RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 CAMK2N1Q7Z7J9 78 aa3.9□□□□□ -1.79
SMARCB1-206ENST00000477836 MT4P47944 62 aa3.89□□□□□ -1.79
SMARCB1-206ENST00000477836 KRTAP5-7Q6L8G8 165 aa3.89□□□□□ -1.79
SMARCB1-206ENST00000477836 KRTAP10-7P60409 375 aaPredicted RBP3.85□□□□□ -1.79
SMARCB1-206ENST00000477836 SPRR5A0A1B0GTR4 108 aa3.84□□□□□ -1.79
SMARCB1-206ENST00000477836 PRO0628Q9UI54 55 aa3.84□□□□□ -1.79
SMARCB1-206ENST00000477836 KRTAP10-12P60413 245 aa3.81□□□□□ -1.8
SMARCB1-206ENST00000477836 LCE4AQ5TA78 99 aa3.8□□□□□ -1.8
SMARCB1-206ENST00000477836 LCE5AQ5TCM9 118 aa3.77□□□□□ -1.81
SMARCB1-206ENST00000477836 PMAIP1Q13794 54 aa3.75□□□□□ -1.81
SMARCB1-206ENST00000477836 KRTAP5-3Q6L8H2 238 aa3.75□□□□□ -1.81
SMARCB1-206ENST00000477836 ROMO1P60602 79 aa3.74□□□□□ -1.81
SMARCB1-206ENST00000477836 C10orf95Q9H7T3 257 aa3.72□□□□□ -1.81
SMARCB1-206ENST00000477836 KRTAP4-6Q9BYQ5 205 aa3.7□□□□□ -1.82
SMARCB1-206ENST00000477836 KRTAP19-3Q7Z4W3 81 aa3.69□□□□□ -1.82
SMARCB1-206ENST00000477836 TNP1P09430 55 aa3.67□□□□□ -1.82
SMARCB1-206ENST00000477836 KRTAP25-1Q3LHN0 102 aa3.65□□□□□ -1.83
SMARCB1-206ENST00000477836 KRTAP5-4Q6L8H1 288 aa3.62□□□□□ -1.83
SMARCB1-206ENST00000477836 MT1EP04732 61 aa3.61□□□□□ -1.83
SMARCB1-206ENST00000477836 KRTAP19-7Q3SYF9 63 aa3.61□□□□□ -1.83
SMARCB1-206ENST00000477836 KTN1-AS1Q86SY8 53 aa3.59□□□□□ -1.83
SMARCB1-206ENST00000477836 AHNAKQ09666 5890 aaKnown RBP3.55□□□□□ -1.84
SMARCB1-206ENST00000477836 MT1GP13640 62 aa3.53□□□□□ -1.84
SMARCB1-206ENST00000477836 LCE3AQ5TA76 89 aa3.52□□□□□ -1.85
SMARCB1-206ENST00000477836 PP632Q6XCG6 107 aa3.52□□□□□ -1.85
SMARCB1-206ENST00000477836 PRAC1Q96KF2 57 aa3.52□□□□□ -1.85
SMARCB1-206ENST00000477836 KRTAP23-1A1A580 65 aa3.5□□□□□ -1.85
SMARCB1-206ENST00000477836 KRTAP20-2Q3LI61 65 aa3.48□□□□□ -1.85
SMARCB1-206ENST00000477836 MT1MQ8N339 61 aa3.48□□□□□ -1.85
SMARCB1-206ENST00000477836 MUC5ACP98088 5654 aa3.46□□□□□ -1.86
SMARCB1-206ENST00000477836 SVIPQ8NHG7 77 aa3.45□□□□□ -1.86
SMARCB1-206ENST00000477836 MUC5BQ9HC84 5762 aaPredicted RBP3.45□□□□□ -1.86
SMARCB1-206ENST00000477836 KRTAP4-3Q9BYR4 195 aa3.44□□□□□ -1.86
SMARCB1-206ENST00000477836 KRTAP12-3P60328 96 aa3.39□□□□□ -1.87
SMARCB1-206ENST00000477836 KRTAP19-5Q3LI72 72 aa3.39□□□□□ -1.87
SMARCB1-206ENST00000477836 MT1LQ93083 61 aa3.35□□□□□ -1.87
SMARCB1-206ENST00000477836 KRTAP4-11Q9BYQ6 195 aa3.31□□□□□ -1.88
SMARCB1-206ENST00000477836 KRTAP4-7Q9BYR0 210 aa3.31□□□□□ -1.88
SMARCB1-206ENST00000477836 KRTAP12-4P60329 112 aa3.3□□□□□ -1.88
