RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 MDN1Q9NU22 5596 aa5.1□□□□□ -1.59
TOP3A-205ENST00000477508 K7ERS5 55 aa5.1□□□□□ -1.59
TOP3A-205ENST00000477508 LCE1AQ5T7P2 110 aa5.1□□□□□ -1.59
TOP3A-205ENST00000477508 A6NED7 52 aa5.07□□□□□ -1.6
TOP3A-205ENST00000477508 KRTAP2-3P0C7H8 128 aa5.06□□□□□ -1.6
TOP3A-205ENST00000477508 KRTAP2-4Q9BYR9 128 aa5.06□□□□□ -1.6
TOP3A-205ENST00000477508 TNP1P09430 55 aa5.04□□□□□ -1.6
TOP3A-205ENST00000477508 C10orf95Q9H7T3 257 aa5.03□□□□□ -1.6
TOP3A-205ENST00000477508 PRAC1Q96KF2 57 aa5.02□□□□□ -1.61
TOP3A-205ENST00000477508 SPRR2EP22531 72 aa4.99□□□□□ -1.61
TOP3A-205ENST00000477508 SPRR2BP35325 72 aa4.99□□□□□ -1.61
TOP3A-205ENST00000477508 SPRR2AP35326 72 aa4.99□□□□□ -1.61
TOP3A-205ENST00000477508 MT3P25713 68 aa4.97□□□□□ -1.61
TOP3A-205ENST00000477508 KRTAP19-7Q3SYF9 63 aa4.9□□□□□ -1.63
TOP3A-205ENST00000477508 KRTAP25-1Q3LHN0 102 aa4.89□□□□□ -1.63
TOP3A-205ENST00000477508 CDC42SE1Q9NRR8 79 aa4.89□□□□□ -1.63
TOP3A-205ENST00000477508 KRTAP2-2Q9BYT5 123 aa4.88□□□□□ -1.63
TOP3A-205ENST00000477508 KRTAP2-1Q9BYU5 128 aa4.88□□□□□ -1.63
TOP3A-205ENST00000477508 MT1EP04732 61 aa4.86□□□□□ -1.63
TOP3A-205ENST00000477508 LCE3AQ5TA76 89 aa4.86□□□□□ -1.63
TOP3A-205ENST00000477508 KRTAP19-5Q3LI72 72 aa4.84□□□□□ -1.63
TOP3A-205ENST00000477508 NDUFAF8A1L188 74 aa4.83□□□□□ -1.64
TOP3A-205ENST00000477508 SPRR2DP22532 72 aa4.82□□□□□ -1.64
TOP3A-205ENST00000477508 KRTAP19-3Q7Z4W3 81 aa4.78□□□□□ -1.64
TOP3A-205ENST00000477508 ROMO1P60602 79 aa4.75□□□□□ -1.65
TOP3A-205ENST00000477508 MT1GP13640 62 aa4.72□□□□□ -1.65
TOP3A-205ENST00000477508 KRTAP12-3P60328 96 aa4.71□□□□□ -1.66
TOP3A-205ENST00000477508 PP632Q6XCG6 107 aa4.71□□□□□ -1.66
TOP3A-205ENST00000477508 MT1LQ93083 61 aa4.68□□□□□ -1.66
TOP3A-205ENST00000477508 KRTAP5-3Q6L8H2 238 aa4.67□□□□□ -1.66
TOP3A-205ENST00000477508 BRK1Q8WUW1 75 aa4.62□□□□□ -1.67
TOP3A-205ENST00000477508 GPR98Q8WXG9 6306 aa4.61□□□□□ -1.67
TOP3A-205ENST00000477508 MT1MQ8N339 61 aa4.6□□□□□ -1.67
TOP3A-205ENST00000477508 DSTQ03001 7570 aaKnown RBP4.53□□□□□ -1.68
TOP3A-205ENST00000477508 KRTAP4-3Q9BYR4 195 aa4.43□□□□□ -1.7
TOP3A-205ENST00000477508 PMAIP1Q13794 54 aa4.38□□□□□ -1.71
TOP3A-205ENST00000477508 LCE3CQ5T5A8 94 aa4.36□□□□□ -1.71
TOP3A-205ENST00000477508 LCE1FQ5T754 118 aa4.32□□□□□ -1.72
TOP3A-205ENST00000477508 PRO0628Q9UI54 55 aa4.27□□□□□ -1.73
TOP3A-205ENST00000477508 KRTAP5-4Q6L8H1 288 aa4.26□□□□□ -1.73
