RNA–Protein interactions for RNA: ENST00000475657.1

FAM3A-218, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-218ENST00000475657 CDC42SE1Q9NRR8 79 aa5.45□□□□□ -1.54
FAM3A-218ENST00000475657 KRTAP5-10Q6L8G5 202 aa5.44□□□□□ -1.54
FAM3A-218ENST00000475657 K7ERS5 55 aa5.42□□□□□ -1.54
FAM3A-218ENST00000475657 LCE5AQ5TCM9 118 aa5.41□□□□□ -1.54
FAM3A-218ENST00000475657 LCE4AQ5TA78 99 aa5.36□□□□□ -1.55
FAM3A-218ENST00000475657 PRO0628Q9UI54 55 aa5.36□□□□□ -1.55
FAM3A-218ENST00000475657 MT4P47944 62 aa5.33□□□□□ -1.56
FAM3A-218ENST00000475657 KRTAP5-7Q6L8G8 165 aa5.33□□□□□ -1.56
FAM3A-218ENST00000475657 KRTAP19-3Q7Z4W3 81 aa5.3□□□□□ -1.56
FAM3A-218ENST00000475657 BRK1Q8WUW1 75 aa5.3□□□□□ -1.56
FAM3A-218ENST00000475657 KRTAP19-7Q3SYF9 63 aa5.23□□□□□ -1.57
FAM3A-218ENST00000475657 C10orf95Q9H7T3 257 aa5.23□□□□□ -1.57
FAM3A-218ENST00000475657 MT1EP04732 61 aa5.21□□□□□ -1.58
FAM3A-218ENST00000475657 KRTAP5-3Q6L8H2 238 aa5.17□□□□□ -1.58
FAM3A-218ENST00000475657 TNP1P09430 55 aa5.16□□□□□ -1.58
FAM3A-218ENST00000475657 KRTAP5-4Q6L8H1 288 aa5.16□□□□□ -1.58
FAM3A-218ENST00000475657 ROMO1P60602 79 aa5.13□□□□□ -1.59
FAM3A-218ENST00000475657 KRTAP4-6Q9BYQ5 205 aa5.13□□□□□ -1.59
FAM3A-218ENST00000475657 MT1GP13640 62 aa5.12□□□□□ -1.59
FAM3A-218ENST00000475657 KRTAP25-1Q3LHN0 102 aa5.11□□□□□ -1.59
FAM3A-218ENST00000475657 SPRR5A0A1B0GTR4 108 aa5.08□□□□□ -1.6
FAM3A-218ENST00000475657 PP632Q6XCG6 107 aa5.08□□□□□ -1.6
FAM3A-218ENST00000475657 PMAIP1Q13794 54 aa5.02□□□□□ -1.61
FAM3A-218ENST00000475657 MT1MQ8N339 61 aa4.99□□□□□ -1.61
FAM3A-218ENST00000475657 KRTAP19-5Q3LI72 72 aa4.98□□□□□ -1.61
FAM3A-218ENST00000475657 LCE3AQ5TA76 89 aa4.96□□□□□ -1.62
FAM3A-218ENST00000475657 KRTAP23-1A1A580 65 aa4.95□□□□□ -1.62
FAM3A-218ENST00000475657 KTN1-AS1Q86SY8 53 aa4.89□□□□□ -1.63
FAM3A-218ENST00000475657 KRTAP20-2Q3LI61 65 aa4.88□□□□□ -1.63
FAM3A-218ENST00000475657 MT1LQ93083 61 aa4.87□□□□□ -1.63
FAM3A-218ENST00000475657 KRTAP4-3Q9BYR4 195 aa4.86□□□□□ -1.63
FAM3A-218ENST00000475657 KRTAP12-3P60328 96 aa4.79□□□□□ -1.64
FAM3A-218ENST00000475657 AHNAKQ09666 5890 aaKnown RBP4.78□□□□□ -1.64
FAM3A-218ENST00000475657 KRTAP12-4P60329 112 aa4.7□□□□□ -1.66
FAM3A-218ENST00000475657 PRAC1Q96KF2 57 aa4.69□□□□□ -1.66
FAM3A-218ENST00000475657 MUC5ACP98088 5654 aa4.68□□□□□ -1.66
FAM3A-218ENST00000475657 KRTAP4-7Q9BYR0 210 aa4.67□□□□□ -1.66
FAM3A-218ENST00000475657 KRTAP5-5Q701N2 237 aaPredicted RBP4.66□□□□□ -1.66
FAM3A-218ENST00000475657 MUC5BQ9HC84 5762 aaPredicted RBP4.64□□□□□ -1.67
