLS1-206	ENST00000479994	MT1A	P04731	61 aa		3.53	□□□□□ -1.84
HCLS1-206	ENST00000479994	KRTAP12-4	P60329	112 aa		3.51	□□□□□ -1.85
HCLS1-206	ENST00000479994	KRTAP9-9	Q9BYP9	154 aa		3.49	□□□□□ -1.85
HCLS1-206	ENST00000479994	SYNE1	Q8NF91	8797 aa	Known RBP	3.48	□□□□□ -1.85
HCLS1-206	ENST00000479994	KRTAP6-1	Q3LI64	71 aa		3.41	□□□□□ -1.86
HCLS1-206	ENST00000479994	KRTAP5-2	Q701N4	177 aa		3.4	□□□□□ -1.87
HCLS1-206	ENST00000479994	OBSCN	Q5VST9	7968 aa		3.39	□□□□□ -1.87
HCLS1-206	ENST00000479994	KRTAP9-4	Q9BYQ2	154 aa		3.36	□□□□□ -1.87
HCLS1-206	ENST00000479994	MT3	P25713	68 aa		3.24	□□□□□ -1.89
HCLS1-206	ENST00000479994	NDUFAF8	A1L188	74 aa		3.22	□□□□□ -1.89
HCLS1-206	ENST00000479994	KRTAP6-2	Q3LI66	62 aa		3.2	□□□□□ -1.9
HCLS1-206	ENST00000479994	KRTAP5-1	Q6L8H4	278 aa		3.1	□□□□□ -1.91
HCLS1-206	ENST00000479994	LCE3D	Q9BYE3	92 aa		2.97	□□□□□ -1.93
HCLS1-206	ENST00000479994		A0A0A0MQY5	61 aa		2.92	□□□□□ -1.94
HCLS1-206	ENST00000479994	LCE1E	Q5T753	118 aa		2.91	□□□□□ -1.94
HCLS1-206	ENST00000479994	LCE3E	Q5T5B0	92 aa		2.86	□□□□□ -1.95
HCLS1-206	ENST00000479994	KRTAP4-2	Q9BYR5	136 aa		2.82	□□□□□ -1.96
HCLS1-206	ENST00000479994	INE1	O15225	51 aa		2.8	□□□□□ -1.96
HCLS1-206	ENST00000479994	KRTAP4-12	Q9BQ66	201 aa		2.69	□□□□□ -1.98
HCLS1-206	ENST00000479994	PHGR1	C9JFL3	82 aa		2.68	□□□□□ -1.98
HCLS1-206	ENST00000479994	LCE1C	Q5T751	118 aa		2.67	□□□□□ -1.98
HCLS1-206	ENST00000479994	LCE1B	Q5T7P3	118 aa		2.67	□□□□□ -1.98
HCLS1-206	ENST00000479994	KRTAP5-11	Q6L8G4	156 aa		2.55	□□□□□ -2
HCLS1-206	ENST00000479994	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.49	□□□□□ -2.01
HCLS1-206	ENST00000479994		H3BS24	57 aa		2.41	□□□□□ -2.02
HCLS1-206	ENST00000479994	LCE1F	Q5T754	118 aa		2.41	□□□□□ -2.02
HCLS1-206	ENST00000479994	PRM1	P04553	51 aa		2.33	□□□□□ -2.04
HCLS1-206	ENST00000479994	KRTAP21-2	Q3LI59	83 aa		2.25	□□□□□ -2.05
HCLS1-206	ENST00000479994	MUC19	Q7Z5P9	8384 aa		2.16	□□□□□ -2.06
HCLS1-206	ENST00000479994	KRTAP21-1	Q3LI58	79 aa		2.02	□□□□□ -2.09
HCLS1-206	ENST00000479994	KRTAP4-4	Q9BYR3	166 aa		1.93	□□□□□ -2.1
HCLS1-206	ENST00000479994	MUC16	Q8WXI7	14507 aa		1.45	□□□□□ -2.18

Retrieved 78 of 20,778 RNA–protein pairs in 163 ms