RNA–Protein interactions for RNA: ENST00000475163.5

TSPAN1-206, Transcript of tetraspanin 1, humanhuman

TSL 5

Gene TSPAN1, Length 917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-206ENST00000475163 CDC42SE1Q9NRR8 79 aa4.03□□□□□ -1.76
TSPAN1-206ENST00000475163 MDN1Q9NU22 5596 aa4.03□□□□□ -1.76
TSPAN1-206ENST00000475163 C10orf95Q9H7T3 257 aa4.02□□□□□ -1.77
TSPAN1-206ENST00000475163 KMT2DO14686 5537 aa4.02□□□□□ -1.77
TSPAN1-206ENST00000475163 KRTAP8-1Q8IUC2 63 aa3.99□□□□□ -1.77
TSPAN1-206ENST00000475163 TNP1P09430 55 aa3.98□□□□□ -1.77
TSPAN1-206ENST00000475163 KRTAP5-9P26371 169 aa3.96□□□□□ -1.78
TSPAN1-206ENST00000475163 SPRR2FQ96RM1 72 aa3.93□□□□□ -1.78
TSPAN1-206ENST00000475163 SPRR2EP22531 72 aa3.91□□□□□ -1.78
TSPAN1-206ENST00000475163 SPRR2BP35325 72 aa3.91□□□□□ -1.78
TSPAN1-206ENST00000475163 SPRR2AP35326 72 aa3.91□□□□□ -1.78
TSPAN1-206ENST00000475163 BRK1Q8WUW1 75 aa3.89□□□□□ -1.79
TSPAN1-206ENST00000475163 KRTAP25-1Q3LHN0 102 aa3.88□□□□□ -1.79
TSPAN1-206ENST00000475163 PRO0628Q9UI54 55 aa3.88□□□□□ -1.79
TSPAN1-206ENST00000475163 ROMO1P60602 79 aa3.86□□□□□ -1.79
TSPAN1-206ENST00000475163 NDUFAF8A1L188 74 aa3.85□□□□□ -1.79
TSPAN1-206ENST00000475163 LCE3AQ5TA76 89 aa3.85□□□□□ -1.79
TSPAN1-206ENST00000475163 KRTAP2-3P0C7H8 128 aa3.84□□□□□ -1.79
TSPAN1-206ENST00000475163 LCE1AQ5T7P2 110 aa3.84□□□□□ -1.79
TSPAN1-206ENST00000475163 KRTAP2-4Q9BYR9 128 aa3.84□□□□□ -1.79
TSPAN1-206ENST00000475163 KRTAP19-7Q3SYF9 63 aa3.8□□□□□ -1.8
TSPAN1-206ENST00000475163 KRTAP19-5Q3LI72 72 aa3.79□□□□□ -1.8
TSPAN1-206ENST00000475163 MT1EP04732 61 aa3.77□□□□□ -1.81
TSPAN1-206ENST00000475163 SPRR2DP22532 72 aa3.77□□□□□ -1.81
TSPAN1-206ENST00000475163 MT3P25713 68 aa3.75□□□□□ -1.81
TSPAN1-206ENST00000475163 KRTAP2-2Q9BYT5 123 aa3.71□□□□□ -1.82
TSPAN1-206ENST00000475163 KRTAP2-1Q9BYU5 128 aa3.71□□□□□ -1.82
TSPAN1-206ENST00000475163 KRTAP12-3P60328 96 aa3.7□□□□□ -1.82
TSPAN1-206ENST00000475163 PP632Q6XCG6 107 aa3.69□□□□□ -1.82
TSPAN1-206ENST00000475163 KRTAP19-3Q7Z4W3 81 aa3.69□□□□□ -1.82
TSPAN1-206ENST00000475163 PMAIP1Q13794 54 aa3.67□□□□□ -1.82
TSPAN1-206ENST00000475163 MT1LQ93083 61 aa3.64□□□□□ -1.83
TSPAN1-206ENST00000475163 MT1GP13640 62 aa3.63□□□□□ -1.83
TSPAN1-206ENST00000475163 GPR98Q8WXG9 6306 aa3.57□□□□□ -1.84
TSPAN1-206ENST00000475163 MT1MQ8N339 61 aa3.56□□□□□ -1.84
TSPAN1-206ENST00000475163 DSTQ03001 7570 aaKnown RBP3.53□□□□□ -1.84
TSPAN1-206ENST00000475163 KTN1-AS1Q86SY8 53 aa3.53□□□□□ -1.84
TSPAN1-206ENST00000475163 KRTAP4-3Q9BYR4 195 aa3.47□□□□□ -1.85
