RNA–Protein interactions for RNA: ENST00000477819.1

PTPRN-214, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 579 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-214ENST00000477819 ETDBQ3ZM63 59 aa2.74□□□□□ -1.97
PTPRN-214ENST00000477819 C14orf132Q9NPU4 83 aa2.74□□□□□ -1.97
PTPRN-214ENST00000477819 PRO0461Q9UI25 63 aa2.74□□□□□ -1.97
PTPRN-214ENST00000477819 NDUFC1O43677 76 aa2.73□□□□□ -1.97
PTPRN-214ENST00000477819 P0C880 135 aa2.72□□□□□ -1.97
PTPRN-214ENST00000477819 MT1GP13640 62 aa2.72□□□□□ -1.97
PTPRN-214ENST00000477819 KRTAP5-5Q701N2 237 aaPredicted RBP2.72□□□□□ -1.97
PTPRN-214ENST00000477819 MUC5ACP98088 5654 aa2.72□□□□□ -1.97
PTPRN-214ENST00000477819 MUC5BQ9HC84 5762 aaPredicted RBP2.71□□□□□ -1.98
PTPRN-214ENST00000477819 H3BPC8 53 aa2.71□□□□□ -1.98
PTPRN-214ENST00000477819 CCDC179H3BU77 68 aa2.71□□□□□ -1.98
PTPRN-214ENST00000477819 MT-ATP8P03928 68 aa2.71□□□□□ -1.98
PTPRN-214ENST00000477819 KRTAP20-2Q3LI61 65 aa2.7□□□□□ -1.98
PTPRN-214ENST00000477819 MT1MQ8N339 61 aa2.7□□□□□ -1.98
PTPRN-214ENST00000477819 JMJD7-PLA2G4BH0Y9G9 81 aa2.69□□□□□ -1.98
PTPRN-214ENST00000477819 TMEM258P61165 79 aa2.69□□□□□ -1.98
PTPRN-214ENST00000477819 TRAV7A0A075B6U4 112 aa2.68□□□□□ -1.98
PTPRN-214ENST00000477819 PP632Q6XCG6 107 aa2.67□□□□□ -1.98
PTPRN-214ENST00000477819 ATXN8Q156A1 80 aa2.66□□□□□ -1.98
PTPRN-214ENST00000477819 CYP4F30PQ9H0H9 118 aa2.66□□□□□ -1.98
PTPRN-214ENST00000477819 ACYP1P07311 99 aa2.65□□□□□ -1.99
PTPRN-214ENST00000477819 KRTAP19-5Q3LI72 72 aa2.63□□□□□ -1.99
PTPRN-214ENST00000477819 A0A1B0GU33 70 aa2.62□□□□□ -1.99
PTPRN-214ENST00000477819 SERP1Q9Y6X1 66 aa2.62□□□□□ -1.99
PTPRN-214ENST00000477819 KRTAP25-1Q3LHN0 102 aa2.61□□□□□ -1.99
PTPRN-214ENST00000477819 SPINT4Q6UDR6 99 aa2.61□□□□□ -1.99
PTPRN-214ENST00000477819 C20orf197Q8N268 126 aa2.61□□□□□ -1.99
PTPRN-214ENST00000477819 ATOX1O00244 68 aa2.6□□□□□ -1.99
PTPRN-214ENST00000477819 COX7CP15954 63 aa2.6□□□□□ -1.99
PTPRN-214ENST00000477819 LINC00643Q86TS7 51 aa2.6□□□□□ -1.99
PTPRN-214ENST00000477819 MT1LQ93083 61 aa2.6□□□□□ -1.99
PTPRN-214ENST00000477819 ROMO1P60602 79 aa2.57□□□□□ -2
PTPRN-214ENST00000477819 TP53AIP1Q9HCN2 124 aa2.57□□□□□ -2
PTPRN-214ENST00000477819 LCE1CQ5T751 118 aa2.56□□□□□ -2
PTPRN-214ENST00000477819 LCE1BQ5T7P3 118 aa2.56□□□□□ -2
PTPRN-214ENST00000477819 KRTAP5-8O75690 187 aa2.55□□□□□ -2
PTPRN-214ENST00000477819 SERP2Q8N6R1 65 aa2.55□□□□□ -2
PTPRN-214ENST00000477819 SYNE1Q8NF91 8797 aaKnown RBP2.55□□□□□ -2
