RNA–Protein interactions for RNA: ENST00000479381.5

CMTM1-208, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 995 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-208ENST00000479381 SPRR2BP35325 72 aa3.71□□□□□ -1.82
CMTM1-208ENST00000479381 SPRR2AP35326 72 aa3.71□□□□□ -1.82
CMTM1-208ENST00000479381 KTN1-AS1Q86SY8 53 aa3.69□□□□□ -1.82
CMTM1-208ENST00000479381 KRTAP12-2P59991 146 aa3.68□□□□□ -1.82
CMTM1-208ENST00000479381 A0A0D9SG42 100 aa3.67□□□□□ -1.82
CMTM1-208ENST00000479381 A0A1B0GU33 70 aa3.67□□□□□ -1.82
CMTM1-208ENST00000479381 MDN1Q9NU22 5596 aa3.66□□□□□ -1.82
CMTM1-208ENST00000479381 UQCR11O14957 56 aa3.66□□□□□ -1.82
CMTM1-208ENST00000479381 SPINT4Q6UDR6 99 aa3.64□□□□□ -1.83
CMTM1-208ENST00000479381 A6NED7 52 aa3.63□□□□□ -1.83
CMTM1-208ENST00000479381 KRTAP13-4Q3LI77 160 aa3.63□□□□□ -1.83
CMTM1-208ENST00000479381 SPATA8Q6RVD6 105 aa3.6□□□□□ -1.83
CMTM1-208ENST00000479381 KRTAP2-3P0C7H8 128 aa3.59□□□□□ -1.83
CMTM1-208ENST00000479381 MIR22HGQ0VDD5 57 aa3.59□□□□□ -1.83
CMTM1-208ENST00000479381 KRTAP2-4Q9BYR9 128 aa3.59□□□□□ -1.83
CMTM1-208ENST00000479381 CDC42SE1Q9NRR8 79 aa3.59□□□□□ -1.83
CMTM1-208ENST00000479381 SPRR2DP22532 72 aa3.58□□□□□ -1.84
CMTM1-208ENST00000479381 KRTAP10-12P60413 245 aa3.58□□□□□ -1.84
CMTM1-208ENST00000479381 K7ERS5 55 aa3.51□□□□□ -1.85
CMTM1-208ENST00000479381 A8MU10 97 aa3.5□□□□□ -1.85
CMTM1-208ENST00000479381 KRTAP2-1Q9BYU5 128 aa3.48□□□□□ -1.85
CMTM1-208ENST00000479381 NDUFAF8A1L188 74 aa3.47□□□□□ -1.85
CMTM1-208ENST00000479381 KRTAP12-1P59990 96 aa3.47□□□□□ -1.85
CMTM1-208ENST00000479381 LCE1FQ5T754 118 aa3.47□□□□□ -1.85
CMTM1-208ENST00000479381 PRAC1Q96KF2 57 aa3.41□□□□□ -1.86
CMTM1-208ENST00000479381 TNP1P09430 55 aa3.39□□□□□ -1.87
CMTM1-208ENST00000479381 MT1EP04732 61 aa3.36□□□□□ -1.87
CMTM1-208ENST00000479381 KRTAP19-5Q3LI72 72 aa3.35□□□□□ -1.87
CMTM1-208ENST00000479381 KRTAP19-7Q3SYF9 63 aa3.35□□□□□ -1.87
CMTM1-208ENST00000479381 KRTAP19-3Q7Z4W3 81 aa3.35□□□□□ -1.87
CMTM1-208ENST00000479381 KRTAP9-6A8MVA2 160 aa3.32□□□□□ -1.88
CMTM1-208ENST00000479381 PP632Q6XCG6 107 aa3.32□□□□□ -1.88
CMTM1-208ENST00000479381 LCE3CQ5T5A8 94 aa3.31□□□□□ -1.88
CMTM1-208ENST00000479381 LCE3AQ5TA76 89 aa3.3□□□□□ -1.88
CMTM1-208ENST00000479381 C10orf95Q9H7T3 257 aa3.3□□□□□ -1.88
CMTM1-208ENST00000479381 ROMO1P60602 79 aa3.29□□□□□ -1.88
CMTM1-208ENST00000479381 DSTQ03001 7570 aaKnown RBP3.28□□□□□ -1.88
CMTM1-208ENST00000479381 KRTAP5-1Q6L8H4 278 aa3.28□□□□□ -1.88
