RNA–Protein interactions for RNA: ENST00000475288.5

PCGF3-209, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-209ENST00000475288 LCE4AQ5TA78 99 aa6.53□□□□□ -1.36
PCGF3-209ENST00000475288 A0A0D9SG42 100 aa6.52□□□□□ -1.37
PCGF3-209ENST00000475288 MT1GP13640 62 aa6.52□□□□□ -1.37
PCGF3-209ENST00000475288 KRTAP12-1P59990 96 aa6.49□□□□□ -1.37
PCGF3-209ENST00000475288 AHNAK2Q8IVF2 5795 aa6.48□□□□□ -1.37
PCGF3-209ENST00000475288 MT4P47944 62 aa6.47□□□□□ -1.37
PCGF3-209ENST00000475288 PP632Q6XCG6 107 aa6.47□□□□□ -1.37
PCGF3-209ENST00000475288 KRTAP19-5Q3LI72 72 aa6.41□□□□□ -1.38
PCGF3-209ENST00000475288 KRTAP5-10Q6L8G5 202 aa6.41□□□□□ -1.38
PCGF3-209ENST00000475288 K7ERS5 55 aa6.39□□□□□ -1.39
PCGF3-209ENST00000475288 SPINT4Q6UDR6 99 aa6.39□□□□□ -1.39
PCGF3-209ENST00000475288 MT1MQ8N339 61 aa6.38□□□□□ -1.39
PCGF3-209ENST00000475288 BRK1Q8WUW1 75 aa6.38□□□□□ -1.39
PCGF3-209ENST00000475288 KRTAP5-4Q6L8H1 288 aa6.36□□□□□ -1.39
PCGF3-209ENST00000475288 MT1LQ93083 61 aa6.3□□□□□ -1.4
PCGF3-209ENST00000475288 KRTAP5-7Q6L8G8 165 aa6.23□□□□□ -1.41
PCGF3-209ENST00000475288 KRTAP4-6Q9BYQ5 205 aa6.23□□□□□ -1.41
PCGF3-209ENST00000475288 PRO0628Q9UI54 55 aa6.21□□□□□ -1.42
PCGF3-209ENST00000475288 KRTAP4-3Q9BYR4 195 aa6.17□□□□□ -1.42
PCGF3-209ENST00000475288 C10orf95Q9H7T3 257 aa6.14□□□□□ -1.43
PCGF3-209ENST00000475288 KRTAP5-3Q6L8H2 238 aa6.13□□□□□ -1.43
PCGF3-209ENST00000475288 ROMO1P60602 79 aa6.08□□□□□ -1.44
PCGF3-209ENST00000475288 SPRR5A0A1B0GTR4 108 aa6.07□□□□□ -1.44
PCGF3-209ENST00000475288 LCE3AQ5TA76 89 aa6.07□□□□□ -1.44
PCGF3-209ENST00000475288 PMAIP1Q13794 54 aa6.05□□□□□ -1.44
PCGF3-209ENST00000475288 KRTAP25-1Q3LHN0 102 aa6.02□□□□□ -1.45
PCGF3-209ENST00000475288 TNP1P09430 55 aa6.01□□□□□ -1.45
PCGF3-209ENST00000475288 KRTAP20-2Q3LI61 65 aa5.99□□□□□ -1.45
PCGF3-209ENST00000475288 KRTAP5-5Q701N2 237 aaPredicted RBP5.93□□□□□ -1.46
PCGF3-209ENST00000475288 KRTAP4-7Q9BYR0 210 aa5.92□□□□□ -1.46
PCGF3-209ENST00000475288 KRTAP23-1A1A580 65 aa5.88□□□□□ -1.47
PCGF3-209ENST00000475288 KRTAP12-3P60328 96 aa5.86□□□□□ -1.47
PCGF3-209ENST00000475288 KRTAP12-4P60329 112 aa5.85□□□□□ -1.47
PCGF3-209ENST00000475288 KTN1-AS1Q86SY8 53 aa5.78□□□□□ -1.48
PCGF3-209ENST00000475288 SYNE1Q8NF91 8797 aaKnown RBP5.73□□□□□ -1.49
PCGF3-209ENST00000475288 LOC100996750A0A140TA64 210 aa5.63□□□□□ -1.51
PCGF3-209ENST00000475288 KRTAP19-4Q3LI73 84 aa5.63□□□□□ -1.51
PCGF3-209ENST00000475288 PRAC1Q96KF2 57 aa5.62□□□□□ -1.51
PCGF3-209ENST00000475288 KRTAP4-11Q9BYQ6 195 aa5.57□□□□□ -1.52
