RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 A8MU10 97 aa6.04□□□□□ -1.44
SNX13-207ENST00000475800 KRTAP10-7P60409 375 aaPredicted RBP6.03□□□□□ -1.44
SNX13-207ENST00000475800 KRTAP10-12P60413 245 aa6.03□□□□□ -1.44
SNX13-207ENST00000475800 KRTAP8-1Q8IUC2 63 aa6.03□□□□□ -1.44
SNX13-207ENST00000475800 Q1T7F1 81 aa6.01□□□□□ -1.45
SNX13-207ENST00000475800 RPS28P62857 69 aaKnown RBP5.95□□□□□ -1.46
SNX13-207ENST00000475800 LCE1AQ5T7P2 110 aa5.94□□□□□ -1.46
SNX13-207ENST00000475800 LCE5AQ5TCM9 118 aa5.93□□□□□ -1.46
SNX13-207ENST00000475800 MIR22HGQ0VDD5 57 aa5.92□□□□□ -1.46
SNX13-207ENST00000475800 SPRR2DP22532 72 aa5.9□□□□□ -1.46
SNX13-207ENST00000475800 KRTAP2-2Q9BYT5 123 aa5.9□□□□□ -1.46
SNX13-207ENST00000475800 KRTAP2-1Q9BYU5 128 aa5.9□□□□□ -1.46
SNX13-207ENST00000475800 K7ERS5 55 aa5.82□□□□□ -1.48
SNX13-207ENST00000475800 A6NED7 52 aa5.78□□□□□ -1.48
SNX13-207ENST00000475800 TNP1P09430 55 aa5.78□□□□□ -1.48
SNX13-207ENST00000475800 C10orf95Q9H7T3 257 aa5.78□□□□□ -1.48
SNX13-207ENST00000475800 KRTAP19-7Q3SYF9 63 aa5.65□□□□□ -1.5
SNX13-207ENST00000475800 KTN1-AS1Q86SY8 53 aa5.62□□□□□ -1.51
SNX13-207ENST00000475800 MT1EP04732 61 aa5.6□□□□□ -1.51
SNX13-207ENST00000475800 KRTAP25-1Q3LHN0 102 aa5.6□□□□□ -1.51
SNX13-207ENST00000475800 KRTAP19-4Q3LI73 84 aa5.59□□□□□ -1.51
SNX13-207ENST00000475800 LCE3AQ5TA76 89 aa5.59□□□□□ -1.51
SNX13-207ENST00000475800 KRTAP19-5Q3LI72 72 aa5.58□□□□□ -1.52
SNX13-207ENST00000475800 CDC42SE1Q9NRR8 79 aa5.58□□□□□ -1.52
SNX13-207ENST00000475800 LUZP6Q538Z0 58 aa5.53□□□□□ -1.52
SNX13-207ENST00000475800 KRTAP19-3Q7Z4W3 81 aa5.51□□□□□ -1.53
SNX13-207ENST00000475800 MT1GP13640 62 aa5.43□□□□□ -1.54
SNX13-207ENST00000475800 KRTAP15-1Q3LI76 137 aa5.43□□□□□ -1.54
SNX13-207ENST00000475800 BRK1Q8WUW1 75 aa5.43□□□□□ -1.54
SNX13-207ENST00000475800 GPR98Q8WXG9 6306 aa5.43□□□□□ -1.54
SNX13-207ENST00000475800 DSTQ03001 7570 aaKnown RBP5.42□□□□□ -1.54
SNX13-207ENST00000475800 ROMO1P60602 79 aa5.42□□□□□ -1.54
SNX13-207ENST00000475800 PP632Q6XCG6 107 aa5.42□□□□□ -1.54
SNX13-207ENST00000475800 NDUFAF8A1L188 74 aa5.41□□□□□ -1.54
SNX13-207ENST00000475800 KRTAP12-3P60328 96 aa5.41□□□□□ -1.54
SNX13-207ENST00000475800 MT1LQ93083 61 aa5.4□□□□□ -1.54
SNX13-207ENST00000475800 MT1MQ8N339 61 aa5.31□□□□□ -1.56
SNX13-207ENST00000475800 MT4P47944 62 aa5.23□□□□□ -1.57
SNX13-207ENST00000475800 HMCN1Q96RW7 5635 aa5.15□□□□□ -1.58
SNX13-207ENST00000475800 KRTAP4-3Q9BYR4 195 aa5.11□□□□□ -1.59
