RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 KRTAP4-8Q9BYQ9 185 aa2.72□□□□□ -1.97
CLDN4-205ENST00000476494 KRTAP12-2P59991 146 aa2.7□□□□□ -1.98
CLDN4-205ENST00000476494 MT4P47944 62 aa2.68□□□□□ -1.98
CLDN4-205ENST00000476494 CAMK2N1Q7Z7J9 78 aa2.68□□□□□ -1.98
CLDN4-205ENST00000476494 LOC100996750A0A140TA64 210 aa2.66□□□□□ -1.98
CLDN4-205ENST00000476494 KRTAP4-6Q9BYQ5 205 aa2.66□□□□□ -1.98
CLDN4-205ENST00000476494 PMAIP1Q13794 54 aa2.65□□□□□ -1.99
CLDN4-205ENST00000476494 LCE4AQ5TA78 99 aa2.65□□□□□ -1.99
CLDN4-205ENST00000476494 MT1XP80297 61 aa2.64□□□□□ -1.99
CLDN4-205ENST00000476494 PRO2289Q9P1D8 64 aa2.64□□□□□ -1.99
CLDN4-205ENST00000476494 ROMO1P60602 79 aa2.61□□□□□ -1.99
CLDN4-205ENST00000476494 LCE5AQ5TCM9 118 aa2.57□□□□□ -2
CLDN4-205ENST00000476494 KRTAP5-4Q6L8H1 288 aa2.57□□□□□ -2
CLDN4-205ENST00000476494 C10orf95Q9H7T3 257 aa2.57□□□□□ -2
CLDN4-205ENST00000476494 KRTAP25-1Q3LHN0 102 aa2.56□□□□□ -2
CLDN4-205ENST00000476494 TNP1P09430 55 aa2.55□□□□□ -2
CLDN4-205ENST00000476494 AHNAKQ09666 5890 aaKnown RBP2.54□□□□□ -2
CLDN4-205ENST00000476494 KTN1-AS1Q86SY8 53 aa2.52□□□□□ -2.01
CLDN4-205ENST00000476494 KRTAP23-1A1A580 65 aa2.51□□□□□ -2.01
CLDN4-205ENST00000476494 MUC5ACP98088 5654 aa2.5□□□□□ -2.01
CLDN4-205ENST00000476494 KRTAP10-7P60409 375 aaPredicted RBP2.5□□□□□ -2.01
CLDN4-205ENST00000476494 KRTAP10-12P60413 245 aa2.5□□□□□ -2.01
CLDN4-205ENST00000476494 PP632Q6XCG6 107 aa2.49□□□□□ -2.01
CLDN4-205ENST00000476494 MUC5BQ9HC84 5762 aaPredicted RBP2.47□□□□□ -2.01
CLDN4-205ENST00000476494 KRTAP19-3Q7Z4W3 81 aa2.44□□□□□ -2.02
CLDN4-205ENST00000476494 KRTAP20-2Q3LI61 65 aa2.42□□□□□ -2.02
CLDN4-205ENST00000476494 PRAC1Q96KF2 57 aa2.42□□□□□ -2.02
CLDN4-205ENST00000476494 KRTAP19-7Q3SYF9 63 aa2.39□□□□□ -2.03
CLDN4-205ENST00000476494 LCE3AQ5TA76 89 aa2.39□□□□□ -2.03
CLDN4-205ENST00000476494 MT1EP04732 61 aa2.36□□□□□ -2.03
CLDN4-205ENST00000476494 KRTAP5-8O75690 187 aa2.35□□□□□ -2.03
CLDN4-205ENST00000476494 SVIPQ8NHG7 77 aa2.35□□□□□ -2.03
CLDN4-205ENST00000476494 KRTAP4-11Q9BYQ6 195 aa2.35□□□□□ -2.03
CLDN4-205ENST00000476494 KRTAP4-7Q9BYR0 210 aa2.35□□□□□ -2.03
CLDN4-205ENST00000476494 KRTAP12-3P60328 96 aa2.34□□□□□ -2.03
CLDN4-205ENST00000476494 MT1GP13640 62 aa2.32□□□□□ -2.04
CLDN4-205ENST00000476494 KRTAP19-5Q3LI72 72 aa2.32□□□□□ -2.04
CLDN4-205ENST00000476494 KRTAP19-4Q3LI73 84 aa2.32□□□□□ -2.04
CLDN4-205ENST00000476494 KRTAP15-1Q3LI76 137 aa2.29□□□□□ -2.04
