RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 IGKV3D-7A0A0C4DH55 119 aa2.01□□□□□ -2.09
CKS1B-207ENST00000477676 A0A1B0GU33 70 aa2.01□□□□□ -2.09
CKS1B-207ENST00000477676 NDUFB1O75438 58 aa2□□□□□ -2.09
CKS1B-207ENST00000477676 ORMDL1Q9P0S3 153 aa2□□□□□ -2.09
CKS1B-207ENST00000477676 MMP24-AS1A0A0U1RRL7 71 aa1.98□□□□□ -2.09
CKS1B-207ENST00000477676 SPRR2EP22531 72 aa1.98□□□□□ -2.09
CKS1B-207ENST00000477676 SPRR2BP35325 72 aa1.98□□□□□ -2.09
CKS1B-207ENST00000477676 SPRR2AP35326 72 aa1.98□□□□□ -2.09
CKS1B-207ENST00000477676 SPRR2FQ96RM1 72 aa1.98□□□□□ -2.09
CKS1B-207ENST00000477676 DNAL4O96015 105 aa1.97□□□□□ -2.09
CKS1B-207ENST00000477676 KRTAP2-1Q9BYU5 128 aa1.97□□□□□ -2.09
CKS1B-207ENST00000477676 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
CKS1B-207ENST00000477676 MRPL34Q9BQ48 92 aaKnown RBP1.96□□□□□ -2.1
CKS1B-207ENST00000477676 GPR98Q8WXG9 6306 aa1.93□□□□□ -2.1
CKS1B-207ENST00000477676 K7EQZ3 153 aa1.93□□□□□ -2.1
CKS1B-207ENST00000477676 UQCR11O14957 56 aa1.93□□□□□ -2.1
CKS1B-207ENST00000477676 MT1XP80297 61 aa1.93□□□□□ -2.1
CKS1B-207ENST00000477676 PRR15LQ9BU68 103 aa1.93□□□□□ -2.1
CKS1B-207ENST00000477676 LOC110117498A0A087WWA1 95 aa1.92□□□□□ -2.1
CKS1B-207ENST00000477676 CSAG1Q6PB30 78 aa1.92□□□□□ -2.1
CKS1B-207ENST00000477676 UBL5Q9BZL1 73 aa1.92□□□□□ -2.1
CKS1B-207ENST00000477676 S4R3F8 94 aa1.92□□□□□ -2.1
CKS1B-207ENST00000477676 A0A087WVE0 104 aa1.91□□□□□ -2.1
CKS1B-207ENST00000477676 P0C880 135 aa1.91□□□□□ -2.1
CKS1B-207ENST00000477676 PDE6GP18545 87 aa1.91□□□□□ -2.1
CKS1B-207ENST00000477676 SPRR2DP22532 72 aa1.91□□□□□ -2.1
CKS1B-207ENST00000477676 KRTAP25-1Q3LHN0 102 aa1.91□□□□□ -2.1
CKS1B-207ENST00000477676 LINC01558Q9Y6Z2 57 aa1.91□□□□□ -2.1
CKS1B-207ENST00000477676 KRTAP8-1Q8IUC2 63 aa1.9□□□□□ -2.11
CKS1B-207ENST00000477676 PRO2289Q9P1D8 64 aa1.9□□□□□ -2.11
CKS1B-207ENST00000477676 SNURFQ9Y675 71 aa1.9□□□□□ -2.11
CKS1B-207ENST00000477676 JMJD7-PLA2G4BH0Y9G9 81 aa1.89□□□□□ -2.11
CKS1B-207ENST00000477676 NREPQ16612 68 aa1.89□□□□□ -2.11
CKS1B-207ENST00000477676 LINC00208Q96KT6 92 aa1.89□□□□□ -2.11
CKS1B-207ENST00000477676 H0Y9P7 68 aa1.88□□□□□ -2.11
CKS1B-207ENST00000477676 DSTQ03001 7570 aaKnown RBP1.86□□□□□ -2.11
CKS1B-207ENST00000477676 CRIPTQ9P021 101 aa1.86□□□□□ -2.11
CKS1B-207ENST00000477676 R4GN34 69 aa1.86□□□□□ -2.11
CKS1B-207ENST00000477676 SPATA8Q6RVD6 105 aa1.84□□□□□ -2.11
