RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 MT1EP04732 61 aa5.83□□□□□ -1.48
SRRT-209ENST00000474896 CDC42SE1Q9NRR8 79 aa5.81□□□□□ -1.48
SRRT-209ENST00000474896 C10orf95Q9H7T3 257 aa5.8□□□□□ -1.48
SRRT-209ENST00000474896 LCE1DQ5T752 114 aa5.77□□□□□ -1.49
SRRT-209ENST00000474896 TNP1P09430 55 aa5.71□□□□□ -1.5
SRRT-209ENST00000474896 MT1GP13640 62 aa5.68□□□□□ -1.5
SRRT-209ENST00000474896 MT4P47944 62 aa5.68□□□□□ -1.5
SRRT-209ENST00000474896 LCE4AQ5TA78 99 aa5.67□□□□□ -1.5
SRRT-209ENST00000474896 KRTAP19-5Q3LI72 72 aa5.65□□□□□ -1.5
SRRT-209ENST00000474896 PP632Q6XCG6 107 aa5.62□□□□□ -1.51
SRRT-209ENST00000474896 BRK1Q8WUW1 75 aa5.6□□□□□ -1.51
SRRT-209ENST00000474896 KRTAP25-1Q3LHN0 102 aa5.59□□□□□ -1.51
SRRT-209ENST00000474896 HMCN1Q96RW7 5635 aa5.58□□□□□ -1.52
SRRT-209ENST00000474896 MT1MQ8N339 61 aa5.57□□□□□ -1.52
SRRT-209ENST00000474896 LCE3AQ5TA76 89 aa5.56□□□□□ -1.52
SRRT-209ENST00000474896 ROMO1P60602 79 aa5.55□□□□□ -1.52
SRRT-209ENST00000474896 KRTAP5-10Q6L8G5 202 aa5.52□□□□□ -1.53
SRRT-209ENST00000474896 MT1LQ93083 61 aa5.52□□□□□ -1.53
SRRT-209ENST00000474896 KRTAP5-4Q6L8H1 288 aa5.5□□□□□ -1.53
SRRT-209ENST00000474896 AHNAK2Q8IVF2 5795 aa5.49□□□□□ -1.53
SRRT-209ENST00000474896 KRTAP4-6Q9BYQ5 205 aa5.49□□□□□ -1.53
SRRT-209ENST00000474896 KRTAP4-3Q9BYR4 195 aa5.49□□□□□ -1.53
SRRT-209ENST00000474896 KRTAP23-1A1A580 65 aa5.38□□□□□ -1.55
SRRT-209ENST00000474896 KRTAP5-7Q6L8G8 165 aa5.35□□□□□ -1.55
SRRT-209ENST00000474896 KRTAP12-3P60328 96 aa5.34□□□□□ -1.55
SRRT-209ENST00000474896 KRTAP5-3Q6L8H2 238 aa5.32□□□□□ -1.56
SRRT-209ENST00000474896 PMAIP1Q13794 54 aa5.27□□□□□ -1.57
SRRT-209ENST00000474896 KRTAP4-7Q9BYR0 210 aa5.26□□□□□ -1.57
SRRT-209ENST00000474896 PRO0628Q9UI54 55 aa5.25□□□□□ -1.57
SRRT-209ENST00000474896 KRTAP20-2Q3LI61 65 aa5.22□□□□□ -1.57
SRRT-209ENST00000474896 SPRR5A0A1B0GTR4 108 aa5.15□□□□□ -1.59
SRRT-209ENST00000474896 KRTAP5-5Q701N2 237 aaPredicted RBP5.13□□□□□ -1.59
SRRT-209ENST00000474896 KRTAP15-1Q3LI76 137 aa5.12□□□□□ -1.59
SRRT-209ENST00000474896 KRTAP12-4P60329 112 aa5.11□□□□□ -1.59
SRRT-209ENST00000474896 KRTAP19-4Q3LI73 84 aa5.03□□□□□ -1.6
SRRT-209ENST00000474896 LOC100996750A0A140TA64 210 aa5.01□□□□□ -1.61
SRRT-209ENST00000474896 PRAC1Q96KF2 57 aa5□□□□□ -1.61
SRRT-209ENST00000474896 LCE3CQ5T5A8 94 aa4.95□□□□□ -1.62
SRRT-209ENST00000474896 KTN1-AS1Q86SY8 53 aa4.93□□□□□ -1.62
