RNA–Protein interactions for RNA: ENST00000474288.1

HUWE1-209, Transcript of HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene HUWE1, Length 1,254 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HUWE1-209ENST00000474288 KRTAP5-3Q6L8H2 238 aa4.09□□□□□ -1.75
HUWE1-209ENST00000474288 LCE3AQ5TA76 89 aa4.06□□□□□ -1.76
HUWE1-209ENST00000474288 KRTAP8-1Q8IUC2 63 aa4.03□□□□□ -1.76
HUWE1-209ENST00000474288 PP632Q6XCG6 107 aa4.02□□□□□ -1.77
HUWE1-209ENST00000474288 KTN1-AS1Q86SY8 53 aa4.01□□□□□ -1.77
HUWE1-209ENST00000474288 KRTAP5-9P26371 169 aa4□□□□□ -1.77
HUWE1-209ENST00000474288 SYNE2Q8WXH0 6885 aaKnown RBP3.99□□□□□ -1.77
HUWE1-209ENST00000474288 KRTAP19-7Q3SYF9 63 aa3.98□□□□□ -1.77
HUWE1-209ENST00000474288 KRTAP6-3Q3LI67 103 aa3.97□□□□□ -1.77
HUWE1-209ENST00000474288 A0A0A0MQY5 61 aa3.95□□□□□ -1.78
HUWE1-209ENST00000474288 MUC12Q9UKN1 5478 aa3.94□□□□□ -1.78
HUWE1-209ENST00000474288 KRTAP19-5Q3LI72 72 aa3.94□□□□□ -1.78
HUWE1-209ENST00000474288 PRAC1Q96KF2 57 aa3.93□□□□□ -1.78
HUWE1-209ENST00000474288 MDN1Q9NU22 5596 aa3.93□□□□□ -1.78
HUWE1-209ENST00000474288 MT1EP04732 61 aa3.91□□□□□ -1.78
HUWE1-209ENST00000474288 KRTAP12-3P60328 96 aa3.91□□□□□ -1.78
HUWE1-209ENST00000474288 SPRR2FQ96RM1 72 aa3.88□□□□□ -1.79
HUWE1-209ENST00000474288 KRTAP15-1Q3LI76 137 aa3.87□□□□□ -1.79
HUWE1-209ENST00000474288 MT1LQ93083 61 aa3.8□□□□□ -1.8
HUWE1-209ENST00000474288 LCE1AQ5T7P2 110 aa3.79□□□□□ -1.8
HUWE1-209ENST00000474288 KRTAP19-3Q7Z4W3 81 aa3.78□□□□□ -1.8
HUWE1-209ENST00000474288 NEBP20929 6669 aa3.76□□□□□ -1.81
HUWE1-209ENST00000474288 MT1GP13640 62 aa3.74□□□□□ -1.81
HUWE1-209ENST00000474288 SPRR2EP22531 72 aa3.72□□□□□ -1.81
HUWE1-209ENST00000474288 SPRR2BP35325 72 aa3.72□□□□□ -1.81
HUWE1-209ENST00000474288 SPRR2AP35326 72 aa3.72□□□□□ -1.81
HUWE1-209ENST00000474288 MT1MQ8N339 61 aa3.69□□□□□ -1.82
HUWE1-209ENST00000474288 LCE3CQ5T5A8 94 aa3.64□□□□□ -1.83
HUWE1-209ENST00000474288 SPRR2DP22532 72 aa3.59□□□□□ -1.83
HUWE1-209ENST00000474288 SPRR5A0A1B0GTR4 108 aa3.56□□□□□ -1.84
HUWE1-209ENST00000474288 KRTAP4-3Q9BYR4 195 aa3.54□□□□□ -1.84
HUWE1-209ENST00000474288 DSTQ03001 7570 aaKnown RBP3.49□□□□□ -1.85
HUWE1-209ENST00000474288 KRTAP2-3P0C7H8 128 aa3.47□□□□□ -1.85