SMARCB1-206ENST00000477836 SYNE1Q8NF91 8797 aaKnown RBP3.3□□□□□ -1.88
SMARCB1-206ENST00000477836 KRTAP15-1Q3LI76 137 aa3.28□□□□□ -1.88
SMARCB1-206ENST00000477836 KRTAP5-8O75690 187 aa3.26□□□□□ -1.89
SMARCB1-206ENST00000477836 KRTAP5-5Q701N2 237 aaPredicted RBP3.23□□□□□ -1.89
SMARCB1-206ENST00000477836 KRTAP19-4Q3LI73 84 aa3.17□□□□□ -1.9
SMARCB1-206ENST00000477836 OBSCNQ5VST9 7968 aa3.17□□□□□ -1.9
SMARCB1-206ENST00000477836 KRTAP9-9Q9BYP9 154 aa3.15□□□□□ -1.91
SMARCB1-206ENST00000477836 LCE3CQ5T5A8 94 aa3.14□□□□□ -1.91
SMARCB1-206ENST00000477836 KRTAP5-2Q701N4 177 aa3.07□□□□□ -1.92
SMARCB1-206ENST00000477836 LOC100996750A0A140TA64 210 aa3.06□□□□□ -1.92
SMARCB1-206ENST00000477836 KRTAP9-6A8MVA2 160 aa2.94□□□□□ -1.94
SMARCB1-206ENST00000477836 H3BS24 57 aa2.94□□□□□ -1.94
SMARCB1-206ENST00000477836 LUZP6Q538Z0 58 aa2.93□□□□□ -1.94
SMARCB1-206ENST00000477836 KRTAP6-1Q3LI64 71 aa2.87□□□□□ -1.95
SMARCB1-206ENST00000477836 KRTAP5-1Q6L8H4 278 aa2.87□□□□□ -1.95
SMARCB1-206ENST00000477836 KRTAP6-2Q3LI66 62 aa2.86□□□□□ -1.95
SMARCB1-206ENST00000477836 KRTAP9-4Q9BYQ2 154 aa2.86□□□□□ -1.95
SMARCB1-206ENST00000477836 MT1AP04731 61 aa2.83□□□□□ -1.96
SMARCB1-206ENST00000477836 NDUFAF8A1L188 74 aa2.75□□□□□ -1.97
SMARCB1-206ENST00000477836 A0A0A0MQY5 61 aa2.62□□□□□ -1.99
SMARCB1-206ENST00000477836 MT3P25713 68 aa2.62□□□□□ -1.99
SMARCB1-206ENST00000477836 LCE1EQ5T753 118 aa2.52□□□□□ -2.01
SMARCB1-206ENST00000477836 LCE1BQ5T7P3 118 aa2.48□□□□□ -2.01
SMARCB1-206ENST00000477836 KRTAP4-12Q9BQ66 201 aa2.47□□□□□ -2.01
SMARCB1-206ENST00000477836 KRTAP4-2Q9BYR5 136 aa2.47□□□□□ -2.01
SMARCB1-206ENST00000477836 PHGR1C9JFL3 82 aa2.36□□□□□ -2.03
SMARCB1-206ENST00000477836 LCE1CQ5T751 118 aa2.35□□□□□ -2.03
SMARCB1-206ENST00000477836 LCE3DQ9BYE3 92 aa2.34□□□□□ -2.03
SMARCB1-206ENST00000477836 KRTAP5-11Q6L8G4 156 aa2.31□□□□□ -2.04
SMARCB1-206ENST00000477836 INE1O15225 51 aa2.28□□□□□ -2.04
SMARCB1-206ENST00000477836 LCE3EQ5T5B0 92 aa2.27□□□□□ -2.05
SMARCB1-206ENST00000477836 LCE1FQ5T754 118 aa2.24□□□□□ -2.05
SMARCB1-206ENST00000477836 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.06□□□□□ -2.08
SMARCB1-206ENST00000477836 MUC19Q7Z5P9 8384 aa1.96□□□□□ -2.1
SMARCB1-206ENST00000477836 PRM1P04553 51 aa1.94□□□□□ -2.1
SMARCB1-206ENST00000477836 KRTAP21-2Q3LI59 83 aa1.89□□□□□ -2.11
SMARCB1-206ENST00000477836 KRTAP4-4Q9BYR3 166 aa1.85□□□□□ -2.11
SMARCB1-206ENST00000477836 KRTAP21-1Q3LI58 79 aa1.78□□□□□ -2.12
SMARCB1-206ENST00000477836 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 57.8 ms