TOP3A-205ENST00000477508 HMCN1Q96RW7 5635 aa4.21□□□□□ -1.74
TOP3A-205ENST00000477508 KRTAP5-5Q701N2 237 aaPredicted RBP4.2□□□□□ -1.74
TOP3A-205ENST00000477508 MT4P47944 62 aa4.18□□□□□ -1.74
TOP3A-205ENST00000477508 AHNAK2Q8IVF2 5795 aa4.16□□□□□ -1.74
TOP3A-205ENST00000477508 KRTAP5-10Q6L8G5 202 aa4.14□□□□□ -1.75
TOP3A-205ENST00000477508 LCE1EQ5T753 118 aa4.09□□□□□ -1.75
TOP3A-205ENST00000477508 KRTAP12-4P60329 112 aa4.08□□□□□ -1.76
TOP3A-205ENST00000477508 KRTAP9-6A8MVA2 160 aa4.05□□□□□ -1.76
TOP3A-205ENST00000477508 SPRR5A0A1B0GTR4 108 aa4.04□□□□□ -1.76
TOP3A-205ENST00000477508 KRTAP5-7Q6L8G8 165 aa4.03□□□□□ -1.76
TOP3A-205ENST00000477508 KTN1-AS1Q86SY8 53 aa4.02□□□□□ -1.77
TOP3A-205ENST00000477508 MT1AP04731 61 aa4□□□□□ -1.77
TOP3A-205ENST00000477508 KRTAP20-2Q3LI61 65 aa3.99□□□□□ -1.77
TOP3A-205ENST00000477508 SYNE1Q8NF91 8797 aaKnown RBP3.98□□□□□ -1.77
TOP3A-205ENST00000477508 KRTAP6-1Q3LI64 71 aa3.93□□□□□ -1.78
TOP3A-205ENST00000477508 KRTAP5-11Q6L8G4 156 aa3.77□□□□□ -1.81
TOP3A-205ENST00000477508 KRTAP5-2Q701N4 177 aa3.77□□□□□ -1.81
TOP3A-205ENST00000477508 KRTAP6-2Q3LI66 62 aa3.72□□□□□ -1.81
TOP3A-205ENST00000477508 LCE3EQ5T5B0 92 aa3.66□□□□□ -1.82
TOP3A-205ENST00000477508 LUZP6Q538Z0 58 aa3.52□□□□□ -1.85
TOP3A-205ENST00000477508 AHNAKQ09666 5890 aaKnown RBP3.51□□□□□ -1.85
TOP3A-205ENST00000477508 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.51□□□□□ -1.85
TOP3A-205ENST00000477508 MUC5ACP98088 5654 aa3.49□□□□□ -1.85
TOP3A-205ENST00000477508 KRTAP5-8O75690 187 aa3.48□□□□□ -1.85
TOP3A-205ENST00000477508 MUC5BQ9HC84 5762 aaPredicted RBP3.48□□□□□ -1.85
TOP3A-205ENST00000477508 OBSCNQ5VST9 7968 aa3.44□□□□□ -1.86
TOP3A-205ENST00000477508 KRTAP5-1Q6L8H4 278 aa3.32□□□□□ -1.88
TOP3A-205ENST00000477508 LCE3DQ9BYE3 92 aa3.21□□□□□ -1.9
TOP3A-205ENST00000477508 LCE1CQ5T751 118 aa3.08□□□□□ -1.92
TOP3A-205ENST00000477508 LCE1BQ5T7P3 118 aa3.08□□□□□ -1.92
TOP3A-205ENST00000477508 KRTAP4-4Q9BYR3 166 aa2.89□□□□□ -1.95
TOP3A-205ENST00000477508 KRTAP21-2Q3LI59 83 aa2.59□□□□□ -1.99
TOP3A-205ENST00000477508 INE1O15225 51 aa2.52□□□□□ -2.01
TOP3A-205ENST00000477508 PHGR1C9JFL3 82 aa2.42□□□□□ -2.02
TOP3A-205ENST00000477508 PRM1P04553 51 aa2.41□□□□□ -2.02
TOP3A-205ENST00000477508 MUC19Q7Z5P9 8384 aa2.11□□□□□ -2.07
TOP3A-205ENST00000477508 KRTAP21-1Q3LI58 79 aa1.85□□□□□ -2.11
TOP3A-205ENST00000477508 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 116.4 ms