RNA–Protein interactions for RNA: ENST00000476642.5

HLA-DPA1-246, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-246ENST00000476642 A0A0A0MQY5 61 aa5.2□□□□□ -1.58
HLA-DPA1-246ENST00000476642 KRTAP4-8A0A0G2JLE6 195 aa5.15□□□□□ -1.59
HLA-DPA1-246ENST00000476642 KRTAP2-2Q9BYT5 123 aa5.15□□□□□ -1.59
HLA-DPA1-246ENST00000476642 KRTAP2-1Q9BYU5 128 aa5.15□□□□□ -1.59
HLA-DPA1-246ENST00000476642 LCE1AQ5T7P2 110 aa5.13□□□□□ -1.59
HLA-DPA1-246ENST00000476642 TNP1P09430 55 aa5.12□□□□□ -1.59
HLA-DPA1-246ENST00000476642 SPRR2DP22532 72 aa5.11□□□□□ -1.59
HLA-DPA1-246ENST00000476642 KRTAP15-1Q3LI76 137 aa5.11□□□□□ -1.59
HLA-DPA1-246ENST00000476642 C10orf95Q9H7T3 257 aa5.09□□□□□ -1.59
HLA-DPA1-246ENST00000476642 KRTAP4-12Q9BQ66 201 aa5.04□□□□□ -1.6
HLA-DPA1-246ENST00000476642 NDUFAF8A1L188 74 aa5.01□□□□□ -1.61
HLA-DPA1-246ENST00000476642 LCE3BQ5TA77 95 aa4.97□□□□□ -1.61
HLA-DPA1-246ENST00000476642 KRTAP19-7Q3SYF9 63 aa4.91□□□□□ -1.62
HLA-DPA1-246ENST00000476642 LCE3AQ5TA76 89 aa4.9□□□□□ -1.63
HLA-DPA1-246ENST00000476642 PP632Q6XCG6 107 aa4.9□□□□□ -1.63
HLA-DPA1-246ENST00000476642 KRTAP9-9Q9BYP9 154 aa4.89□□□□□ -1.63
HLA-DPA1-246ENST00000476642 KRTAP9-4Q9BYQ2 154 aa4.89□□□□□ -1.63
HLA-DPA1-246ENST00000476642 MT1EP04732 61 aa4.87□□□□□ -1.63
HLA-DPA1-246ENST00000476642 KRTAP19-5Q3LI72 72 aa4.87□□□□□ -1.63
HLA-DPA1-246ENST00000476642 KRTAP23-1A1A580 65 aa4.83□□□□□ -1.64
HLA-DPA1-246ENST00000476642 KRTAP19-3Q7Z4W3 81 aa4.8□□□□□ -1.64
HLA-DPA1-246ENST00000476642 LUZP6Q538Z0 58 aa4.79□□□□□ -1.64
HLA-DPA1-246ENST00000476642 KRTAP12-3P60328 96 aa4.76□□□□□ -1.65
HLA-DPA1-246ENST00000476642 LCE5AQ5TCM9 118 aa4.76□□□□□ -1.65
HLA-DPA1-246ENST00000476642 MT1GP13640 62 aa4.75□□□□□ -1.65
HLA-DPA1-246ENST00000476642 GPR98Q8WXG9 6306 aa4.74□□□□□ -1.65
HLA-DPA1-246ENST00000476642 MT1LQ93083 61 aa4.71□□□□□ -1.66
HLA-DPA1-246ENST00000476642 KRTAP4-9Q9BYQ8 210 aa4.67□□□□□ -1.66
HLA-DPA1-246ENST00000476642 DSTQ03001 7570 aaKnown RBP4.67□□□□□ -1.66
HLA-DPA1-246ENST00000476642 LCE1DQ5T752 114 aa4.65□□□□□ -1.67
HLA-DPA1-246ENST00000476642 LCE4AQ5TA78 99 aa4.65□□□□□ -1.67
HLA-DPA1-246ENST00000476642 KRTAP19-4Q3LI73 84 aa4.63□□□□□ -1.67
HLA-DPA1-246ENST00000476642 MT1MQ8N339 61 aa4.62□□□□□ -1.67
HLA-DPA1-246ENST00000476642 KRTAP4-7Q9BYR0 210 aa4.59□□□□□ -1.67
HLA-DPA1-246ENST00000476642 SPRR5A0A1B0GTR4 108 aa4.51□□□□□ -1.69
HLA-DPA1-246ENST00000476642 MT4P47944 62 aa4.48□□□□□ -1.69
HLA-DPA1-246ENST00000476642 KRTAP4-3Q9BYR4 195 aa4.43□□□□□ -1.7
HLA-DPA1-246ENST00000476642 HMCN1Q96RW7 5635 aa4.41□□□□□ -1.7
HLA-DPA1-246ENST00000476642 LCE3CQ5T5A8 94 aa4.41□□□□□ -1.7