CMTM1-208ENST00000479381 MT1GP13640 62 aa3.26□□□□□ -1.89
CMTM1-208ENST00000479381 KRTAP25-1Q3LHN0 102 aa3.22□□□□□ -1.89
CMTM1-208ENST00000479381 MT1MQ8N339 61 aa3.21□□□□□ -1.9
CMTM1-208ENST00000479381 MT1LQ93083 61 aa3.21□□□□□ -1.9
CMTM1-208ENST00000479381 KRTAP5-4Q6L8H1 288 aa3.19□□□□□ -1.9
CMTM1-208ENST00000479381 KRTAP12-3P60328 96 aa3.18□□□□□ -1.9
CMTM1-208ENST00000479381 KRTAP4-4Q9BYR3 166 aa3.16□□□□□ -1.9
CMTM1-208ENST00000479381 MT4P47944 62 aa3.14□□□□□ -1.91
CMTM1-208ENST00000479381 KRTAP4-3Q9BYR4 195 aa3.14□□□□□ -1.91
CMTM1-208ENST00000479381 GPR98Q8WXG9 6306 aa3.07□□□□□ -1.92
CMTM1-208ENST00000479381 LCE3EQ5T5B0 92 aa3.01□□□□□ -1.93
CMTM1-208ENST00000479381 HMCN1Q96RW7 5635 aa2.99□□□□□ -1.93
CMTM1-208ENST00000479381 KRTAP12-4P60329 112 aa2.92□□□□□ -1.94
CMTM1-208ENST00000479381 AHNAK2Q8IVF2 5795 aa2.9□□□□□ -1.95
CMTM1-208ENST00000479381 LUZP6Q538Z0 58 aa2.9□□□□□ -1.95
CMTM1-208ENST00000479381 KRTAP20-2Q3LI61 65 aa2.87□□□□□ -1.95
CMTM1-208ENST00000479381 KRTAP5-5Q701N2 237 aaPredicted RBP2.86□□□□□ -1.95
CMTM1-208ENST00000479381 SYNE1Q8NF91 8797 aaKnown RBP2.86□□□□□ -1.95
CMTM1-208ENST00000479381 OBSCNQ5VST9 7968 aa2.84□□□□□ -1.96
CMTM1-208ENST00000479381 SPRR5A0A1B0GTR4 108 aa2.83□□□□□ -1.96
CMTM1-208ENST00000479381 KRTAP5-10Q6L8G5 202 aa2.81□□□□□ -1.96
CMTM1-208ENST00000479381 MT1AP04731 61 aa2.75□□□□□ -1.97
CMTM1-208ENST00000479381 KRTAP6-1Q3LI64 71 aa2.73□□□□□ -1.97
CMTM1-208ENST00000479381 KRTAP5-7Q6L8G8 165 aa2.7□□□□□ -1.98
CMTM1-208ENST00000479381 KRTAP5-2Q701N4 177 aa2.67□□□□□ -1.98
CMTM1-208ENST00000479381 KRTAP6-2Q3LI66 62 aa2.62□□□□□ -1.99
CMTM1-208ENST00000479381 INE1O15225 51 aa2.54□□□□□ -2
CMTM1-208ENST00000479381 KRTAP5-8O75690 187 aa2.49□□□□□ -2.01
CMTM1-208ENST00000479381 LCE1CQ5T751 118 aa2.49□□□□□ -2.01
CMTM1-208ENST00000479381 LCE1BQ5T7P3 118 aa2.49□□□□□ -2.01
CMTM1-208ENST00000479381 LCE3DQ9BYE3 92 aa2.44□□□□□ -2.02
CMTM1-208ENST00000479381 AHNAKQ09666 5890 aaKnown RBP2.37□□□□□ -2.03
CMTM1-208ENST00000479381 MUC5BQ9HC84 5762 aaPredicted RBP2.37□□□□□ -2.03
CMTM1-208ENST00000479381 MUC5ACP98088 5654 aa2.33□□□□□ -2.04
CMTM1-208ENST00000479381 MUC19Q7Z5P9 8384 aa1.99□□□□□ -2.09
CMTM1-208ENST00000479381 KRTAP21-2Q3LI59 83 aa1.75□□□□□ -2.13
CMTM1-208ENST00000479381 PHGR1C9JFL3 82 aa1.72□□□□□ -2.13
CMTM1-208ENST00000479381 PRM1P04553 51 aa1.68□□□□□ -2.14
CMTM1-208ENST00000479381 KRTAP21-1Q3LI58 79 aa1.29□□□□□ -2.2
CMTM1-208ENST00000479381 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 33.8 ms