RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 KRTAP19-3Q7Z4W3 81 aa4.4□□□□□ -1.71
CPSF7-211ENST00000477890 DSTQ03001 7570 aaKnown RBP4.39□□□□□ -1.71
CPSF7-211ENST00000477890 MT1EP04732 61 aa4.39□□□□□ -1.71
CPSF7-211ENST00000477890 KRTAP13-4Q3LI77 160 aa4.38□□□□□ -1.71
CPSF7-211ENST00000477890 GPR98Q8WXG9 6306 aa4.35□□□□□ -1.71
CPSF7-211ENST00000477890 LCE1DQ5T752 114 aa4.31□□□□□ -1.72
CPSF7-211ENST00000477890 K7ERS5 55 aa4.28□□□□□ -1.72
CPSF7-211ENST00000477890 A0A0D9SG42 100 aa4.27□□□□□ -1.73
CPSF7-211ENST00000477890 H3BS24 57 aa4.27□□□□□ -1.73
CPSF7-211ENST00000477890 KRTAP25-1Q3LHN0 102 aa4.27□□□□□ -1.73
CPSF7-211ENST00000477890 A0A1B0GU33 70 aa4.26□□□□□ -1.73
CPSF7-211ENST00000477890 MT1GP13640 62 aa4.26□□□□□ -1.73
CPSF7-211ENST00000477890 KRTAP19-5Q3LI72 72 aa4.26□□□□□ -1.73
CPSF7-211ENST00000477890 MT4P47944 62 aa4.24□□□□□ -1.73
CPSF7-211ENST00000477890 LCE4AQ5TA78 99 aa4.24□□□□□ -1.73
CPSF7-211ENST00000477890 PP632Q6XCG6 107 aa4.24□□□□□ -1.73
CPSF7-211ENST00000477890 SPINT4Q6UDR6 99 aa4.2□□□□□ -1.74
CPSF7-211ENST00000477890 MT1MQ8N339 61 aa4.2□□□□□ -1.74
CPSF7-211ENST00000477890 ROMO1P60602 79 aa4.18□□□□□ -1.74
CPSF7-211ENST00000477890 MT1LQ93083 61 aa4.16□□□□□ -1.74
CPSF7-211ENST00000477890 HMCN1Q96RW7 5635 aa4.16□□□□□ -1.74
CPSF7-211ENST00000477890 KRTAP12-1P59990 96 aa4.13□□□□□ -1.75
CPSF7-211ENST00000477890 KRTAP4-3Q9BYR4 195 aa4.12□□□□□ -1.75
CPSF7-211ENST00000477890 KRTAP5-4Q6L8H1 288 aa4.11□□□□□ -1.75
CPSF7-211ENST00000477890 KRTAP5-10Q6L8G5 202 aa4.1□□□□□ -1.75
CPSF7-211ENST00000477890 C10orf95Q9H7T3 257 aa4.07□□□□□ -1.76
CPSF7-211ENST00000477890 LCE3AQ5TA76 89 aa4.06□□□□□ -1.76
CPSF7-211ENST00000477890 AHNAK2Q8IVF2 5795 aa4.05□□□□□ -1.76
CPSF7-211ENST00000477890 TNP1P09430 55 aa4□□□□□ -1.77
CPSF7-211ENST00000477890 KRTAP5-7Q6L8G8 165 aa3.97□□□□□ -1.77
CPSF7-211ENST00000477890 KRTAP5-3Q6L8H2 238 aa3.96□□□□□ -1.78
CPSF7-211ENST00000477890 KRTAP4-7Q9BYR0 210 aa3.96□□□□□ -1.78
CPSF7-211ENST00000477890 KRTAP20-2Q3LI61 65 aa3.91□□□□□ -1.78
CPSF7-211ENST00000477890 KRTAP12-3P60328 96 aa3.9□□□□□ -1.79
CPSF7-211ENST00000477890 KRTAP15-1Q3LI76 137 aa3.9□□□□□ -1.79
CPSF7-211ENST00000477890 KRTAP4-12Q9BQ66 201 aa3.87□□□□□ -1.79
CPSF7-211ENST00000477890 KRTAP5-5Q701N2 237 aaPredicted RBP3.86□□□□□ -1.79
CPSF7-211ENST00000477890 SPRR5A0A1B0GTR4 108 aa3.85□□□□□ -1.79
CPSF7-211ENST00000477890 NDUFAF8A1L188 74 aa3.85□□□□□ -1.79