HLA-DPA1-246ENST00000476642 KRTAP4-2Q9BYR5 136 aa4.41□□□□□ -1.7
HLA-DPA1-246ENST00000476642 KRTAP4-11Q9BYQ6 195 aa4.37□□□□□ -1.71
HLA-DPA1-246ENST00000476642 AHNAK2Q8IVF2 5795 aa4.31□□□□□ -1.72
HLA-DPA1-246ENST00000476642 KRTAP5-4Q6L8H1 288 aa4.31□□□□□ -1.72
HLA-DPA1-246ENST00000476642 KRTAP5-10Q6L8G5 202 aa4.29□□□□□ -1.72
HLA-DPA1-246ENST00000476642 INE1O15225 51 aa4.28□□□□□ -1.72
HLA-DPA1-246ENST00000476642 KRTAP5-5Q701N2 237 aaPredicted RBP4.2□□□□□ -1.74
HLA-DPA1-246ENST00000476642 KRTAP5-7Q6L8G8 165 aa4.17□□□□□ -1.74
HLA-DPA1-246ENST00000476642 KRTAP5-3Q6L8H2 238 aa4.16□□□□□ -1.74
HLA-DPA1-246ENST00000476642 KRTAP20-2Q3LI61 65 aa4.11□□□□□ -1.75
HLA-DPA1-246ENST00000476642 KRTAP12-4P60329 112 aa4.1□□□□□ -1.75
HLA-DPA1-246ENST00000476642 KRTAP9-6A8MVA2 160 aa4.06□□□□□ -1.76
HLA-DPA1-246ENST00000476642 MT1AP04731 61 aa4.03□□□□□ -1.76
HLA-DPA1-246ENST00000476642 SYNE1Q8NF91 8797 aaKnown RBP3.98□□□□□ -1.77
HLA-DPA1-246ENST00000476642 KRTAP6-1Q3LI64 71 aa3.94□□□□□ -1.78
HLA-DPA1-246ENST00000476642 KRTAP5-2Q701N4 177 aa3.76□□□□□ -1.81
HLA-DPA1-246ENST00000476642 KRTAP6-2Q3LI66 62 aa3.73□□□□□ -1.81
HLA-DPA1-246ENST00000476642 MT3P25713 68 aa3.71□□□□□ -1.82
HLA-DPA1-246ENST00000476642 KRTAP5-8O75690 187 aa3.67□□□□□ -1.82
HLA-DPA1-246ENST00000476642 AHNAKQ09666 5890 aaKnown RBP3.65□□□□□ -1.83
HLA-DPA1-246ENST00000476642 MUC5ACP98088 5654 aa3.61□□□□□ -1.83
HLA-DPA1-246ENST00000476642 MUC5BQ9HC84 5762 aaPredicted RBP3.6□□□□□ -1.83
HLA-DPA1-246ENST00000476642 OBSCNQ5VST9 7968 aa3.52□□□□□ -1.85
HLA-DPA1-246ENST00000476642 KRTAP5-1Q6L8H4 278 aa3.39□□□□□ -1.87
HLA-DPA1-246ENST00000476642 LCE1EQ5T753 118 aa3.34□□□□□ -1.87
HLA-DPA1-246ENST00000476642 LCE3DQ9BYE3 92 aa3.26□□□□□ -1.89
HLA-DPA1-246ENST00000476642 LCE3EQ5T5B0 92 aa3.12□□□□□ -1.91
HLA-DPA1-246ENST00000476642 LCE1CQ5T751 118 aa3.08□□□□□ -1.92
HLA-DPA1-246ENST00000476642 LCE1BQ5T7P3 118 aa3.08□□□□□ -1.92
HLA-DPA1-246ENST00000476642 KRTAP5-11Q6L8G4 156 aa2.96□□□□□ -1.94
HLA-DPA1-246ENST00000476642 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.91□□□□□ -1.94
HLA-DPA1-246ENST00000476642 PRM1P04553 51 aa2.85□□□□□ -1.95
HLA-DPA1-246ENST00000476642 LCE1FQ5T754 118 aa2.7□□□□□ -1.98
HLA-DPA1-246ENST00000476642 KRTAP21-2Q3LI59 83 aa2.6□□□□□ -1.99
HLA-DPA1-246ENST00000476642 PHGR1C9JFL3 82 aa2.55□□□□□ -2
HLA-DPA1-246ENST00000476642 KRTAP4-4Q9BYR3 166 aa2.44□□□□□ -2.02
HLA-DPA1-246ENST00000476642 MUC19Q7Z5P9 8384 aa2.22□□□□□ -2.05
HLA-DPA1-246ENST00000476642 KRTAP21-1Q3LI58 79 aa1.94□□□□□ -2.1
HLA-DPA1-246ENST00000476642 MUC16Q8WXI7 14507 aa1.55□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 64.9 ms