RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 V9GYY9 64 aa4.36□□□□□ -1.71
HDAC6-219ENST00000476625 PRR15LQ9BU68 103 aa4.35□□□□□ -1.71
HDAC6-219ENST00000476625 KRTAP19-5Q3LI72 72 aa4.34□□□□□ -1.71
HDAC6-219ENST00000476625 KRTAP4-3Q9BYR4 195 aa4.34□□□□□ -1.71
HDAC6-219ENST00000476625 A0A1B0GU69 56 aa4.33□□□□□ -1.72
HDAC6-219ENST00000476625 MT1MQ8N339 61 aa4.31□□□□□ -1.72
HDAC6-219ENST00000476625 MT1GP13640 62 aa4.3□□□□□ -1.72
HDAC6-219ENST00000476625 CAMK2N1Q7Z7J9 78 aa4.3□□□□□ -1.72
HDAC6-219ENST00000476625 A0A1B0GU33 70 aa4.29□□□□□ -1.72
HDAC6-219ENST00000476625 LINC01558Q9Y6Z2 57 aa4.28□□□□□ -1.72
HDAC6-219ENST00000476625 BRK1Q8WUW1 75 aa4.27□□□□□ -1.73
HDAC6-219ENST00000476625 KRTAP5-4Q6L8H1 288 aa4.26□□□□□ -1.73
HDAC6-219ENST00000476625 A0A0D9SG42 100 aa4.25□□□□□ -1.73
HDAC6-219ENST00000476625 KRTAP15-1Q3LI76 137 aa4.25□□□□□ -1.73
HDAC6-219ENST00000476625 PMAIP1Q13794 54 aa4.24□□□□□ -1.73
HDAC6-219ENST00000476625 MT1LQ93083 61 aa4.23□□□□□ -1.73
HDAC6-219ENST00000476625 Q1T7F1 81 aa4.22□□□□□ -1.73
HDAC6-219ENST00000476625 KRTAP5-7Q6L8G8 165 aa4.22□□□□□ -1.73
HDAC6-219ENST00000476625 PP632Q6XCG6 107 aa4.22□□□□□ -1.73
HDAC6-219ENST00000476625 KRTAP5-3Q6L8H2 238 aa4.2□□□□□ -1.74
HDAC6-219ENST00000476625 UQCR11O14957 56 aa4.18□□□□□ -1.74
HDAC6-219ENST00000476625 A0A0A0MQY5 61 aa4.16□□□□□ -1.74
HDAC6-219ENST00000476625 SPATA8Q6RVD6 105 aa4.15□□□□□ -1.75
HDAC6-219ENST00000476625 KRTAP4-7Q9BYR0 210 aa4.14□□□□□ -1.75
HDAC6-219ENST00000476625 SPRR5A0A1B0GTR4 108 aa4.11□□□□□ -1.75
HDAC6-219ENST00000476625 SPINT4Q6UDR6 99 aa4.09□□□□□ -1.75
HDAC6-219ENST00000476625 KRTAP20-2Q3LI61 65 aa4.08□□□□□ -1.76
HDAC6-219ENST00000476625 C10orf95Q9H7T3 257 aa4.08□□□□□ -1.76
HDAC6-219ENST00000476625 LCE3AQ5TA76 89 aa4.07□□□□□ -1.76
HDAC6-219ENST00000476625 KTN1-AS1Q86SY8 53 aa4.07□□□□□ -1.76
HDAC6-219ENST00000476625 PSPHP1O15172 72 aa4.06□□□□□ -1.76
HDAC6-219ENST00000476625 MIR22HGQ0VDD5 57 aa4.06□□□□□ -1.76
HDAC6-219ENST00000476625 K7ERS5 55 aa4.05□□□□□ -1.76
HDAC6-219ENST00000476625 KRTAP12-1P59990 96 aa4.05□□□□□ -1.76
HDAC6-219ENST00000476625 KRTAP4-11Q9BYQ6 195 aa4.04□□□□□ -1.76
HDAC6-219ENST00000476625 A8MU10 97 aa4.02□□□□□ -1.77
HDAC6-219ENST00000476625 A6NED7 52 aa4□□□□□ -1.77
HDAC6-219ENST00000476625 CDC42SE1Q9NRR8 79 aa3.98□□□□□ -1.77
HDAC6-219ENST00000476625 KRTAP5-5Q701N2 237 aaPredicted RBP3.97□□□□□ -1.77
HDAC6-219ENST00000476625 KRTAP4-2Q9BYR5 136 aa3.96□□□□□ -1.78
