RNA–Protein interactions for RNA: ENST00000474684.1

CPSF7-210, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-210ENST00000474684 MDN1Q9NU22 5596 aa2.6□□□□□ -1.99
CPSF7-210ENST00000474684 ADM2Q7Z4H4 148 aa2.6□□□□□ -1.99
CPSF7-210ENST00000474684 KRTAP9-6A8MVA2 160 aa2.57□□□□□ -2
CPSF7-210ENST00000474684 A0A1B0GU33 70 aa2.55□□□□□ -2
CPSF7-210ENST00000474684 OBSCNQ5VST9 7968 aa2.54□□□□□ -2
CPSF7-210ENST00000474684 KRTAP20-1Q3LI63 56 aa2.54□□□□□ -2
CPSF7-210ENST00000474684 MT1XP80297 61 aa2.51□□□□□ -2.01
CPSF7-210ENST00000474684 CRIPTQ9P021 101 aa2.51□□□□□ -2.01
CPSF7-210ENST00000474684 H0YAA0 97 aa2.5□□□□□ -2.01
CPSF7-210ENST00000474684 CAMK2N1Q7Z7J9 78 aa2.49□□□□□ -2.01
CPSF7-210ENST00000474684 KRTAP4-3Q9BYR4 195 aa2.49□□□□□ -2.01
CPSF7-210ENST00000474684 SPINT4Q6UDR6 99 aa2.48□□□□□ -2.01
CPSF7-210ENST00000474684 SPRR2FQ96RM1 72 aa2.48□□□□□ -2.01
CPSF7-210ENST00000474684 P0C880 135 aa2.47□□□□□ -2.01
CPSF7-210ENST00000474684 SPRR2EP22531 72 aa2.46□□□□□ -2.02
CPSF7-210ENST00000474684 SPRR2BP35325 72 aa2.46□□□□□ -2.02
CPSF7-210ENST00000474684 SPRR2AP35326 72 aa2.46□□□□□ -2.02
CPSF7-210ENST00000474684 KRTAP5-2Q701N4 177 aa2.43□□□□□ -2.02
CPSF7-210ENST00000474684 KRTAP8-1Q8IUC2 63 aa2.43□□□□□ -2.02
CPSF7-210ENST00000474684 M0QZ58 72 aa2.42□□□□□ -2.02
CPSF7-210ENST00000474684 KRTAP2-3P0C7H8 128 aa2.42□□□□□ -2.02
CPSF7-210ENST00000474684 KRTAP12-2P59991 146 aa2.42□□□□□ -2.02
CPSF7-210ENST00000474684 KRTAP2-4Q9BYR9 128 aa2.42□□□□□ -2.02
CPSF7-210ENST00000474684 PRO2289Q9P1D8 64 aa2.42□□□□□ -2.02
CPSF7-210ENST00000474684 R4GN34 69 aa2.41□□□□□ -2.02
CPSF7-210ENST00000474684 LUZP6Q538Z0 58 aa2.4□□□□□ -2.03
CPSF7-210ENST00000474684 PLAC4Q8WY50 150 aa2.4□□□□□ -2.03
CPSF7-210ENST00000474684 NDUFAF8A1L188 74 aa2.39□□□□□ -2.03
CPSF7-210ENST00000474684 KRTAP10-12P60413 245 aa2.38□□□□□ -2.03
CPSF7-210ENST00000474684 SPRR2DP22532 72 aa2.37□□□□□ -2.03
CPSF7-210ENST00000474684 KRTAP2-1Q9BYU5 128 aa2.34□□□□□ -2.03
CPSF7-210ENST00000474684 PP632Q6XCG6 107 aa2.32□□□□□ -2.04
CPSF7-210ENST00000474684 KRTAP13-4Q3LI77 160 aa2.3□□□□□ -2.04
CPSF7-210ENST00000474684 GPR98Q8WXG9 6306 aa2.28□□□□□ -2.04
CPSF7-210ENST00000474684 A0A0D9SG42 100 aa2.25□□□□□ -2.05
CPSF7-210ENST00000474684 KRTAP19-7Q3SYF9 63 aa2.25□□□□□ -2.05
CPSF7-210ENST00000474684 KRTAP12-1P59990 96 aa2.24□□□□□ -2.05
CPSF7-210ENST00000474684 DSTQ03001 7570 aaKnown RBP2.24□□□□□ -2.05
CPSF7-210ENST00000474684 MT1EP04732 61 aa2.23□□□□□ -2.05
