RNA–Protein interactions for RNA: ENST00000478677.1

AGRN-207, Transcript of agrin, humanhuman

TSL 2

Gene AGRN, Length 276 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-207ENST00000478677 SPINT4Q6UDR6 99 aa4.84□□□□□ -1.63
AGRN-207ENST00000478677 KRTAP4-9Q9BYQ8 210 aa4.84□□□□□ -1.63
AGRN-207ENST00000478677 PRO2289Q9P1D8 64 aa4.84□□□□□ -1.63
AGRN-207ENST00000478677 HMCN1Q96RW7 5635 aa4.79□□□□□ -1.64
AGRN-207ENST00000478677 AHNAK2Q8IVF2 5795 aa4.73□□□□□ -1.65
AGRN-207ENST00000478677 A0A1B0GU33 70 aa4.72□□□□□ -1.65
AGRN-207ENST00000478677 LCE5AQ5TCM9 118 aa4.71□□□□□ -1.66
AGRN-207ENST00000478677 KRTAP3-2Q9BYR7 98 aa4.69□□□□□ -1.66
AGRN-207ENST00000478677 LCE1DQ5T752 114 aa4.68□□□□□ -1.66
AGRN-207ENST00000478677 PLAC4Q8WY50 150 aa4.68□□□□□ -1.66
AGRN-207ENST00000478677 KRTAP19-7Q3SYF9 63 aa4.66□□□□□ -1.66
AGRN-207ENST00000478677 KRTAP5-10Q6L8G5 202 aa4.62□□□□□ -1.67
AGRN-207ENST00000478677 MT1EP04732 61 aa4.58□□□□□ -1.68
AGRN-207ENST00000478677 KRTAP19-3Q7Z4W3 81 aa4.56□□□□□ -1.68
AGRN-207ENST00000478677 R4GN34 69 aa4.56□□□□□ -1.68
AGRN-207ENST00000478677 M0QZ58 72 aa4.55□□□□□ -1.68
AGRN-207ENST00000478677 MT4P47944 62 aa4.49□□□□□ -1.69
AGRN-207ENST00000478677 KRTAP5-4Q6L8H1 288 aa4.49□□□□□ -1.69
AGRN-207ENST00000478677 LCE4AQ5TA78 99 aa4.46□□□□□ -1.7
AGRN-207ENST00000478677 KRTAP4-6Q9BYQ5 205 aa4.46□□□□□ -1.7
AGRN-207ENST00000478677 KRTAP5-7Q6L8G8 165 aa4.45□□□□□ -1.7
AGRN-207ENST00000478677 KRTAP5-3Q6L8H2 238 aa4.37□□□□□ -1.71
AGRN-207ENST00000478677 MT1MQ8N339 61 aa4.37□□□□□ -1.71
AGRN-207ENST00000478677 KRTAP4-3Q9BYR4 195 aa4.37□□□□□ -1.71
AGRN-207ENST00000478677 MT1GP13640 62 aa4.35□□□□□ -1.71
AGRN-207ENST00000478677 INE1O15225 51 aa4.33□□□□□ -1.72
AGRN-207ENST00000478677 KRTAP19-5Q3LI72 72 aa4.32□□□□□ -1.72
AGRN-207ENST00000478677 KRTAP13-4Q3LI77 160 aa4.31□□□□□ -1.72
AGRN-207ENST00000478677 PP632Q6XCG6 107 aa4.3□□□□□ -1.72
AGRN-207ENST00000478677 MT1LQ93083 61 aa4.29□□□□□ -1.72
AGRN-207ENST00000478677 C10orf95Q9H7T3 257 aa4.29□□□□□ -1.72
AGRN-207ENST00000478677 KRTAP23-1A1A580 65 aa4.23□□□□□ -1.73
AGRN-207ENST00000478677 KRTAP20-2Q3LI61 65 aa4.2□□□□□ -1.74
AGRN-207ENST00000478677 SYNE1Q8NF91 8797 aaKnown RBP4.16□□□□□ -1.74
AGRN-207ENST00000478677 KRTAP12-1P59990 96 aa4.16□□□□□ -1.74
AGRN-207ENST00000478677 A0A0D9SG42 100 aa4.15□□□□□ -1.75
AGRN-207ENST00000478677 KRTAP5-5Q701N2 237 aaPredicted RBP4.15□□□□□ -1.75
AGRN-207ENST00000478677 KRTAP4-7Q9BYR0 210 aa4.14□□□□□ -1.75