PCGF3-209ENST00000475288 AHNAKQ09666 5890 aaKnown RBP5.53□□□□□ -1.52
PCGF3-209ENST00000475288 KRTAP5-2Q701N4 177 aa5.51□□□□□ -1.53
PCGF3-209ENST00000475288 MUC5ACP98088 5654 aa5.47□□□□□ -1.53
PCGF3-209ENST00000475288 KRTAP15-1Q3LI76 137 aa5.42□□□□□ -1.54
PCGF3-209ENST00000475288 KRTAP5-8O75690 187 aa5.4□□□□□ -1.54
PCGF3-209ENST00000475288 MUC5BQ9HC84 5762 aaPredicted RBP5.38□□□□□ -1.55
PCGF3-209ENST00000475288 MT1AP04731 61 aa5.37□□□□□ -1.55
PCGF3-209ENST00000475288 LCE3CQ5T5A8 94 aa5.36□□□□□ -1.55
PCGF3-209ENST00000475288 SVIPQ8NHG7 77 aa5.35□□□□□ -1.55
PCGF3-209ENST00000475288 KRTAP6-1Q3LI64 71 aa5.34□□□□□ -1.55
PCGF3-209ENST00000475288 KRTAP9-4Q9BYQ2 154 aa5.23□□□□□ -1.57
PCGF3-209ENST00000475288 KRTAP9-9Q9BYP9 154 aa5.19□□□□□ -1.58
PCGF3-209ENST00000475288 KRTAP6-2Q3LI66 62 aa5.17□□□□□ -1.58
PCGF3-209ENST00000475288 OBSCNQ5VST9 7968 aa5.14□□□□□ -1.59
PCGF3-209ENST00000475288 KRTAP9-6A8MVA2 160 aa5.05□□□□□ -1.6
PCGF3-209ENST00000475288 KRTAP5-1Q6L8H4 278 aa4.99□□□□□ -1.61
PCGF3-209ENST00000475288 MT3P25713 68 aa4.93□□□□□ -1.62
PCGF3-209ENST00000475288 LUZP6Q538Z0 58 aa4.69□□□□□ -1.66
PCGF3-209ENST00000475288 LCE1EQ5T753 118 aa4.68□□□□□ -1.66
PCGF3-209ENST00000475288 KRTAP4-2Q9BYR5 136 aa4.41□□□□□ -1.7
PCGF3-209ENST00000475288 NDUFAF8A1L188 74 aa4.37□□□□□ -1.71
PCGF3-209ENST00000475288 LCE1CQ5T751 118 aa4.33□□□□□ -1.72
PCGF3-209ENST00000475288 LCE1BQ5T7P3 118 aa4.33□□□□□ -1.72
PCGF3-209ENST00000475288 KRTAP4-12Q9BQ66 201 aa4.13□□□□□ -1.75
PCGF3-209ENST00000475288 KRTAP5-11Q6L8G4 156 aa3.98□□□□□ -1.77
PCGF3-209ENST00000475288 LCE1FQ5T754 118 aa3.97□□□□□ -1.77
PCGF3-209ENST00000475288 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.92□□□□□ -1.78
PCGF3-209ENST00000475288 LCE3DQ9BYE3 92 aa3.86□□□□□ -1.79
PCGF3-209ENST00000475288 A0A0A0MQY5 61 aa3.84□□□□□ -1.79
PCGF3-209ENST00000475288 PHGR1C9JFL3 82 aa3.79□□□□□ -1.8
PCGF3-209ENST00000475288 LCE3EQ5T5B0 92 aa3.73□□□□□ -1.81
PCGF3-209ENST00000475288 INE1O15225 51 aa3.71□□□□□ -1.82
PCGF3-209ENST00000475288 KRTAP21-2Q3LI59 83 aa3.55□□□□□ -1.84
PCGF3-209ENST00000475288 H3BS24 57 aa3.41□□□□□ -1.86
PCGF3-209ENST00000475288 KRTAP4-4Q9BYR3 166 aa3.22□□□□□ -1.89
PCGF3-209ENST00000475288 MUC19Q7Z5P9 8384 aa3.21□□□□□ -1.9
PCGF3-209ENST00000475288 PRM1P04553 51 aa3.11□□□□□ -1.91
PCGF3-209ENST00000475288 KRTAP21-1Q3LI58 79 aa2.87□□□□□ -1.95
PCGF3-209ENST00000475288 MUC16Q8WXI7 14507 aa2.39□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 7.8 ms