TSPAN1-206ENST00000475163 LCE3CQ5T5A8 94 aa3.44□□□□□ -1.86
TSPAN1-206ENST00000475163 MT4P47944 62 aa3.35□□□□□ -1.87
TSPAN1-206ENST00000475163 LCE1FQ5T754 118 aa3.34□□□□□ -1.87
TSPAN1-206ENST00000475163 KRTAP5-11Q6L8G4 156 aa3.32□□□□□ -1.88
TSPAN1-206ENST00000475163 HMCN1Q96RW7 5635 aa3.31□□□□□ -1.88
TSPAN1-206ENST00000475163 AHNAK2Q8IVF2 5795 aa3.27□□□□□ -1.89
TSPAN1-206ENST00000475163 KRTAP5-4Q6L8H1 288 aa3.23□□□□□ -1.89
TSPAN1-206ENST00000475163 KRTAP5-5Q701N2 237 aaPredicted RBP3.23□□□□□ -1.89
TSPAN1-206ENST00000475163 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.22□□□□□ -1.89
TSPAN1-206ENST00000475163 KRTAP9-6A8MVA2 160 aa3.21□□□□□ -1.9
TSPAN1-206ENST00000475163 LCE1EQ5T753 118 aa3.17□□□□□ -1.9
TSPAN1-206ENST00000475163 SPRR5A0A1B0GTR4 108 aa3.11□□□□□ -1.91
TSPAN1-206ENST00000475163 MT1AP04731 61 aa3.11□□□□□ -1.91
TSPAN1-206ENST00000475163 KRTAP12-4P60329 112 aa3.11□□□□□ -1.91
TSPAN1-206ENST00000475163 KRTAP5-10Q6L8G5 202 aa3.11□□□□□ -1.91
TSPAN1-206ENST00000475163 KRTAP6-1Q3LI64 71 aa3.07□□□□□ -1.92
TSPAN1-206ENST00000475163 KRTAP20-2Q3LI61 65 aa3.03□□□□□ -1.92
TSPAN1-206ENST00000475163 SYNE1Q8NF91 8797 aaKnown RBP3.03□□□□□ -1.93
TSPAN1-206ENST00000475163 KRTAP5-7Q6L8G8 165 aa3.01□□□□□ -1.93
TSPAN1-206ENST00000475163 LUZP6Q538Z0 58 aa2.98□□□□□ -1.93
TSPAN1-206ENST00000475163 KRTAP6-2Q3LI66 62 aa2.88□□□□□ -1.95
TSPAN1-206ENST00000475163 KRTAP5-2Q701N4 177 aa2.87□□□□□ -1.95
TSPAN1-206ENST00000475163 KRTAP5-1Q6L8H4 278 aa2.83□□□□□ -1.96
TSPAN1-206ENST00000475163 LCE3EQ5T5B0 92 aa2.8□□□□□ -1.96
TSPAN1-206ENST00000475163 OBSCNQ5VST9 7968 aa2.74□□□□□ -1.97
TSPAN1-206ENST00000475163 KRTAP4-4Q9BYR3 166 aa2.72□□□□□ -1.97
TSPAN1-206ENST00000475163 AHNAKQ09666 5890 aaKnown RBP2.71□□□□□ -1.98
TSPAN1-206ENST00000475163 MUC5ACP98088 5654 aa2.69□□□□□ -1.98
TSPAN1-206ENST00000475163 KRTAP5-8O75690 187 aa2.69□□□□□ -1.98
TSPAN1-206ENST00000475163 MUC5BQ9HC84 5762 aaPredicted RBP2.67□□□□□ -1.98
TSPAN1-206ENST00000475163 LCE3DQ9BYE3 92 aa2.54□□□□□ -2
TSPAN1-206ENST00000475163 INE1O15225 51 aa2.42□□□□□ -2.02
TSPAN1-206ENST00000475163 LCE1BQ5T7P3 118 aa2.38□□□□□ -2.03
TSPAN1-206ENST00000475163 LCE1CQ5T751 118 aa2.34□□□□□ -2.03
TSPAN1-206ENST00000475163 KRTAP21-2Q3LI59 83 aa2.01□□□□□ -2.09
TSPAN1-206ENST00000475163 PRM1P04553 51 aa1.99□□□□□ -2.09
TSPAN1-206ENST00000475163 PHGR1C9JFL3 82 aa1.87□□□□□ -2.11
TSPAN1-206ENST00000475163 MUC19Q7Z5P9 8384 aa1.8□□□□□ -2.12
TSPAN1-206ENST00000475163 KRTAP21-1Q3LI58 79 aa1.37□□□□□ -2.19
TSPAN1-206ENST00000475163 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 65.7 ms