RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-238ENST00000479894 KRTAP5-10Q6L8G5 202 aa6.05□□□□□ -1.44
HDLBP-238ENST00000479894 AHNAK2Q8IVF2 5795 aa6.02□□□□□ -1.45
HDLBP-238ENST00000479894 TNP1P09430 55 aa6□□□□□ -1.45
HDLBP-238ENST00000479894 LCE5AQ5TCM9 118 aa5.99□□□□□ -1.45
HDLBP-238ENST00000479894 LCE4AQ5TA78 99 aa5.96□□□□□ -1.46
HDLBP-238ENST00000479894 C10orf95Q9H7T3 257 aa5.96□□□□□ -1.46
HDLBP-238ENST00000479894 KRTAP5-7Q6L8G8 165 aa5.93□□□□□ -1.46
HDLBP-238ENST00000479894 MT4P47944 62 aa5.92□□□□□ -1.46
HDLBP-238ENST00000479894 KRTAP25-1Q3LHN0 102 aa5.89□□□□□ -1.47
HDLBP-238ENST00000479894 KRTAP19-3Q7Z4W3 81 aa5.88□□□□□ -1.47
HDLBP-238ENST00000479894 BRK1Q8WUW1 75 aa5.84□□□□□ -1.47
HDLBP-238ENST00000479894 ROMO1P60602 79 aa5.81□□□□□ -1.48
HDLBP-238ENST00000479894 KRTAP19-7Q3SYF9 63 aa5.78□□□□□ -1.48
HDLBP-238ENST00000479894 MT1EP04732 61 aa5.75□□□□□ -1.49
HDLBP-238ENST00000479894 KRTAP5-3Q6L8H2 238 aa5.74□□□□□ -1.49
HDLBP-238ENST00000479894 KRTAP23-1A1A580 65 aa5.72□□□□□ -1.49
HDLBP-238ENST00000479894 KRTAP5-4Q6L8H1 288 aa5.72□□□□□ -1.49
HDLBP-238ENST00000479894 KRTAP4-6Q9BYQ5 205 aa5.69□□□□□ -1.5
HDLBP-238ENST00000479894 LCE3AQ5TA76 89 aa5.68□□□□□ -1.5
HDLBP-238ENST00000479894 SPRR5A0A1B0GTR4 108 aa5.66□□□□□ -1.5
HDLBP-238ENST00000479894 MT1GP13640 62 aa5.66□□□□□ -1.5
HDLBP-238ENST00000479894 PP632Q6XCG6 107 aa5.64□□□□□ -1.51
HDLBP-238ENST00000479894 KRTAP19-5Q3LI72 72 aa5.61□□□□□ -1.51
HDLBP-238ENST00000479894 PMAIP1Q13794 54 aa5.56□□□□□ -1.52
HDLBP-238ENST00000479894 KRTAP12-3P60328 96 aa5.54□□□□□ -1.52
HDLBP-238ENST00000479894 MT1MQ8N339 61 aa5.53□□□□□ -1.52
HDLBP-238ENST00000479894 PRO0628Q9UI54 55 aa5.53□□□□□ -1.52
HDLBP-238ENST00000479894 KRTAP19-4Q3LI73 84 aa5.44□□□□□ -1.54
HDLBP-238ENST00000479894 KRTAP20-2Q3LI61 65 aa5.42□□□□□ -1.54
HDLBP-238ENST00000479894 SVIPQ8NHG7 77 aa5.41□□□□□ -1.54
HDLBP-238ENST00000479894 MT1LQ93083 61 aa5.4□□□□□ -1.54
HDLBP-238ENST00000479894 KRTAP4-3Q9BYR4 195 aa5.37□□□□□ -1.55
HDLBP-238ENST00000479894 KRTAP15-1Q3LI76 137 aa5.34□□□□□ -1.55
HDLBP-238ENST00000479894 KRTAP12-4P60329 112 aa5.2□□□□□ -1.58
HDLBP-238ENST00000479894 KRTAP5-5Q701N2 237 aaPredicted RBP5.16□□□□□ -1.58
HDLBP-238ENST00000479894 KTN1-AS1Q86SY8 53 aa5.16□□□□□ -1.58
HDLBP-238ENST00000479894 AHNAKQ09666 5890 aaKnown RBP5.14□□□□□ -1.59
HDLBP-238ENST00000479894 LCE3CQ5T5A8 94 aa5.14□□□□□ -1.59
HDLBP-238ENST00000479894 KRTAP4-11Q9BYQ6 195 aa5.12□□□□□ -1.59