CKS1B-207ENST00000477676 AHNAK2Q8IVF2 5795 aa1.82□□□□□ -2.12
CKS1B-207ENST00000477676 H0YAA0 97 aa1.81□□□□□ -2.12
CKS1B-207ENST00000477676 HMCN1Q96RW7 5635 aa1.8□□□□□ -2.12
CKS1B-207ENST00000477676 INE1O15225 51 aa1.79□□□□□ -2.12
CKS1B-207ENST00000477676 PLAC4Q8WY50 150 aa1.78□□□□□ -2.12
CKS1B-207ENST00000477676 A0A1B0GU69 56 aa1.76□□□□□ -2.13
CKS1B-207ENST00000477676 ACYP2P14621 99 aa1.76□□□□□ -2.13
CKS1B-207ENST00000477676 COA5Q86WW8 74 aa1.76□□□□□ -2.13
CKS1B-207ENST00000477676 SPRR5A0A1B0GTR4 108 aa1.75□□□□□ -2.13
CKS1B-207ENST00000477676 TP53AIP1Q9HCN2 124 aa1.75□□□□□ -2.13
CKS1B-207ENST00000477676 KRTAP19-7Q3SYF9 63 aa1.74□□□□□ -2.13
CKS1B-207ENST00000477676 M0QZ58 72 aa1.73□□□□□ -2.13
CKS1B-207ENST00000477676 KRTAP5-10Q6L8G5 202 aa1.72□□□□□ -2.13
CKS1B-207ENST00000477676 MT1EP04732 61 aa1.71□□□□□ -2.14
CKS1B-207ENST00000477676 MT4P47944 62 aa1.7□□□□□ -2.14
CKS1B-207ENST00000477676 KRTAP19-3Q7Z4W3 81 aa1.7□□□□□ -2.14
CKS1B-207ENST00000477676 MT1MQ8N339 61 aa1.64□□□□□ -2.15
CKS1B-207ENST00000477676 MT1GP13640 62 aa1.63□□□□□ -2.15
CKS1B-207ENST00000477676 KRTAP19-5Q3LI72 72 aa1.63□□□□□ -2.15
CKS1B-207ENST00000477676 KRTAP13-4Q3LI77 160 aa1.62□□□□□ -2.15
CKS1B-207ENST00000477676 MT1LQ93083 61 aa1.6□□□□□ -2.15
CKS1B-207ENST00000477676 A0A0D9SG42 100 aa1.57□□□□□ -2.16
CKS1B-207ENST00000477676 KRTAP20-2Q3LI61 65 aa1.57□□□□□ -2.16
CKS1B-207ENST00000477676 SYNE1Q8NF91 8797 aaKnown RBP1.57□□□□□ -2.16
CKS1B-207ENST00000477676 C10orf95Q9H7T3 257 aa1.51□□□□□ -2.17
CKS1B-207ENST00000477676 MUC5BQ9HC84 5762 aaPredicted RBP1.5□□□□□ -2.17
CKS1B-207ENST00000477676 AHNAKQ09666 5890 aaKnown RBP1.5□□□□□ -2.17
CKS1B-207ENST00000477676 KRTAP12-4P60329 112 aa1.5□□□□□ -2.17
CKS1B-207ENST00000477676 KRTAP12-1P59990 96 aa1.49□□□□□ -2.17
CKS1B-207ENST00000477676 MUC5ACP98088 5654 aa1.47□□□□□ -2.17
CKS1B-207ENST00000477676 KRTAP12-3P60328 96 aa1.42□□□□□ -2.18
CKS1B-207ENST00000477676 TNP1P09430 55 aa1.39□□□□□ -2.19
CKS1B-207ENST00000477676 KRTAP6-1Q3LI64 71 aa1.38□□□□□ -2.19
CKS1B-207ENST00000477676 MT1AP04731 61 aa1.35□□□□□ -2.19
CKS1B-207ENST00000477676 KRTAP6-2Q3LI66 62 aa1.34□□□□□ -2.19
CKS1B-207ENST00000477676 PHGR1C9JFL3 82 aa0.98□□□□□ -2.25
CKS1B-207ENST00000477676 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.28
CKS1B-207ENST00000477676 PRM1P04553 51 aa0.81□□□□□ -2.28
CKS1B-207ENST00000477676 KRTAP21-1Q3LI58 79 aa0.73□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 70.7 ms