RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 SYCP2Q9BX26 1530 aa-1.62□□□□□ -2.67
HPS3-205ENST00000478525 SCRIBQ14160 1630 aa-1.62□□□□□ -2.67
HPS3-205ENST00000478525 VCANP13611 3396 aa-1.62□□□□□ -2.67
HPS3-205ENST00000478525 USP34Q70CQ2 3546 aa-1.63□□□□□ -2.67
HPS3-205ENST00000478525 IQGAP3Q86VI3 1631 aa-1.65□□□□□ -2.67
HPS3-205ENST00000478525 UGGT2Q9NYU1 1516 aa-1.66□□□□□ -2.67
HPS3-205ENST00000478525 TTTY10Q9BZA0 68 aa-1.66□□□□□ -2.68
HPS3-205ENST00000478525 CLTCL1P53675 1640 aa-1.66□□□□□ -2.68
HPS3-205ENST00000478525 NRXN3Q9Y4C0 1643 aa-1.67□□□□□ -2.68
HPS3-205ENST00000478525 DDX60Q8IY21 1712 aaKnown RBP-1.68□□□□□ -2.68
HPS3-205ENST00000478525 ABCA5Q8WWZ7 1642 aa-1.68□□□□□ -2.68
HPS3-205ENST00000478525 PLNP26678 52 aa-1.68□□□□□ -2.68
HPS3-205ENST00000478525 SMIM2Q9BVW6 85 aa-1.68□□□□□ -2.68
HPS3-205ENST00000478525 TRPM2O94759 1503 aa-1.68□□□□□ -2.68
HPS3-205ENST00000478525 PDCD5O14737 125 aa-1.69□□□□□ -2.68
HPS3-205ENST00000478525 ABCA10Q8WWZ4 1543 aa-1.71□□□□□ -2.68
HPS3-205ENST00000478525 RHPN1-AS1Q9BWJ2 59 aa-1.71□□□□□ -2.68
HPS3-205ENST00000478525 SMCO4Q9NRQ5 59 aa-1.71□□□□□ -2.68
HPS3-205ENST00000478525 CDH23Q9H251 3354 aa-1.72□□□□□ -2.68
HPS3-205ENST00000478525 KRTAP19-2Q3LHN2 52 aa-1.72□□□□□ -2.68
HPS3-205ENST00000478525 ASPMQ8IZT6 3477 aa-1.73□□□□□ -2.69
HPS3-205ENST00000478525 CD52P31358 61 aa-1.73□□□□□ -2.69
HPS3-205ENST00000478525 DEFB133Q30KQ1 61 aa-1.73□□□□□ -2.69
HPS3-205ENST00000478525 CENPFP49454 3210 aa-1.73□□□□□ -2.69
HPS3-205ENST00000478525 EFCAB5A4FU69 1503 aa-1.74□□□□□ -2.69
HPS3-205ENST00000478525 CPS1P31327 1500 aa-1.75□□□□□ -2.69
HPS3-205ENST00000478525 TFF3Q07654 80 aa-1.75□□□□□ -2.69
HPS3-205ENST00000478525 LINC01590Q5TEZ4 76 aa-1.75□□□□□ -2.69
HPS3-205ENST00000478525 VPS13AQ96RL7 3174 aa-1.75□□□□□ -2.69
HPS3-205ENST00000478525 BRCA2P51587 3418 aa-1.79□□□□□ -2.7
HPS3-205ENST00000478525 A0A087WWC5 75 aa-1.8□□□□□ -2.7
HPS3-205ENST00000478525 PRXQ9BXM0 1461 aa-1.81□□□□□ -2.7
HPS3-205ENST00000478525 SMIM5Q71RC9 77 aa-1.81□□□□□ -2.7
HPS3-205ENST00000478525 ADCY10Q96PN6 1610 aa-1.81□□□□□ -2.7
HPS3-205ENST00000478525 IQGAP1P46940 1657 aa-1.82□□□□□ -2.7
HPS3-205ENST00000478525 NDUFA1O15239 70 aa-1.83□□□□□ -2.7
HPS3-205ENST00000478525 TOMM7Q9P0U1 55 aa-1.83□□□□□ -2.7
HPS3-205ENST00000478525 XIRP2A4UGR9 3374 aa-1.84□□□□□ -2.7
HPS3-205ENST00000478525 HTN1P15515 57 aa-1.84□□□□□ -2.7