CLDN4-205ENST00000476494 MT1MQ8N339 61 aa2.28□□□□□ -2.04
CLDN4-205ENST00000476494 KRTAP4-3Q9BYR4 195 aa2.28□□□□□ -2.04
CLDN4-205ENST00000476494 KRTAP5-2Q701N4 177 aa2.23□□□□□ -2.05
CLDN4-205ENST00000476494 KRTAP9-9Q9BYP9 154 aa2.23□□□□□ -2.05
CLDN4-205ENST00000476494 KRTAP5-5Q701N2 237 aaPredicted RBP2.21□□□□□ -2.06
CLDN4-205ENST00000476494 MT1LQ93083 61 aa2.21□□□□□ -2.06
CLDN4-205ENST00000476494 SYNE1Q8NF91 8797 aaKnown RBP2.21□□□□□ -2.06
CLDN4-205ENST00000476494 KRTAP12-4P60329 112 aa2.18□□□□□ -2.06
CLDN4-205ENST00000476494 LCE3CQ5T5A8 94 aa2.18□□□□□ -2.06
CLDN4-205ENST00000476494 OBSCNQ5VST9 7968 aa2.12□□□□□ -2.07
CLDN4-205ENST00000476494 LUZP6Q538Z0 58 aa2.08□□□□□ -2.08
CLDN4-205ENST00000476494 KRTAP9-4Q9BYQ2 154 aa2.08□□□□□ -2.08
CLDN4-205ENST00000476494 H3BS24 57 aa2.06□□□□□ -2.08
CLDN4-205ENST00000476494 KRTAP5-1Q6L8H4 278 aa2.05□□□□□ -2.08
CLDN4-205ENST00000476494 KRTAP4-2Q9BYR5 136 aa2.05□□□□□ -2.08
CLDN4-205ENST00000476494 KRTAP9-6A8MVA2 160 aa2□□□□□ -2.09
CLDN4-205ENST00000476494 NDUFAF8A1L188 74 aa1.92□□□□□ -2.1
CLDN4-205ENST00000476494 MT1AP04731 61 aa1.9□□□□□ -2.11
CLDN4-205ENST00000476494 KRTAP4-12Q9BQ66 201 aa1.89□□□□□ -2.11
CLDN4-205ENST00000476494 KRTAP6-1Q3LI64 71 aa1.87□□□□□ -2.11
CLDN4-205ENST00000476494 KRTAP6-2Q3LI66 62 aa1.87□□□□□ -2.11
CLDN4-205ENST00000476494 MT3P25713 68 aa1.75□□□□□ -2.13
CLDN4-205ENST00000476494 A0A0A0MQY5 61 aa1.74□□□□□ -2.13
CLDN4-205ENST00000476494 LCE1EQ5T753 118 aa1.7□□□□□ -2.14
CLDN4-205ENST00000476494 PHGR1C9JFL3 82 aa1.69□□□□□ -2.14
CLDN4-205ENST00000476494 KRTAP5-11Q6L8G4 156 aa1.69□□□□□ -2.14
CLDN4-205ENST00000476494 INE1O15225 51 aa1.66□□□□□ -2.14
CLDN4-205ENST00000476494 LCE3DQ9BYE3 92 aa1.64□□□□□ -2.15
CLDN4-205ENST00000476494 LCE3EQ5T5B0 92 aa1.59□□□□□ -2.15
CLDN4-205ENST00000476494 LCE1CQ5T751 118 aa1.59□□□□□ -2.15
CLDN4-205ENST00000476494 LCE1BQ5T7P3 118 aa1.59□□□□□ -2.15
CLDN4-205ENST00000476494 LCE1FQ5T754 118 aa1.58□□□□□ -2.16
CLDN4-205ENST00000476494 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.53□□□□□ -2.16
CLDN4-205ENST00000476494 MUC19Q7Z5P9 8384 aa1.37□□□□□ -2.19
CLDN4-205ENST00000476494 PRM1P04553 51 aa1.32□□□□□ -2.2
CLDN4-205ENST00000476494 KRTAP4-4Q9BYR3 166 aa1.3□□□□□ -2.2
CLDN4-205ENST00000476494 KRTAP21-1Q3LI58 79 aa1.29□□□□□ -2.2
CLDN4-205ENST00000476494 KRTAP21-2Q3LI59 83 aa1.27□□□□□ -2.21
CLDN4-205ENST00000476494 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 46.4 ms