RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 NMES1Q9C002 83 aa-3.21□□□□□ -2.92
NCKAP1-204ENST00000477988 C18orf32Q8TCD1 76 aa-3.22□□□□□ -2.92
NCKAP1-204ENST00000477988 HILPDAQ9Y5L2 63 aa-3.26□□□□□ -2.93
NCKAP1-204ENST00000477988 IQGAP3Q86VI3 1631 aa-3.27□□□□□ -2.93
NCKAP1-204ENST00000477988 DUOX2Q9NRD8 1548 aa-3.28□□□□□ -2.93
NCKAP1-204ENST00000477988 IGIPA6NJ69 53 aa-3.28□□□□□ -2.93
NCKAP1-204ENST00000477988 S100A13Q99584 98 aa-3.28□□□□□ -2.93
NCKAP1-204ENST00000477988 HTN1P15515 57 aa-3.29□□□□□ -2.94
NCKAP1-204ENST00000477988 AGLP35573 1532 aa-3.29□□□□□ -2.94
NCKAP1-204ENST00000477988 UGGT1Q9NYU2 1555 aa-3.29□□□□□ -2.94
NCKAP1-204ENST00000477988 RHPN1-AS1Q9BWJ2 59 aa-3.3□□□□□ -2.94
NCKAP1-204ENST00000477988 LINC01549A6NIU2 74 aa-3.31□□□□□ -2.94
NCKAP1-204ENST00000477988 SERF2P84101 59 aa-3.33□□□□□ -2.94
NCKAP1-204ENST00000477988 GNG13Q9P2W3 67 aa-3.33□□□□□ -2.94
NCKAP1-204ENST00000477988 DEFB104AQ8WTQ1 72 aa-3.36□□□□□ -2.95
NCKAP1-204ENST00000477988 CLTCL1P53675 1640 aa-3.38□□□□□ -2.95
NCKAP1-204ENST00000477988 RB1CC1Q8TDY2 1594 aa-3.38□□□□□ -2.95
NCKAP1-204ENST00000477988 H0YGX0 51 aa-3.4□□□□□ -2.95
NCKAP1-204ENST00000477988 DDX60Q8IY21 1712 aaKnown RBP-3.4□□□□□ -2.95
NCKAP1-204ENST00000477988 S100ZQ8WXG8 99 aa-3.4□□□□□ -2.95
NCKAP1-204ENST00000477988 TFF3Q07654 80 aa-3.41□□□□□ -2.96
NCKAP1-204ENST00000477988 SMIM2Q9BVW6 85 aa-3.41□□□□□ -2.96
NCKAP1-204ENST00000477988 GOLGB1Q14789 3259 aaKnown RBP-3.42□□□□□ -2.96
NCKAP1-204ENST00000477988 A0A096LNI7 61 aa-3.42□□□□□ -2.96
NCKAP1-204ENST00000477988 ABCA5Q8WWZ7 1642 aa-3.42□□□□□ -2.96
NCKAP1-204ENST00000477988 UGGT2Q9NYU1 1516 aa-3.43□□□□□ -2.96
NCKAP1-204ENST00000477988 CCDC18Q5T9S5 1454 aa-3.43□□□□□ -2.96
NCKAP1-204ENST00000477988 TRPM2O94759 1503 aa-3.44□□□□□ -2.96
NCKAP1-204ENST00000477988 IQGAP1P46940 1657 aa-3.45□□□□□ -2.96
NCKAP1-204ENST00000477988 NFAT5O94916 1531 aa-3.47□□□□□ -2.96
NCKAP1-204ENST00000477988 ADCY10Q96PN6 1610 aa-3.5□□□□□ -2.97
NCKAP1-204ENST00000477988 PRXQ9BXM0 1461 aa-3.51□□□□□ -2.97
NCKAP1-204ENST00000477988 LINC01590Q5TEZ4 76 aa-3.51□□□□□ -2.97
NCKAP1-204ENST00000477988 DEFB124Q8NES8 71 aa-3.51□□□□□ -2.97
NCKAP1-204ENST00000477988 CPS1P31327 1500 aa-3.54□□□□□ -2.98
NCKAP1-204ENST00000477988 ABCA10Q8WWZ4 1543 aa-3.54□□□□□ -2.98
NCKAP1-204ENST00000477988 PLNP26678 52 aa-3.55□□□□□ -2.98
NCKAP1-204ENST00000477988 LINC01556Q5JQF7 62 aa-3.55□□□□□ -2.98
NCKAP1-204ENST00000477988 GNG2P59768 71 aa-3.59□□□□□ -2.98