HDAC6-219ENST00000476625 TNP1P09430 55 aa3.9□□□□□ -1.79
HDAC6-219ENST00000476625 SYNE1Q8NF91 8797 aaKnown RBP3.89□□□□□ -1.79
HDAC6-219ENST00000476625 KRTAP12-4P60329 112 aa3.85□□□□□ -1.79
HDAC6-219ENST00000476625 KRTAP12-3P60328 96 aa3.84□□□□□ -1.79
HDAC6-219ENST00000476625 KRTAP25-1Q3LHN0 102 aa3.81□□□□□ -1.8
HDAC6-219ENST00000476625 PRAC1Q96KF2 57 aa3.75□□□□□ -1.81
HDAC6-219ENST00000476625 ROMO1P60602 79 aa3.73□□□□□ -1.81
HDAC6-219ENST00000476625 KRTAP5-8O75690 187 aa3.7□□□□□ -1.82
HDAC6-219ENST00000476625 KRTAP5-2Q701N4 177 aa3.68□□□□□ -1.82
HDAC6-219ENST00000476625 MUC5ACP98088 5654 aa3.66□□□□□ -1.82
HDAC6-219ENST00000476625 KRTAP6-1Q3LI64 71 aa3.64□□□□□ -1.83
HDAC6-219ENST00000476625 AHNAKQ09666 5890 aaKnown RBP3.63□□□□□ -1.83
HDAC6-219ENST00000476625 MUC5BQ9HC84 5762 aaPredicted RBP3.59□□□□□ -1.83
HDAC6-219ENST00000476625 MT1AP04731 61 aa3.57□□□□□ -1.84
HDAC6-219ENST00000476625 OBSCNQ5VST9 7968 aa3.54□□□□□ -1.84
HDAC6-219ENST00000476625 KRTAP6-2Q3LI66 62 aa3.53□□□□□ -1.84
HDAC6-219ENST00000476625 LCE3CQ5T5A8 94 aa3.5□□□□□ -1.85
HDAC6-219ENST00000476625 KRTAP9-6A8MVA2 160 aa3.43□□□□□ -1.86
HDAC6-219ENST00000476625 KRTAP5-1Q6L8H4 278 aa3.38□□□□□ -1.87
HDAC6-219ENST00000476625 MT3P25713 68 aa3.28□□□□□ -1.88
HDAC6-219ENST00000476625 NDUFAF8A1L188 74 aa3.26□□□□□ -1.89
HDAC6-219ENST00000476625 LUZP6Q538Z0 58 aa3.1□□□□□ -1.91
HDAC6-219ENST00000476625 LCE1FQ5T754 118 aa3.06□□□□□ -1.92
HDAC6-219ENST00000476625 LCE1EQ5T753 118 aa3□□□□□ -1.93
HDAC6-219ENST00000476625 LCE1BQ5T7P3 118 aa3□□□□□ -1.93
HDAC6-219ENST00000476625 LCE1CQ5T751 118 aa2.82□□□□□ -1.96
HDAC6-219ENST00000476625 INE1O15225 51 aa2.76□□□□□ -1.97
HDAC6-219ENST00000476625 KRTAP5-11Q6L8G4 156 aa2.73□□□□□ -1.97
HDAC6-219ENST00000476625 LCE3EQ5T5B0 92 aa2.63□□□□□ -1.99
HDAC6-219ENST00000476625 PHGR1C9JFL3 82 aa2.57□□□□□ -2
HDAC6-219ENST00000476625 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.52□□□□□ -2.01
HDAC6-219ENST00000476625 LCE3DQ9BYE3 92 aa2.48□□□□□ -2.01
HDAC6-219ENST00000476625 KRTAP21-2Q3LI59 83 aa2.38□□□□□ -2.03
HDAC6-219ENST00000476625 KRTAP4-4Q9BYR3 166 aa2.33□□□□□ -2.04
HDAC6-219ENST00000476625 MUC19Q7Z5P9 8384 aa2.2□□□□□ -2.06
HDAC6-219ENST00000476625 KRTAP21-1Q3LI58 79 aa1.89□□□□□ -2.11
HDAC6-219ENST00000476625 PRM1P04553 51 aa1.86□□□□□ -2.11
HDAC6-219ENST00000476625 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 110.3 ms