RNA–Protein interactions for RNA: ENST00000474345.5

FDPS-210, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 3

Gene FDPS, Length 713 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-210ENST00000474345 LCE5AQ5TCM9 118 aa5.48□□□□□ -1.53
FDPS-210ENST00000474345 SVIPQ8NHG7 77 aa5.48□□□□□ -1.53
FDPS-210ENST00000474345 MT1GP13640 62 aa5.42□□□□□ -1.54
FDPS-210ENST00000474345 MT1LQ93083 61 aa5.41□□□□□ -1.54
FDPS-210ENST00000474345 KRTAP12-3P60328 96 aa5.4□□□□□ -1.54
FDPS-210ENST00000474345 ROMO1P60602 79 aa5.4□□□□□ -1.54
FDPS-210ENST00000474345 LCE3BQ5TA77 95 aa5.4□□□□□ -1.54
FDPS-210ENST00000474345 KRTAP2-2Q9BYT5 123 aa5.4□□□□□ -1.54
FDPS-210ENST00000474345 KRTAP2-1Q9BYU5 128 aa5.4□□□□□ -1.54
FDPS-210ENST00000474345 KRTAP23-1A1A580 65 aa5.36□□□□□ -1.55
FDPS-210ENST00000474345 PP632Q6XCG6 107 aa5.33□□□□□ -1.56
FDPS-210ENST00000474345 MT1MQ8N339 61 aa5.32□□□□□ -1.56
FDPS-210ENST00000474345 BRK1Q8WUW1 75 aa5.23□□□□□ -1.57
FDPS-210ENST00000474345 DSTQ03001 7570 aaKnown RBP5.23□□□□□ -1.57
FDPS-210ENST00000474345 KRTAP4-3Q9BYR4 195 aa5.22□□□□□ -1.57
FDPS-210ENST00000474345 KRTAP4-7Q9BYR0 210 aa5.2□□□□□ -1.58
FDPS-210ENST00000474345 KRTAP15-1Q3LI76 137 aa5.15□□□□□ -1.59
FDPS-210ENST00000474345 KRTAP19-4Q3LI73 84 aa5.12□□□□□ -1.59
FDPS-210ENST00000474345 LCE3CQ5T5A8 94 aa5.01□□□□□ -1.61
FDPS-210ENST00000474345 KRTAP4-9Q9BYQ8 210 aa4.98□□□□□ -1.61
FDPS-210ENST00000474345 PMAIP1Q13794 54 aa4.95□□□□□ -1.62
FDPS-210ENST00000474345 LCE4AQ5TA78 99 aa4.94□□□□□ -1.62
FDPS-210ENST00000474345 KRTAP5-4Q6L8H1 288 aa4.92□□□□□ -1.62
FDPS-210ENST00000474345 LOC100996750A0A140TA64 210 aa4.9□□□□□ -1.63
FDPS-210ENST00000474345 LCE1DQ5T752 114 aa4.86□□□□□ -1.63
FDPS-210ENST00000474345 KRTAP5-5Q701N2 237 aaPredicted RBP4.86□□□□□ -1.63
FDPS-210ENST00000474345 MT4P47944 62 aa4.85□□□□□ -1.63
FDPS-210ENST00000474345 PRO0628Q9UI54 55 aa4.8□□□□□ -1.64
FDPS-210ENST00000474345 KRTAP4-6Q9BYQ5 205 aa4.78□□□□□ -1.64
FDPS-210ENST00000474345 HMCN1Q96RW7 5635 aa4.76□□□□□ -1.65
FDPS-210ENST00000474345 KRTAP9-6A8MVA2 160 aa4.74□□□□□ -1.65
FDPS-210ENST00000474345 PRAC1Q96KF2 57 aa4.72□□□□□ -1.65
FDPS-210ENST00000474345 SYNE1Q8NF91 8797 aaKnown RBP4.69□□□□□ -1.66
FDPS-210ENST00000474345 KRTAP12-4P60329 112 aa4.65□□□□□ -1.67
FDPS-210ENST00000474345 SPRR5A0A1B0GTR4 108 aa4.62□□□□□ -1.67
FDPS-210ENST00000474345 KRTAP20-2Q3LI61 65 aa4.61□□□□□ -1.67
FDPS-210ENST00000474345 MT1AP04731 61 aa4.6□□□□□ -1.67
FDPS-210ENST00000474345 KRTAP6-1Q3LI64 71 aa4.58□□□□□ -1.68