AGRN-207ENST00000478677 SPRR5A0A1B0GTR4 108 aa4.13□□□□□ -1.75
AGRN-207ENST00000478677 AHNAKQ09666 5890 aaKnown RBP4.02□□□□□ -1.77
AGRN-207ENST00000478677 MUC5ACP98088 5654 aa4□□□□□ -1.77
AGRN-207ENST00000478677 LCE3AQ5TA76 89 aa4□□□□□ -1.77
AGRN-207ENST00000478677 MUC5BQ9HC84 5762 aaPredicted RBP3.97□□□□□ -1.77
AGRN-207ENST00000478677 LOC100996750A0A140TA64 210 aa3.93□□□□□ -1.78
AGRN-207ENST00000478677 KRTAP4-11Q9BYQ6 195 aa3.9□□□□□ -1.79
AGRN-207ENST00000478677 KRTAP5-2Q701N4 177 aa3.88□□□□□ -1.79
AGRN-207ENST00000478677 KRTAP5-8O75690 187 aa3.86□□□□□ -1.79
AGRN-207ENST00000478677 KRTAP12-4P60329 112 aa3.85□□□□□ -1.79
AGRN-207ENST00000478677 OBSCNQ5VST9 7968 aa3.8□□□□□ -1.8
AGRN-207ENST00000478677 KRTAP12-3P60328 96 aa3.78□□□□□ -1.8
AGRN-207ENST00000478677 TNP1P09430 55 aa3.72□□□□□ -1.81
AGRN-207ENST00000478677 KRTAP6-1Q3LI64 71 aa3.67□□□□□ -1.82
AGRN-207ENST00000478677 MT1AP04731 61 aa3.6□□□□□ -1.83
AGRN-207ENST00000478677 KRTAP5-1Q6L8H4 278 aa3.56□□□□□ -1.84
AGRN-207ENST00000478677 KRTAP6-2Q3LI66 62 aa3.55□□□□□ -1.84
AGRN-207ENST00000478677 KRTAP9-9Q9BYP9 154 aa3.53□□□□□ -1.84
AGRN-207ENST00000478677 KRTAP9-4Q9BYQ2 154 aa3.52□□□□□ -1.85
AGRN-207ENST00000478677 KRTAP9-6A8MVA2 160 aa3.5□□□□□ -1.85
AGRN-207ENST00000478677 LCE3CQ5T5A8 94 aa3.46□□□□□ -1.86
AGRN-207ENST00000478677 KRTAP19-4Q3LI73 84 aa3.42□□□□□ -1.86
AGRN-207ENST00000478677 MT3P25713 68 aa3.22□□□□□ -1.89
AGRN-207ENST00000478677 LCE1EQ5T753 118 aa3.13□□□□□ -1.91
AGRN-207ENST00000478677 KRTAP4-2Q9BYR5 136 aa3.13□□□□□ -1.91
AGRN-207ENST00000478677 LCE1CQ5T751 118 aa2.93□□□□□ -1.94
AGRN-207ENST00000478677 LCE1BQ5T7P3 118 aa2.93□□□□□ -1.94
AGRN-207ENST00000478677 KRTAP4-12Q9BQ66 201 aa2.9□□□□□ -1.95
AGRN-207ENST00000478677 KRTAP5-11Q6L8G4 156 aa2.83□□□□□ -1.96
AGRN-207ENST00000478677 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.67□□□□□ -1.98
AGRN-207ENST00000478677 LCE1FQ5T754 118 aa2.65□□□□□ -1.99
AGRN-207ENST00000478677 PHGR1C9JFL3 82 aa2.6□□□□□ -1.99
AGRN-207ENST00000478677 PRM1P04553 51 aa2.48□□□□□ -2.01
AGRN-207ENST00000478677 KRTAP21-2Q3LI59 83 aa2.48□□□□□ -2.01
AGRN-207ENST00000478677 LCE3EQ5T5B0 92 aa2.48□□□□□ -2.01
AGRN-207ENST00000478677 LCE3DQ9BYE3 92 aa2.4□□□□□ -2.03
AGRN-207ENST00000478677 MUC19Q7Z5P9 8384 aa2.37□□□□□ -2.03
AGRN-207ENST00000478677 KRTAP4-4Q9BYR3 166 aa2.27□□□□□ -2.05
AGRN-207ENST00000478677 KRTAP21-1Q3LI58 79 aa1.94□□□□□ -2.1
AGRN-207ENST00000478677 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 115.1 ms