RNA–Protein interactions for RNA: ENST00000474851.1

LSAMP-203, Transcript of limbic system associated membrane protein, humanhuman

TSL 5

Gene LSAMP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-203ENST00000474851 KRTAP12-2P59991 146 aa3.1□□□□□ -1.91
LSAMP-203ENST00000474851 KRTAP10-7P60409 375 aaPredicted RBP3.09□□□□□ -1.91
LSAMP-203ENST00000474851 CAMK2N1Q7Z7J9 78 aa3.07□□□□□ -1.92
LSAMP-203ENST00000474851 A0A0D9SG42 100 aa3.06□□□□□ -1.92
LSAMP-203ENST00000474851 MUC12Q9UKN1 5478 aa3.06□□□□□ -1.92
LSAMP-203ENST00000474851 M0QZ58 72 aa3.03□□□□□ -1.92
LSAMP-203ENST00000474851 KRTAP5-9P26371 169 aa3.03□□□□□ -1.92
LSAMP-203ENST00000474851 MT1XP80297 61 aa3.03□□□□□ -1.92
LSAMP-203ENST00000474851 PLAC4Q8WY50 150 aa3.02□□□□□ -1.93
LSAMP-203ENST00000474851 KMT2DO14686 5537 aa3.02□□□□□ -1.93
LSAMP-203ENST00000474851 NEBP20929 6669 aa3.02□□□□□ -1.93
LSAMP-203ENST00000474851 R4GN34 69 aa3□□□□□ -1.93
LSAMP-203ENST00000474851 PRO2289Q9P1D8 64 aa2.97□□□□□ -1.93
LSAMP-203ENST00000474851 MT3P25713 68 aa2.96□□□□□ -1.94
LSAMP-203ENST00000474851 MDN1Q9NU22 5596 aa2.96□□□□□ -1.94
LSAMP-203ENST00000474851 SPRR5A0A1B0GTR4 108 aa2.94□□□□□ -1.94
LSAMP-203ENST00000474851 PP632Q6XCG6 107 aa2.94□□□□□ -1.94
LSAMP-203ENST00000474851 KRTAP20-1Q3LI63 56 aa2.9□□□□□ -1.95
LSAMP-203ENST00000474851 SPRR2FQ96RM1 72 aa2.9□□□□□ -1.95
LSAMP-203ENST00000474851 KRTAP8-1Q8IUC2 63 aa2.89□□□□□ -1.95
LSAMP-203ENST00000474851 KRTAP10-12P60413 245 aa2.88□□□□□ -1.95
LSAMP-203ENST00000474851 SPRR2EP22531 72 aa2.85□□□□□ -1.95
LSAMP-203ENST00000474851 SPRR2BP35325 72 aa2.85□□□□□ -1.95
LSAMP-203ENST00000474851 SPRR2AP35326 72 aa2.85□□□□□ -1.95
LSAMP-203ENST00000474851 KRTAP2-3P0C7H8 128 aa2.84□□□□□ -1.95
LSAMP-203ENST00000474851 KRTAP2-4Q9BYR9 128 aa2.84□□□□□ -1.95
LSAMP-203ENST00000474851 KRTAP2-2Q9BYT5 123 aa2.83□□□□□ -1.96
LSAMP-203ENST00000474851 KRTAP5-1Q6L8H4 278 aa2.82□□□□□ -1.96
LSAMP-203ENST00000474851 LCE1EQ5T753 118 aa2.8□□□□□ -1.96
LSAMP-203ENST00000474851 INE1O15225 51 aa2.77□□□□□ -1.97
LSAMP-203ENST00000474851 SPRR2DP22532 72 aa2.75□□□□□ -1.97
LSAMP-203ENST00000474851 KRTAP2-1Q9BYU5 128 aa2.75□□□□□ -1.97
LSAMP-203ENST00000474851 KRTAP4-4Q9BYR3 166 aa2.74□□□□□ -1.97
LSAMP-203ENST00000474851 KRTAP19-7Q3SYF9 63 aa2.72□□□□□ -1.97
LSAMP-203ENST00000474851 KRTAP5-4Q6L8H1 288 aa2.72□□□□□ -1.97
LSAMP-203ENST00000474851 MT1EP04732 61 aa2.68□□□□□ -1.98
LSAMP-203ENST00000474851 TNP1P09430 55 aa2.65□□□□□ -1.99
LSAMP-203ENST00000474851 LCE1FQ5T754 118 aa2.64□□□□□ -1.99