FDPS-210ENST00000474345 GPR98Q8WXG9 6306 aa4.54□□□□□ -1.68
FDPS-210ENST00000474345 KTN1-AS1Q86SY8 53 aa4.51□□□□□ -1.69
FDPS-210ENST00000474345 AHNAK2Q8IVF2 5795 aa4.51□□□□□ -1.69
FDPS-210ENST00000474345 KRTAP5-3Q6L8H2 238 aa4.49□□□□□ -1.69
FDPS-210ENST00000474345 KRTAP9-4Q9BYQ2 154 aa4.46□□□□□ -1.7
FDPS-210ENST00000474345 H3BS24 57 aa4.4□□□□□ -1.71
FDPS-210ENST00000474345 KRTAP5-10Q6L8G5 202 aa4.38□□□□□ -1.71
FDPS-210ENST00000474345 KRTAP5-2Q701N4 177 aa4.36□□□□□ -1.71
FDPS-210ENST00000474345 KRTAP6-2Q3LI66 62 aa4.31□□□□□ -1.72
FDPS-210ENST00000474345 MT3P25713 68 aa4.2□□□□□ -1.74
FDPS-210ENST00000474345 KRTAP5-7Q6L8G8 165 aa4.16□□□□□ -1.74
FDPS-210ENST00000474345 KRTAP4-11Q9BYQ6 195 aa4.15□□□□□ -1.75
FDPS-210ENST00000474345 A0A0A0MQY5 61 aa4.11□□□□□ -1.75
FDPS-210ENST00000474345 KRTAP5-8O75690 187 aa4□□□□□ -1.77
FDPS-210ENST00000474345 OBSCNQ5VST9 7968 aa3.99□□□□□ -1.77
FDPS-210ENST00000474345 LUZP6Q538Z0 58 aa3.9□□□□□ -1.79
FDPS-210ENST00000474345 KRTAP5-1Q6L8H4 278 aa3.86□□□□□ -1.79
FDPS-210ENST00000474345 KRTAP4-12Q9BQ66 201 aa3.86□□□□□ -1.79
FDPS-210ENST00000474345 MUC5ACP98088 5654 aa3.79□□□□□ -1.8
FDPS-210ENST00000474345 LCE1EQ5T753 118 aa3.79□□□□□ -1.8
FDPS-210ENST00000474345 KRTAP9-9Q9BYP9 154 aa3.73□□□□□ -1.81
FDPS-210ENST00000474345 LCE3DQ9BYE3 92 aa3.67□□□□□ -1.82
FDPS-210ENST00000474345 MUC5BQ9HC84 5762 aaPredicted RBP3.65□□□□□ -1.83
FDPS-210ENST00000474345 AHNAKQ09666 5890 aaKnown RBP3.63□□□□□ -1.83
FDPS-210ENST00000474345 KRTAP4-2Q9BYR5 136 aa3.57□□□□□ -1.84
FDPS-210ENST00000474345 LCE1BQ5T7P3 118 aa3.55□□□□□ -1.84
FDPS-210ENST00000474345 LCE1CQ5T751 118 aa3.51□□□□□ -1.85
FDPS-210ENST00000474345 LCE3EQ5T5B0 92 aa3.5□□□□□ -1.85
FDPS-210ENST00000474345 NDUFAF8A1L188 74 aa3.4□□□□□ -1.87
FDPS-210ENST00000474345 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.24□□□□□ -1.89
FDPS-210ENST00000474345 KRTAP5-11Q6L8G4 156 aa3.14□□□□□ -1.91
FDPS-210ENST00000474345 KRTAP21-2Q3LI59 83 aa3.02□□□□□ -1.93
FDPS-210ENST00000474345 LCE1FQ5T754 118 aa3□□□□□ -1.93
FDPS-210ENST00000474345 PRM1P04553 51 aa2.78□□□□□ -1.96
FDPS-210ENST00000474345 INE1O15225 51 aa2.77□□□□□ -1.97
FDPS-210ENST00000474345 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
FDPS-210ENST00000474345 PHGR1C9JFL3 82 aa2.71□□□□□ -1.98
FDPS-210ENST00000474345 MUC19Q7Z5P9 8384 aa2.48□□□□□ -2.01
FDPS-210ENST00000474345 KRTAP21-1Q3LI58 79 aa1.9□□□□□ -2.11
FDPS-210ENST00000474345 MUC16Q8WXI7 14507 aa1.78□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 151.6 ms