RNA–Protein interactions for RNA: ENST00000476825.2

SPTAN1-207, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 3

Gene SPTAN1, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-207ENST00000476825 KRTAP10-7P60409 375 aaPredicted RBP3.66□□□□□ -1.82
SPTAN1-207ENST00000476825 MIR22HGQ0VDD5 57 aa3.66□□□□□ -1.82
SPTAN1-207ENST00000476825 KRTAP10-12P60413 245 aa3.64□□□□□ -1.83
SPTAN1-207ENST00000476825 KMT2DO14686 5537 aa3.62□□□□□ -1.83
SPTAN1-207ENST00000476825 A6NED7 52 aa3.62□□□□□ -1.83
SPTAN1-207ENST00000476825 KRTAP5-9P26371 169 aa3.58□□□□□ -1.84
SPTAN1-207ENST00000476825 C10orf95Q9H7T3 257 aa3.58□□□□□ -1.84
SPTAN1-207ENST00000476825 MUC12Q9UKN1 5478 aa3.57□□□□□ -1.84
SPTAN1-207ENST00000476825 NDUFAF8A1L188 74 aa3.55□□□□□ -1.84
SPTAN1-207ENST00000476825 KRTAP8-1Q8IUC2 63 aa3.53□□□□□ -1.84
SPTAN1-207ENST00000476825 CDC42SE1Q9NRR8 79 aa3.52□□□□□ -1.85
SPTAN1-207ENST00000476825 KRTAP2-3P0C7H8 128 aa3.51□□□□□ -1.85
SPTAN1-207ENST00000476825 KRTAP2-4Q9BYR9 128 aa3.51□□□□□ -1.85
SPTAN1-207ENST00000476825 SPRR2FQ96RM1 72 aa3.47□□□□□ -1.85
SPTAN1-207ENST00000476825 TNP1P09430 55 aa3.46□□□□□ -1.86
SPTAN1-207ENST00000476825 KRTAP19-7Q3SYF9 63 aa3.44□□□□□ -1.86
SPTAN1-207ENST00000476825 LCE3AQ5TA76 89 aa3.42□□□□□ -1.86
SPTAN1-207ENST00000476825 LCE1AQ5T7P2 110 aa3.41□□□□□ -1.86
SPTAN1-207ENST00000476825 MDN1Q9NU22 5596 aa3.4□□□□□ -1.87
SPTAN1-207ENST00000476825 KRTAP25-1Q3LHN0 102 aa3.4□□□□□ -1.87
SPTAN1-207ENST00000476825 MT1EP04732 61 aa3.38□□□□□ -1.87
SPTAN1-207ENST00000476825 KRTAP19-5Q3LI72 72 aa3.38□□□□□ -1.87
SPTAN1-207ENST00000476825 SPRR2EP22531 72 aa3.37□□□□□ -1.87
SPTAN1-207ENST00000476825 SPRR2BP35325 72 aa3.37□□□□□ -1.87
SPTAN1-207ENST00000476825 SPRR2AP35326 72 aa3.37□□□□□ -1.87
SPTAN1-207ENST00000476825 KRTAP2-2Q9BYT5 123 aa3.37□□□□□ -1.87
SPTAN1-207ENST00000476825 KRTAP2-1Q9BYU5 128 aa3.37□□□□□ -1.87
SPTAN1-207ENST00000476825 ROMO1P60602 79 aa3.36□□□□□ -1.87
SPTAN1-207ENST00000476825 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.33□□□□□ -1.88
SPTAN1-207ENST00000476825 GPR98Q8WXG9 6306 aa3.33□□□□□ -1.88
SPTAN1-207ENST00000476825 KRTAP19-3Q7Z4W3 81 aa3.29□□□□□ -1.88
SPTAN1-207ENST00000476825 KRTAP12-3P60328 96 aa3.27□□□□□ -1.89
SPTAN1-207ENST00000476825 KRTAP5-11Q6L8G4 156 aa3.27□□□□□ -1.89
SPTAN1-207ENST00000476825 MT1LQ93083 61 aa3.26□□□□□ -1.89
SPTAN1-207ENST00000476825 SPRR2DP22532 72 aa3.25□□□□□ -1.89
SPTAN1-207ENST00000476825 MT1GP13640 62 aa3.22□□□□□ -1.89
SPTAN1-207ENST00000476825 PP632Q6XCG6 107 aa3.2□□□□□ -1.9
SPTAN1-207ENST00000476825 MT1MQ8N339 61 aa3.2□□□□□ -1.9