LSAMP-203ENST00000474851 KRTAP19-3Q7Z4W3 81 aa2.64□□□□□ -1.99
LSAMP-203ENST00000474851 KRTAP19-5Q3LI72 72 aa2.63□□□□□ -1.99
LSAMP-203ENST00000474851 MT1GP13640 62 aa2.59□□□□□ -1.99
LSAMP-203ENST00000474851 DSTQ03001 7570 aaKnown RBP2.57□□□□□ -2
LSAMP-203ENST00000474851 LCE3AQ5TA76 89 aa2.56□□□□□ -2
LSAMP-203ENST00000474851 MT1LQ93083 61 aa2.56□□□□□ -2
LSAMP-203ENST00000474851 MT1MQ8N339 61 aa2.54□□□□□ -2
LSAMP-203ENST00000474851 KRTAP4-3Q9BYR4 195 aa2.5□□□□□ -2.01
LSAMP-203ENST00000474851 OBSCNQ5VST9 7968 aa2.47□□□□□ -2.01
LSAMP-203ENST00000474851 KRTAP12-3P60328 96 aa2.46□□□□□ -2.02
LSAMP-203ENST00000474851 KRTAP9-6A8MVA2 160 aa2.44□□□□□ -2.02
LSAMP-203ENST00000474851 HMCN1Q96RW7 5635 aa2.43□□□□□ -2.02
LSAMP-203ENST00000474851 GPR98Q8WXG9 6306 aa2.43□□□□□ -2.02
LSAMP-203ENST00000474851 MT4P47944 62 aa2.41□□□□□ -2.02
LSAMP-203ENST00000474851 LCE3CQ5T5A8 94 aa2.41□□□□□ -2.02
LSAMP-203ENST00000474851 KRTAP5-5Q701N2 237 aaPredicted RBP2.36□□□□□ -2.03
LSAMP-203ENST00000474851 KRTAP5-2Q701N4 177 aa2.34□□□□□ -2.03
LSAMP-203ENST00000474851 KRTAP5-10Q6L8G5 202 aa2.3□□□□□ -2.04
LSAMP-203ENST00000474851 AHNAK2Q8IVF2 5795 aa2.3□□□□□ -2.04
LSAMP-203ENST00000474851 KRTAP20-2Q3LI61 65 aa2.29□□□□□ -2.04
LSAMP-203ENST00000474851 SYNE1Q8NF91 8797 aaKnown RBP2.28□□□□□ -2.04
LSAMP-203ENST00000474851 KRTAP12-4P60329 112 aa2.25□□□□□ -2.05
LSAMP-203ENST00000474851 KRTAP5-7Q6L8G8 165 aa2.2□□□□□ -2.06
LSAMP-203ENST00000474851 LCE3EQ5T5B0 92 aa2.19□□□□□ -2.06
LSAMP-203ENST00000474851 KRTAP6-1Q3LI64 71 aa2.17□□□□□ -2.06
LSAMP-203ENST00000474851 MT1AP04731 61 aa2.16□□□□□ -2.06
LSAMP-203ENST00000474851 KRTAP6-2Q3LI66 62 aa2.07□□□□□ -2.08
LSAMP-203ENST00000474851 KRTAP5-8O75690 187 aa2.03□□□□□ -2.08
LSAMP-203ENST00000474851 MUC5BQ9HC84 5762 aaPredicted RBP1.92□□□□□ -2.1
LSAMP-203ENST00000474851 MUC5ACP98088 5654 aa1.89□□□□□ -2.11
LSAMP-203ENST00000474851 AHNAKQ09666 5890 aaKnown RBP1.89□□□□□ -2.11
LSAMP-203ENST00000474851 LCE3DQ9BYE3 92 aa1.85□□□□□ -2.11
LSAMP-203ENST00000474851 LCE1CQ5T751 118 aa1.79□□□□□ -2.12
LSAMP-203ENST00000474851 LCE1BQ5T7P3 118 aa1.79□□□□□ -2.12
LSAMP-203ENST00000474851 PRM1P04553 51 aa1.78□□□□□ -2.12
LSAMP-203ENST00000474851 MUC19Q7Z5P9 8384 aa1.61□□□□□ -2.15
LSAMP-203ENST00000474851 KRTAP21-2Q3LI59 83 aa1.44□□□□□ -2.18
LSAMP-203ENST00000474851 PHGR1C9JFL3 82 aa1.33□□□□□ -2.2
LSAMP-203ENST00000474851 KRTAP21-1Q3LI58 79 aa1.26□□□□□ -2.21
LSAMP-203ENST00000474851 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 241.7 ms