FAM3A-218ENST00000475657 KRTAP15-1Q3LI76 137 aa4.63□□□□□ -1.67
FAM3A-218ENST00000475657 KRTAP4-11Q9BYQ6 195 aa4.62□□□□□ -1.67
FAM3A-218ENST00000475657 SYNE1Q8NF91 8797 aaKnown RBP4.61□□□□□ -1.67
FAM3A-218ENST00000475657 KRTAP19-4Q3LI73 84 aa4.58□□□□□ -1.68
FAM3A-218ENST00000475657 KRTAP5-8O75690 187 aa4.49□□□□□ -1.69
FAM3A-218ENST00000475657 LCE3CQ5T5A8 94 aa4.45□□□□□ -1.7
FAM3A-218ENST00000475657 LOC100996750A0A140TA64 210 aa4.44□□□□□ -1.7
FAM3A-218ENST00000475657 KRTAP5-2Q701N4 177 aa4.41□□□□□ -1.7
FAM3A-218ENST00000475657 OBSCNQ5VST9 7968 aa4.35□□□□□ -1.71
FAM3A-218ENST00000475657 KRTAP9-9Q9BYP9 154 aa4.35□□□□□ -1.71
FAM3A-218ENST00000475657 H3BS24 57 aa4.3□□□□□ -1.72
FAM3A-218ENST00000475657 KRTAP9-6A8MVA2 160 aa4.17□□□□□ -1.74
FAM3A-218ENST00000475657 MT1AP04731 61 aa4.14□□□□□ -1.75
FAM3A-218ENST00000475657 KRTAP6-1Q3LI64 71 aa4.13□□□□□ -1.75
FAM3A-218ENST00000475657 KRTAP9-4Q9BYQ2 154 aa4.11□□□□□ -1.75
FAM3A-218ENST00000475657 KRTAP6-2Q3LI66 62 aa4.07□□□□□ -1.76
FAM3A-218ENST00000475657 KRTAP5-1Q6L8H4 278 aa4.06□□□□□ -1.76
FAM3A-218ENST00000475657 LUZP6Q538Z0 58 aa3.92□□□□□ -1.78
FAM3A-218ENST00000475657 NDUFAF8A1L188 74 aa3.86□□□□□ -1.79
FAM3A-218ENST00000475657 MT3P25713 68 aa3.83□□□□□ -1.8
FAM3A-218ENST00000475657 LCE1EQ5T753 118 aa3.7□□□□□ -1.82
FAM3A-218ENST00000475657 A0A0A0MQY5 61 aa3.62□□□□□ -1.83
FAM3A-218ENST00000475657 KRTAP4-2Q9BYR5 136 aa3.52□□□□□ -1.85
FAM3A-218ENST00000475657 LCE1BQ5T7P3 118 aa3.45□□□□□ -1.86
FAM3A-218ENST00000475657 LCE1CQ5T751 118 aa3.42□□□□□ -1.86
FAM3A-218ENST00000475657 KRTAP4-12Q9BQ66 201 aa3.36□□□□□ -1.87
FAM3A-218ENST00000475657 INE1O15225 51 aa3.3□□□□□ -1.88
FAM3A-218ENST00000475657 LCE3DQ9BYE3 92 aa3.3□□□□□ -1.88
FAM3A-218ENST00000475657 KRTAP5-11Q6L8G4 156 aa3.28□□□□□ -1.88
FAM3A-218ENST00000475657 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
FAM3A-218ENST00000475657 PHGR1C9JFL3 82 aa3.18□□□□□ -1.9
FAM3A-218ENST00000475657 LCE3EQ5T5B0 92 aa3.18□□□□□ -1.9
FAM3A-218ENST00000475657 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.05□□□□□ -1.92
FAM3A-218ENST00000475657 KRTAP21-2Q3LI59 83 aa2.75□□□□□ -1.97
FAM3A-218ENST00000475657 MUC19Q7Z5P9 8384 aa2.73□□□□□ -1.97
FAM3A-218ENST00000475657 PRM1P04553 51 aa2.63□□□□□ -1.99
FAM3A-218ENST00000475657 KRTAP4-4Q9BYR3 166 aa2.59□□□□□ -1.99
FAM3A-218ENST00000475657 KRTAP21-1Q3LI58 79 aa2.45□□□□□ -2.02
FAM3A-218ENST00000475657 MUC16Q8WXI7 14507 aa1.85□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 41 ms