SPTAN1-207ENST00000476825 KRTAP4-3Q9BYR4 195 aa3.12□□□□□ -1.91
SPTAN1-207ENST00000476825 LCE1EQ5T753 118 aa3.07□□□□□ -1.92
SPTAN1-207ENST00000476825 MT3P25713 68 aa3.04□□□□□ -1.92
SPTAN1-207ENST00000476825 LCE3CQ5T5A8 94 aa3.04□□□□□ -1.92
SPTAN1-207ENST00000476825 DSTQ03001 7570 aaKnown RBP3.03□□□□□ -1.92
SPTAN1-207ENST00000476825 KRTAP5-10Q6L8G5 202 aa2.97□□□□□ -1.93
SPTAN1-207ENST00000476825 KRTAP5-5Q701N2 237 aaPredicted RBP2.95□□□□□ -1.94
SPTAN1-207ENST00000476825 KRTAP5-4Q6L8H1 288 aa2.94□□□□□ -1.94
SPTAN1-207ENST00000476825 KRTAP5-7Q6L8G8 165 aa2.93□□□□□ -1.94
SPTAN1-207ENST00000476825 KRTAP9-6A8MVA2 160 aa2.91□□□□□ -1.94
SPTAN1-207ENST00000476825 AHNAK2Q8IVF2 5795 aa2.91□□□□□ -1.94
SPTAN1-207ENST00000476825 KRTAP5-1Q6L8H4 278 aa2.88□□□□□ -1.95
SPTAN1-207ENST00000476825 HMCN1Q96RW7 5635 aa2.88□□□□□ -1.95
SPTAN1-207ENST00000476825 MT4P47944 62 aa2.82□□□□□ -1.96
SPTAN1-207ENST00000476825 SPRR5A0A1B0GTR4 108 aa2.8□□□□□ -1.96
SPTAN1-207ENST00000476825 MT1AP04731 61 aa2.79□□□□□ -1.96
SPTAN1-207ENST00000476825 LCE1FQ5T754 118 aa2.79□□□□□ -1.96
SPTAN1-207ENST00000476825 KRTAP4-4Q9BYR3 166 aa2.77□□□□□ -1.97
SPTAN1-207ENST00000476825 KRTAP6-1Q3LI64 71 aa2.76□□□□□ -1.97
SPTAN1-207ENST00000476825 INE1O15225 51 aa2.75□□□□□ -1.97
SPTAN1-207ENST00000476825 SYNE1Q8NF91 8797 aaKnown RBP2.75□□□□□ -1.97
SPTAN1-207ENST00000476825 KRTAP20-2Q3LI61 65 aa2.73□□□□□ -1.97
SPTAN1-207ENST00000476825 KRTAP12-4P60329 112 aa2.71□□□□□ -1.98
SPTAN1-207ENST00000476825 KRTAP5-2Q701N4 177 aa2.63□□□□□ -1.99
SPTAN1-207ENST00000476825 AHNAKQ09666 5890 aaKnown RBP2.57□□□□□ -2
SPTAN1-207ENST00000476825 KRTAP6-2Q3LI66 62 aa2.57□□□□□ -2
SPTAN1-207ENST00000476825 MUC5ACP98088 5654 aa2.53□□□□□ -2
SPTAN1-207ENST00000476825 OBSCNQ5VST9 7968 aa2.5□□□□□ -2.01
SPTAN1-207ENST00000476825 MUC5BQ9HC84 5762 aaPredicted RBP2.45□□□□□ -2.02
SPTAN1-207ENST00000476825 KRTAP5-8O75690 187 aa2.4□□□□□ -2.03
SPTAN1-207ENST00000476825 LCE3EQ5T5B0 92 aa2.35□□□□□ -2.03
SPTAN1-207ENST00000476825 LCE3DQ9BYE3 92 aa2.22□□□□□ -2.05
SPTAN1-207ENST00000476825 LCE1CQ5T751 118 aa2.1□□□□□ -2.07
SPTAN1-207ENST00000476825 LCE1BQ5T7P3 118 aa2.1□□□□□ -2.07
SPTAN1-207ENST00000476825 KRTAP21-2Q3LI59 83 aa1.83□□□□□ -2.12
SPTAN1-207ENST00000476825 PRM1P04553 51 aa1.74□□□□□ -2.13
SPTAN1-207ENST00000476825 MUC19Q7Z5P9 8384 aa1.69□□□□□ -2.14
SPTAN1-207ENST00000476825 PHGR1C9JFL3 82 aa1.66□□□□□ -2.14
SPTAN1-207ENST00000476825 KRTAP21-1Q3LI58 79 aa1.32□□□□□ -2.2
SPTAN1-207ENST00000476825 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 81.6 ms