SNX13-207ENST00000475800 AHNAK2Q8IVF2 5795 aa5.06□□□□□ -1.6
SNX13-207ENST00000475800 LCE3CQ5T5A8 94 aa5□□□□□ -1.61
SNX13-207ENST00000475800 KRTAP5-4Q6L8H1 288 aa4.96□□□□□ -1.62
SNX13-207ENST00000475800 KRTAP5-10Q6L8G5 202 aa4.95□□□□□ -1.62
SNX13-207ENST00000475800 KRTAP5-5Q701N2 237 aaPredicted RBP4.84□□□□□ -1.63
SNX13-207ENST00000475800 KRTAP20-2Q3LI61 65 aa4.76□□□□□ -1.65
SNX13-207ENST00000475800 KRTAP5-7Q6L8G8 165 aa4.76□□□□□ -1.65
SNX13-207ENST00000475800 KRTAP12-4P60329 112 aa4.7□□□□□ -1.66
SNX13-207ENST00000475800 SPRR5A0A1B0GTR4 108 aa4.69□□□□□ -1.66
SNX13-207ENST00000475800 KRTAP9-6A8MVA2 160 aa4.66□□□□□ -1.66
SNX13-207ENST00000475800 SYNE1Q8NF91 8797 aaKnown RBP4.61□□□□□ -1.67
SNX13-207ENST00000475800 MT1AP04731 61 aa4.61□□□□□ -1.67
SNX13-207ENST00000475800 KRTAP6-1Q3LI64 71 aa4.53□□□□□ -1.68
SNX13-207ENST00000475800 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.53□□□□□ -1.68
SNX13-207ENST00000475800 MT3P25713 68 aa4.47□□□□□ -1.69
SNX13-207ENST00000475800 KRTAP5-2Q701N4 177 aa4.35□□□□□ -1.71
SNX13-207ENST00000475800 KRTAP5-11Q6L8G4 156 aa4.29□□□□□ -1.72
SNX13-207ENST00000475800 KRTAP6-2Q3LI66 62 aa4.28□□□□□ -1.72
SNX13-207ENST00000475800 KRTAP5-8O75690 187 aa4.25□□□□□ -1.73
SNX13-207ENST00000475800 AHNAKQ09666 5890 aaKnown RBP4.18□□□□□ -1.74
SNX13-207ENST00000475800 MUC5BQ9HC84 5762 aaPredicted RBP4.17□□□□□ -1.74
SNX13-207ENST00000475800 LCE1FQ5T754 118 aa4.16□□□□□ -1.74
SNX13-207ENST00000475800 MUC5ACP98088 5654 aa4.15□□□□□ -1.74
SNX13-207ENST00000475800 OBSCNQ5VST9 7968 aa4.15□□□□□ -1.75
SNX13-207ENST00000475800 INE1O15225 51 aa4.12□□□□□ -1.75
SNX13-207ENST00000475800 KRTAP5-1Q6L8H4 278 aa3.92□□□□□ -1.78
SNX13-207ENST00000475800 LCE1EQ5T753 118 aa3.83□□□□□ -1.8
SNX13-207ENST00000475800 KRTAP4-4Q9BYR3 166 aa3.81□□□□□ -1.8
SNX13-207ENST00000475800 LCE3DQ9BYE3 92 aa3.67□□□□□ -1.82
SNX13-207ENST00000475800 LCE1BQ5T7P3 118 aa3.59□□□□□ -1.83
SNX13-207ENST00000475800 LCE1CQ5T751 118 aa3.54□□□□□ -1.84
SNX13-207ENST00000475800 LCE3EQ5T5B0 92 aa3.51□□□□□ -1.85
SNX13-207ENST00000475800 KRTAP21-2Q3LI59 83 aa2.98□□□□□ -1.93
SNX13-207ENST00000475800 PHGR1C9JFL3 82 aa2.95□□□□□ -1.94
SNX13-207ENST00000475800 PRM1P04553 51 aa2.76□□□□□ -1.97
SNX13-207ENST00000475800 MUC19Q7Z5P9 8384 aa2.59□□□□□ -1.99
SNX13-207ENST00000475800 KRTAP21-1Q3LI58 79 aa2.19□□□□□ -2.06
SNX13-207ENST00000475800 MUC16Q8WXI7 14507 aa1.82□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 34.3 ms