HDLBP-238ENST00000479894 KRTAP4-7Q9BYR0 210 aa5.12□□□□□ -1.59
HDLBP-238ENST00000479894 MUC5ACP98088 5654 aa5.1□□□□□ -1.59
HDLBP-238ENST00000479894 PRAC1Q96KF2 57 aa5.1□□□□□ -1.59
HDLBP-238ENST00000479894 MUC5BQ9HC84 5762 aaPredicted RBP5.06□□□□□ -1.6
HDLBP-238ENST00000479894 SYNE1Q8NF91 8797 aaKnown RBP5□□□□□ -1.61
HDLBP-238ENST00000479894 KRTAP5-8O75690 187 aa4.99□□□□□ -1.61
HDLBP-238ENST00000479894 KRTAP5-2Q701N4 177 aa4.88□□□□□ -1.63
HDLBP-238ENST00000479894 LOC100996750A0A140TA64 210 aa4.85□□□□□ -1.63
HDLBP-238ENST00000479894 KRTAP9-9Q9BYP9 154 aa4.84□□□□□ -1.63
HDLBP-238ENST00000479894 KRTAP9-6A8MVA2 160 aa4.7□□□□□ -1.66
HDLBP-238ENST00000479894 OBSCNQ5VST9 7968 aa4.65□□□□□ -1.67
HDLBP-238ENST00000479894 MT1AP04731 61 aa4.63□□□□□ -1.67
HDLBP-238ENST00000479894 KRTAP6-1Q3LI64 71 aa4.57□□□□□ -1.68
HDLBP-238ENST00000479894 KRTAP9-4Q9BYQ2 154 aa4.55□□□□□ -1.68
HDLBP-238ENST00000479894 KRTAP6-2Q3LI66 62 aa4.5□□□□□ -1.69
HDLBP-238ENST00000479894 KRTAP5-1Q6L8H4 278 aa4.5□□□□□ -1.69
HDLBP-238ENST00000479894 LUZP6Q538Z0 58 aa4.48□□□□□ -1.69
HDLBP-238ENST00000479894 MT3P25713 68 aa4.28□□□□□ -1.72
HDLBP-238ENST00000479894 LCE1EQ5T753 118 aa4.08□□□□□ -1.76
HDLBP-238ENST00000479894 H3BS24 57 aa3.97□□□□□ -1.77
HDLBP-238ENST00000479894 KRTAP4-2Q9BYR5 136 aa3.89□□□□□ -1.79
HDLBP-238ENST00000479894 NDUFAF8A1L188 74 aa3.88□□□□□ -1.79
HDLBP-238ENST00000479894 A0A0A0MQY5 61 aa3.87□□□□□ -1.79
HDLBP-238ENST00000479894 LCE3DQ9BYE3 92 aa3.83□□□□□ -1.8
HDLBP-238ENST00000479894 LCE1BQ5T7P3 118 aa3.82□□□□□ -1.8
HDLBP-238ENST00000479894 LCE1CQ5T751 118 aa3.79□□□□□ -1.8
HDLBP-238ENST00000479894 KRTAP4-12Q9BQ66 201 aa3.72□□□□□ -1.81
HDLBP-238ENST00000479894 LCE3EQ5T5B0 92 aa3.67□□□□□ -1.82
HDLBP-238ENST00000479894 KRTAP5-11Q6L8G4 156 aa3.63□□□□□ -1.83
HDLBP-238ENST00000479894 LCE1FQ5T754 118 aa3.58□□□□□ -1.84
HDLBP-238ENST00000479894 PHGR1C9JFL3 82 aa3.54□□□□□ -1.84
HDLBP-238ENST00000479894 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.37□□□□□ -1.87
HDLBP-238ENST00000479894 INE1O15225 51 aa3.33□□□□□ -1.88
HDLBP-238ENST00000479894 KRTAP21-2Q3LI59 83 aa3.03□□□□□ -1.92
HDLBP-238ENST00000479894 PRM1P04553 51 aa2.93□□□□□ -1.94
HDLBP-238ENST00000479894 MUC19Q7Z5P9 8384 aa2.89□□□□□ -1.95
HDLBP-238ENST00000479894 KRTAP4-4Q9BYR3 166 aa2.84□□□□□ -1.95
HDLBP-238ENST00000479894 KRTAP21-1Q3LI58 79 aa2.73□□□□□ -1.97
HDLBP-238ENST00000479894 MUC16Q8WXI7 14507 aa2.03□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 6.5 ms