NCKAP1-204ENST00000477988 TOMM7Q9P0U1 55 aa-3.6□□□□□ -2.99
NCKAP1-204ENST00000477988 EFCAB5A4FU69 1503 aa-3.6□□□□□ -2.99
NCKAP1-204ENST00000477988 PDCD5O14737 125 aa-3.68□□□□□ -3
NCKAP1-204ENST00000477988 NDUFA1O15239 70 aa-3.69□□□□□ -3
NCKAP1-204ENST00000477988 FANCD2Q9BXW9 1451 aa-3.7□□□□□ -3
NCKAP1-204ENST00000477988 ABCC8Q09428 1581 aa-3.72□□□□□ -3
NCKAP1-204ENST00000477988 DUOX1Q9NRD9 1551 aa-3.72□□□□□ -3
NCKAP1-204ENST00000477988 SMCO4Q9NRQ5 59 aa-3.72□□□□□ -3
NCKAP1-204ENST00000477988 ERICH3Q5RHP9 1530 aa-3.75□□□□□ -3.01
NCKAP1-204ENST00000477988 A0A087WWC5 75 aa-3.82□□□□□ -3.02
NCKAP1-204ENST00000477988 TOP2AP11388 1531 aaKnown RBP-3.83□□□□□ -3.02
NCKAP1-204ENST00000477988 SAMD9LQ8IVG5 1584 aa-3.88□□□□□ -3.03
NCKAP1-204ENST00000477988 CMC2Q9NRP2 79 aa-3.88□□□□□ -3.03
NCKAP1-204ENST00000477988 H3BUX3 64 aa-3.92□□□□□ -3.04
NCKAP1-204ENST00000477988 APELAP0DMC3 54 aa-3.92□□□□□ -3.04
NCKAP1-204ENST00000477988 SMIM5Q71RC9 77 aa-3.94□□□□□ -3.04
NCKAP1-204ENST00000477988 ATP7AQ04656 1500 aa-3.95□□□□□ -3.04
NCKAP1-204ENST00000477988 RPL39P62891 51 aaKnown RBP-3.98□□□□□ -3.05
NCKAP1-204ENST00000477988 MROH2BQ7Z745 1585 aa-3.99□□□□□ -3.05
NCKAP1-204ENST00000477988 A0A096LPF7 62 aa-4□□□□□ -3.05
NCKAP1-204ENST00000477988 HTN3P15516 51 aa-4.02□□□□□ -3.05
NCKAP1-204ENST00000477988 RPL39LQ96EH5 51 aaKnown RBP-4.1□□□□□ -3.07
NCKAP1-204ENST00000477988 H3BSH0 61 aa-4.24□□□□□ -3.09
NCKAP1-204ENST00000477988 PRCDQ00LT1 54 aa-4.27□□□□□ -3.09
NCKAP1-204ENST00000477988 TMEM167AQ8TBQ9 72 aa-4.31□□□□□ -3.1
NCKAP1-204ENST00000477988 IQGAP2Q13576 1575 aa-4.32□□□□□ -3.1
NCKAP1-204ENST00000477988 K7EIM0 57 aa-4.34□□□□□ -3.1
NCKAP1-204ENST00000477988 Q9Y3F1 56 aa-4.35□□□□□ -3.11
NCKAP1-204ENST00000477988 ARHGAP5-AS1Q96IT6 56 aa-4.44□□□□□ -3.12
NCKAP1-204ENST00000477988 SNRPGP15A8MWD9 76 aa-4.46□□□□□ -3.12
NCKAP1-204ENST00000477988 COX14Q96I36 57 aa-4.51□□□□□ -3.13
NCKAP1-204ENST00000477988 SMIM31A0A1B0GVY4 71 aa-4.54□□□□□ -3.14
NCKAP1-204ENST00000477988 TOMM5Q8N4H5 51 aa-4.66□□□□□ -3.16
NCKAP1-204ENST00000477988 DEFB108BQ8NET1 73 aa-4.7□□□□□ -3.16
NCKAP1-204ENST00000477988 RPL39P5Q59GN2 51 aa-4.75□□□□□ -3.17
NCKAP1-204ENST00000477988 DEFB108AA8MXU0 73 aa-4.78□□□□□ -3.17
NCKAP1-204ENST00000477988 STATHP02808 62 aa-4.79□□□□□ -3.18
NCKAP1-204ENST00000477988 SNRPGP62308 76 aaKnown RBP-4.79□□□□□ -3.18
NCKAP1-204ENST00000477988 GCC2Q8IWJ2 1684 aa-4.8□□□□□ -3.18
Retrieved 78 of 20,778 RNA–protein pairs in 156.5 ms