CPSF7-210ENST00000474684 C10orf95Q9H7T3 257 aa2.22□□□□□ -2.05
CPSF7-210ENST00000474684 KRTAP19-3Q7Z4W3 81 aa2.2□□□□□ -2.06
CPSF7-210ENST00000474684 LCE3AQ5TA76 89 aa2.17□□□□□ -2.06
CPSF7-210ENST00000474684 AHNAK2Q8IVF2 5795 aa2.16□□□□□ -2.06
CPSF7-210ENST00000474684 KRTAP19-5Q3LI72 72 aa2.16□□□□□ -2.06
CPSF7-210ENST00000474684 INE1O15225 51 aa2.15□□□□□ -2.07
CPSF7-210ENST00000474684 HMCN1Q96RW7 5635 aa2.15□□□□□ -2.07
CPSF7-210ENST00000474684 MT1MQ8N339 61 aa2.13□□□□□ -2.07
CPSF7-210ENST00000474684 SPRR5A0A1B0GTR4 108 aa2.11□□□□□ -2.07
CPSF7-210ENST00000474684 LCE1FQ5T754 118 aa2.11□□□□□ -2.07
CPSF7-210ENST00000474684 MT1LQ93083 61 aa2.11□□□□□ -2.07
CPSF7-210ENST00000474684 KRTAP5-8O75690 187 aa2.1□□□□□ -2.07
CPSF7-210ENST00000474684 MT1GP13640 62 aa2.1□□□□□ -2.07
CPSF7-210ENST00000474684 MT4P47944 62 aa2.1□□□□□ -2.07
CPSF7-210ENST00000474684 TNP1P09430 55 aa2.09□□□□□ -2.07
CPSF7-210ENST00000474684 LCE3CQ5T5A8 94 aa2.03□□□□□ -2.08
CPSF7-210ENST00000474684 KRTAP5-10Q6L8G5 202 aa2.02□□□□□ -2.09
CPSF7-210ENST00000474684 SYNE1Q8NF91 8797 aaKnown RBP2□□□□□ -2.09
CPSF7-210ENST00000474684 KRTAP5-5Q701N2 237 aaPredicted RBP1.99□□□□□ -2.09
CPSF7-210ENST00000474684 KRTAP12-3P60328 96 aa1.97□□□□□ -2.09
CPSF7-210ENST00000474684 LCE1CQ5T751 118 aa1.97□□□□□ -2.09
CPSF7-210ENST00000474684 LCE1BQ5T7P3 118 aa1.97□□□□□ -2.09
CPSF7-210ENST00000474684 KRTAP20-2Q3LI61 65 aa1.95□□□□□ -2.1
CPSF7-210ENST00000474684 KRTAP5-7Q6L8G8 165 aa1.92□□□□□ -2.1
CPSF7-210ENST00000474684 KRTAP12-4P60329 112 aa1.85□□□□□ -2.11
CPSF7-210ENST00000474684 LCE3EQ5T5B0 92 aa1.82□□□□□ -2.12
CPSF7-210ENST00000474684 KRTAP6-1Q3LI64 71 aa1.81□□□□□ -2.12
CPSF7-210ENST00000474684 MT1AP04731 61 aa1.79□□□□□ -2.12
CPSF7-210ENST00000474684 AHNAKQ09666 5890 aaKnown RBP1.78□□□□□ -2.12
CPSF7-210ENST00000474684 MUC5BQ9HC84 5762 aaPredicted RBP1.75□□□□□ -2.13
CPSF7-210ENST00000474684 MUC5ACP98088 5654 aa1.73□□□□□ -2.13
CPSF7-210ENST00000474684 KRTAP6-2Q3LI66 62 aa1.72□□□□□ -2.13
CPSF7-210ENST00000474684 MUC19Q7Z5P9 8384 aa1.67□□□□□ -2.14
CPSF7-210ENST00000474684 KRTAP21-2Q3LI59 83 aa1.41□□□□□ -2.18
CPSF7-210ENST00000474684 LCE3DQ9BYE3 92 aa1.33□□□□□ -2.2
CPSF7-210ENST00000474684 PRM1P04553 51 aa1.28□□□□□ -2.2
CPSF7-210ENST00000474684 PHGR1C9JFL3 82 aa1.17□□□□□ -2.22
CPSF7-210ENST00000474684 KRTAP21-1Q3LI58 79 aa0.89□□□□□ -2.27
CPSF7-210ENST00000474684 MUC16Q8WXI7 14507 aa0.74□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 12 ms