PTPRN-214ENST00000477819 TRAV22A0A0B4J277 110 aa2.54□□□□□ -2
PTPRN-214ENST00000477819 LOC101927531A0A1B0GV80 90 aa2.54□□□□□ -2
PTPRN-214ENST00000477819 ATP5EP2Q5VTU8 51 aa2.54□□□□□ -2
PTPRN-214ENST00000477819 KRTAP12-4P60329 112 aa2.53□□□□□ -2
PTPRN-214ENST00000477819 A0A0D9SG42 100 aa2.51□□□□□ -2.01
PTPRN-214ENST00000477819 ATP5EP56381 51 aaPredicted RBP2.51□□□□□ -2.01
PTPRN-214ENST00000477819 MIR22HGQ0VDD5 57 aa2.49□□□□□ -2.01
PTPRN-214ENST00000477819 UBL5Q9BZL1 73 aa2.47□□□□□ -2.01
PTPRN-214ENST00000477819 H7BZZ5 65 aa2.44□□□□□ -2.02
PTPRN-214ENST00000477819 SPTSSBQ8NFR3 76 aa2.43□□□□□ -2.02
PTPRN-214ENST00000477819 H0Y9P7 68 aa2.42□□□□□ -2.02
PTPRN-214ENST00000477819 Q1T7F1 81 aa2.41□□□□□ -2.02
PTPRN-214ENST00000477819 LCE3DQ9BYE3 92 aa2.39□□□□□ -2.03
PTPRN-214ENST00000477819 C10orf95Q9H7T3 257 aa2.39□□□□□ -2.03
PTPRN-214ENST00000477819 SNURFQ9Y675 71 aa2.38□□□□□ -2.03
PTPRN-214ENST00000477819 KRTAP13-4Q3LI77 160 aa2.37□□□□□ -2.03
PTPRN-214ENST00000477819 LINC00208Q96KT6 92 aa2.35□□□□□ -2.03
PTPRN-214ENST00000477819 CDC42SE1Q9NRR8 79 aa2.34□□□□□ -2.03
PTPRN-214ENST00000477819 DMAC1Q96GE9 116 aa2.32□□□□□ -2.04
PTPRN-214ENST00000477819 CHKB-CPT1BH3BT56 60 aa2.26□□□□□ -2.05
PTPRN-214ENST00000477819 PRR15LQ9BU68 103 aa2.25□□□□□ -2.05
PTPRN-214ENST00000477819 KRTAP6-1Q3LI64 71 aa2.24□□□□□ -2.05
PTPRN-214ENST00000477819 KRTAP12-3P60328 96 aa2.23□□□□□ -2.05
PTPRN-214ENST00000477819 KRTAP6-2Q3LI66 62 aa2.23□□□□□ -2.05
PTPRN-214ENST00000477819 COA5Q86WW8 74 aa2.23□□□□□ -2.05
PTPRN-214ENST00000477819 LINC01558Q9Y6Z2 57 aa2.22□□□□□ -2.05
PTPRN-214ENST00000477819 MT1AP04731 61 aa2.18□□□□□ -2.06
PTPRN-214ENST00000477819 INE1O15225 51 aa2.16□□□□□ -2.06
PTPRN-214ENST00000477819 ACYP2P14621 99 aa2.16□□□□□ -2.06
PTPRN-214ENST00000477819 KRTAP12-1P59990 96 aa2.16□□□□□ -2.06
PTPRN-214ENST00000477819 SPATA8Q6RVD6 105 aa2.15□□□□□ -2.07
PTPRN-214ENST00000477819 TNP1P09430 55 aa2.14□□□□□ -2.07
PTPRN-214ENST00000477819 MUC19Q7Z5P9 8384 aa2.11□□□□□ -2.07
PTPRN-214ENST00000477819 A0A1B0GU69 56 aa2.1□□□□□ -2.07
PTPRN-214ENST00000477819 UQCR11O14957 56 aa2.09□□□□□ -2.07
PTPRN-214ENST00000477819 KRTAP21-2Q3LI59 83 aa1.85□□□□□ -2.11
PTPRN-214ENST00000477819 PHGR1C9JFL3 82 aa1.83□□□□□ -2.12
PTPRN-214ENST00000477819 KRTAP21-1Q3LI58 79 aa1.37□□□□□ -2.19
PTPRN-214ENST00000477819 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
PTPRN-214ENST00000477819 PRM1P04553 51 aa0.99□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 61.1 ms