HPS3-205ENST00000478525 ABCC8Q09428 1581 aa-1.85□□□□□ -2.7
HPS3-205ENST00000478525 CMC2Q9NRP2 79 aa-1.86□□□□□ -2.71
HPS3-205ENST00000478525 FANCD2Q9BXW9 1451 aa-1.87□□□□□ -2.71
HPS3-205ENST00000478525 NFAT5O94916 1531 aa-1.89□□□□□ -2.71
HPS3-205ENST00000478525 DEFB124Q8NES8 71 aa-1.91□□□□□ -2.72
HPS3-205ENST00000478525 UTRNP46939 3433 aa-1.92□□□□□ -2.72
HPS3-205ENST00000478525 A0A096LNI7 61 aa-1.92□□□□□ -2.72
HPS3-205ENST00000478525 ERICH3Q5RHP9 1530 aa-1.96□□□□□ -2.72
HPS3-205ENST00000478525 DUOX1Q9NRD9 1551 aa-1.97□□□□□ -2.72
HPS3-205ENST00000478525 SAMD9LQ8IVG5 1584 aa-1.98□□□□□ -2.73
HPS3-205ENST00000478525 TOP2AP11388 1531 aaKnown RBP-2.01□□□□□ -2.73
HPS3-205ENST00000478525 GOLGB1Q14789 3259 aaKnown RBP-2.05□□□□□ -2.74
HPS3-205ENST00000478525 MROH2BQ7Z745 1585 aa-2.06□□□□□ -2.74
HPS3-205ENST00000478525 ATP7AQ04656 1500 aa-2.06□□□□□ -2.74
HPS3-205ENST00000478525 H3BUX3 64 aa-2.06□□□□□ -2.74
HPS3-205ENST00000478525 RPL39P62891 51 aaKnown RBP-2.08□□□□□ -2.74
HPS3-205ENST00000478525 DEFB104AQ8WTQ1 72 aa-2.09□□□□□ -2.74
HPS3-205ENST00000478525 LINC01556Q5JQF7 62 aa-2.1□□□□□ -2.75
HPS3-205ENST00000478525 RPL39LQ96EH5 51 aaKnown RBP-2.16□□□□□ -2.76
HPS3-205ENST00000478525 SMIM31A0A1B0GVY4 71 aa-2.17□□□□□ -2.76
HPS3-205ENST00000478525 SNRPGP15A8MWD9 76 aa-2.18□□□□□ -2.76
HPS3-205ENST00000478525 IQGAP2Q13576 1575 aa-2.19□□□□□ -2.76
HPS3-205ENST00000478525 K7EIM0 57 aa-2.28□□□□□ -2.77
HPS3-205ENST00000478525 TOMM5Q8N4H5 51 aa-2.32□□□□□ -2.78
HPS3-205ENST00000478525 APELAP0DMC3 54 aa-2.33□□□□□ -2.78
HPS3-205ENST00000478525 PRCDQ00LT1 54 aa-2.36□□□□□ -2.79
HPS3-205ENST00000478525 A0A096LPF7 62 aa-2.37□□□□□ -2.79
HPS3-205ENST00000478525 ARHGAP5-AS1Q96IT6 56 aa-2.37□□□□□ -2.79
HPS3-205ENST00000478525 HTN3P15516 51 aa-2.41□□□□□ -2.8
HPS3-205ENST00000478525 TMEM167AQ8TBQ9 72 aa-2.41□□□□□ -2.8
HPS3-205ENST00000478525 Q9Y3F1 56 aa-2.41□□□□□ -2.8
HPS3-205ENST00000478525 GCC2Q8IWJ2 1684 aa-2.47□□□□□ -2.81
HPS3-205ENST00000478525 SNRPGP62308 76 aaKnown RBP-2.55□□□□□ -2.82
HPS3-205ENST00000478525 H3BSH0 61 aa-2.56□□□□□ -2.82
HPS3-205ENST00000478525 COX14Q96I36 57 aa-2.65□□□□□ -2.83
HPS3-205ENST00000478525 RPL39P5Q59GN2 51 aa-2.68□□□□□ -2.84
HPS3-205ENST00000478525 DEFB108AA8MXU0 73 aa-2.72□□□□□ -2.84
HPS3-205ENST00000478525 DEFB108BQ8NET1 73 aa-2.81□□□□□ -2.86
HPS3-205ENST00000478525 STATHP02808 62 aa-2.89□□□□□ -2.87
Retrieved 78 of 20,778 RNA–protein pairs in 47.3 ms