SRRT-209ENST00000474896 SYNE1Q8NF91 8797 aaKnown RBP4.93□□□□□ -1.62
SRRT-209ENST00000474896 KRTAP4-11Q9BYQ6 195 aa4.86□□□□□ -1.63
SRRT-209ENST00000474896 KRTAP5-2Q701N4 177 aa4.75□□□□□ -1.65
SRRT-209ENST00000474896 KRTAP5-8O75690 187 aa4.7□□□□□ -1.66
SRRT-209ENST00000474896 KRTAP6-1Q3LI64 71 aa4.69□□□□□ -1.66
SRRT-209ENST00000474896 MT1AP04731 61 aa4.68□□□□□ -1.66
SRRT-209ENST00000474896 SVIPQ8NHG7 77 aa4.68□□□□□ -1.66
SRRT-209ENST00000474896 KRTAP9-6A8MVA2 160 aa4.67□□□□□ -1.66
SRRT-209ENST00000474896 KRTAP9-4Q9BYQ2 154 aa4.59□□□□□ -1.67
SRRT-209ENST00000474896 MUC5ACP98088 5654 aa4.59□□□□□ -1.68
SRRT-209ENST00000474896 AHNAKQ09666 5890 aaKnown RBP4.56□□□□□ -1.68
SRRT-209ENST00000474896 MUC5BQ9HC84 5762 aaPredicted RBP4.56□□□□□ -1.68
SRRT-209ENST00000474896 KRTAP6-2Q3LI66 62 aa4.55□□□□□ -1.68
SRRT-209ENST00000474896 KRTAP9-9Q9BYP9 154 aa4.53□□□□□ -1.68
SRRT-209ENST00000474896 OBSCNQ5VST9 7968 aa4.45□□□□□ -1.7
SRRT-209ENST00000474896 KRTAP5-1Q6L8H4 278 aa4.34□□□□□ -1.71
SRRT-209ENST00000474896 MT3P25713 68 aa4.31□□□□□ -1.72
SRRT-209ENST00000474896 LUZP6Q538Z0 58 aa4.14□□□□□ -1.75
SRRT-209ENST00000474896 KRTAP4-12Q9BQ66 201 aa4.04□□□□□ -1.76
SRRT-209ENST00000474896 LCE1EQ5T753 118 aa4.03□□□□□ -1.76
SRRT-209ENST00000474896 LCE1BQ5T7P3 118 aa3.85□□□□□ -1.79
SRRT-209ENST00000474896 KRTAP4-2Q9BYR5 136 aa3.84□□□□□ -1.79
SRRT-209ENST00000474896 H3BS24 57 aa3.79□□□□□ -1.8
SRRT-209ENST00000474896 NDUFAF8A1L188 74 aa3.74□□□□□ -1.81
SRRT-209ENST00000474896 LCE1CQ5T751 118 aa3.74□□□□□ -1.81
SRRT-209ENST00000474896 LCE3DQ9BYE3 92 aa3.64□□□□□ -1.83
SRRT-209ENST00000474896 LCE3EQ5T5B0 92 aa3.5□□□□□ -1.85
SRRT-209ENST00000474896 KRTAP5-11Q6L8G4 156 aa3.41□□□□□ -1.86
SRRT-209ENST00000474896 LCE1FQ5T754 118 aa3.4□□□□□ -1.87
SRRT-209ENST00000474896 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.34□□□□□ -1.87
SRRT-209ENST00000474896 PHGR1C9JFL3 82 aa3.24□□□□□ -1.89
SRRT-209ENST00000474896 A0A0A0MQY5 61 aa3.16□□□□□ -1.9
SRRT-209ENST00000474896 KRTAP21-2Q3LI59 83 aa3.09□□□□□ -1.91
SRRT-209ENST00000474896 INE1O15225 51 aa3.07□□□□□ -1.92
SRRT-209ENST00000474896 KRTAP4-4Q9BYR3 166 aa2.91□□□□□ -1.94
SRRT-209ENST00000474896 PRM1P04553 51 aa2.86□□□□□ -1.95
SRRT-209ENST00000474896 MUC19Q7Z5P9 8384 aa2.76□□□□□ -1.97
SRRT-209ENST00000474896 KRTAP21-1Q3LI58 79 aa2.46□□□□□ -2.02
SRRT-209ENST00000474896 MUC16Q8WXI7 14507 aa1.97□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 71.1 ms