CPSF7-211ENST00000477890 KRTAP12-4P60329 112 aa3.82□□□□□ -1.8
CPSF7-211ENST00000477890 KRTAP9-9Q9BYP9 154 aa3.8□□□□□ -1.8
CPSF7-211ENST00000477890 KRTAP9-4Q9BYQ2 154 aa3.8□□□□□ -1.8
CPSF7-211ENST00000477890 SYNE1Q8NF91 8797 aaKnown RBP3.69□□□□□ -1.82
CPSF7-211ENST00000477890 KRTAP19-4Q3LI73 84 aa3.63□□□□□ -1.83
CPSF7-211ENST00000477890 LUZP6Q538Z0 58 aa3.62□□□□□ -1.83
CPSF7-211ENST00000477890 KRTAP4-11Q9BYQ6 195 aa3.62□□□□□ -1.83
CPSF7-211ENST00000477890 A0A0A0MQY5 61 aa3.59□□□□□ -1.83
CPSF7-211ENST00000477890 LCE3CQ5T5A8 94 aa3.56□□□□□ -1.84
CPSF7-211ENST00000477890 KRTAP5-2Q701N4 177 aa3.56□□□□□ -1.84
CPSF7-211ENST00000477890 KRTAP6-1Q3LI64 71 aa3.54□□□□□ -1.84
CPSF7-211ENST00000477890 MT1AP04731 61 aa3.53□□□□□ -1.84
CPSF7-211ENST00000477890 KRTAP23-1A1A580 65 aa3.52□□□□□ -1.85
CPSF7-211ENST00000477890 KRTAP5-8O75690 187 aa3.5□□□□□ -1.85
CPSF7-211ENST00000477890 KRTAP4-2Q9BYR5 136 aa3.47□□□□□ -1.85
CPSF7-211ENST00000477890 KRTAP6-2Q3LI66 62 aa3.42□□□□□ -1.86
CPSF7-211ENST00000477890 MUC5ACP98088 5654 aa3.37□□□□□ -1.87
CPSF7-211ENST00000477890 KRTAP9-6A8MVA2 160 aa3.37□□□□□ -1.87
CPSF7-211ENST00000477890 MUC5BQ9HC84 5762 aaPredicted RBP3.37□□□□□ -1.87
CPSF7-211ENST00000477890 OBSCNQ5VST9 7968 aa3.33□□□□□ -1.88
CPSF7-211ENST00000477890 AHNAKQ09666 5890 aaKnown RBP3.32□□□□□ -1.88
CPSF7-211ENST00000477890 INE1O15225 51 aa3.24□□□□□ -1.89
CPSF7-211ENST00000477890 MT3P25713 68 aa3.24□□□□□ -1.89
CPSF7-211ENST00000477890 KRTAP5-1Q6L8H4 278 aa3.24□□□□□ -1.89
CPSF7-211ENST00000477890 LCE1EQ5T753 118 aa3.01□□□□□ -1.93
CPSF7-211ENST00000477890 LCE1BQ5T7P3 118 aa2.89□□□□□ -1.95
CPSF7-211ENST00000477890 LCE1CQ5T751 118 aa2.8□□□□□ -1.96
CPSF7-211ENST00000477890 KRTAP5-11Q6L8G4 156 aa2.56□□□□□ -2
CPSF7-211ENST00000477890 LCE1FQ5T754 118 aa2.53□□□□□ -2
CPSF7-211ENST00000477890 LCE3DQ9BYE3 92 aa2.53□□□□□ -2
CPSF7-211ENST00000477890 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.52□□□□□ -2.01
CPSF7-211ENST00000477890 PHGR1C9JFL3 82 aa2.41□□□□□ -2.02
CPSF7-211ENST00000477890 LCE3EQ5T5B0 92 aa2.34□□□□□ -2.03
CPSF7-211ENST00000477890 KRTAP21-2Q3LI59 83 aa2.33□□□□□ -2.04
CPSF7-211ENST00000477890 KRTAP4-4Q9BYR3 166 aa2.19□□□□□ -2.06
CPSF7-211ENST00000477890 PRM1P04553 51 aa2.18□□□□□ -2.06
CPSF7-211ENST00000477890 MUC19Q7Z5P9 8384 aa2.07□□□□□ -2.08
CPSF7-211ENST00000477890 KRTAP21-1Q3LI58 79 aa1.82□□□□□ -2.12
CPSF7-211ENST00000477890 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 5.8 ms