HUWE1-209ENST00000474288 KRTAP2-4Q9BYR9 128 aa3.47□□□□□ -1.85
HUWE1-209ENST00000474288 KRTAP9-6A8MVA2 160 aa3.46□□□□□ -1.86
HUWE1-209ENST00000474288 KRTAP20-1Q3LI63 56 aa3.43□□□□□ -1.86
HUWE1-209ENST00000474288 KRTAP5-5Q701N2 237 aaPredicted RBP3.39□□□□□ -1.87
HUWE1-209ENST00000474288 KRTAP2-2Q9BYT5 123 aa3.39□□□□□ -1.87
HUWE1-209ENST00000474288 KRTAP2-1Q9BYU5 128 aa3.39□□□□□ -1.87
HUWE1-209ENST00000474288 KRTAP5-4Q6L8H1 288 aa3.32□□□□□ -1.88
HUWE1-209ENST00000474288 MT1AP04731 61 aa3.24□□□□□ -1.89
HUWE1-209ENST00000474288 SYNE1Q8NF91 8797 aaKnown RBP3.23□□□□□ -1.89
HUWE1-209ENST00000474288 HMCN1Q96RW7 5635 aa3.21□□□□□ -1.9
HUWE1-209ENST00000474288 LUZP6Q538Z0 58 aa3.21□□□□□ -1.9
HUWE1-209ENST00000474288 KRTAP6-1Q3LI64 71 aa3.19□□□□□ -1.9
HUWE1-209ENST00000474288 KRTAP12-4P60329 112 aa3.11□□□□□ -1.91
HUWE1-209ENST00000474288 MT4P47944 62 aa3.08□□□□□ -1.92
HUWE1-209ENST00000474288 KRTAP20-2Q3LI61 65 aa3.06□□□□□ -1.92
HUWE1-209ENST00000474288 MT3P25713 68 aa3.05□□□□□ -1.92
HUWE1-209ENST00000474288 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.05□□□□□ -1.92
HUWE1-209ENST00000474288 NDUFAF8A1L188 74 aa3.03□□□□□ -1.92
HUWE1-209ENST00000474288 GPR98Q8WXG9 6306 aa3.02□□□□□ -1.93
HUWE1-209ENST00000474288 KRTAP5-2Q701N4 177 aa3□□□□□ -1.93
HUWE1-209ENST00000474288 KRTAP5-11Q6L8G4 156 aa2.97□□□□□ -1.93
HUWE1-209ENST00000474288 KRTAP6-2Q3LI66 62 aa2.94□□□□□ -1.94
HUWE1-209ENST00000474288 AHNAK2Q8IVF2 5795 aa2.94□□□□□ -1.94
HUWE1-209ENST00000474288 LCE1EQ5T753 118 aa2.92□□□□□ -1.94
HUWE1-209ENST00000474288 KRTAP5-10Q6L8G5 202 aa2.72□□□□□ -1.97
HUWE1-209ENST00000474288 LCE3DQ9BYE3 92 aa2.7□□□□□ -1.98
HUWE1-209ENST00000474288 LCE1FQ5T754 118 aa2.66□□□□□ -1.98
HUWE1-209ENST00000474288 OBSCNQ5VST9 7968 aa2.64□□□□□ -1.99
HUWE1-209ENST00000474288 KRTAP5-1Q6L8H4 278 aa2.64□□□□□ -1.99
HUWE1-209ENST00000474288 MUC5ACP98088 5654 aa2.62□□□□□ -1.99
HUWE1-209ENST00000474288 KRTAP5-8O75690 187 aa2.61□□□□□ -1.99
HUWE1-209ENST00000474288 LCE3EQ5T5B0 92 aa2.61□□□□□ -1.99
HUWE1-209ENST00000474288 KRTAP5-7Q6L8G8 165 aa2.57□□□□□ -2
HUWE1-209ENST00000474288 INE1O15225 51 aa2.55□□□□□ -2
HUWE1-209ENST00000474288 KRTAP4-4Q9BYR3 166 aa2.53□□□□□ -2
HUWE1-209ENST00000474288 LCE1CQ5T751 118 aa2.45□□□□□ -2.02
HUWE1-209ENST00000474288 LCE1BQ5T7P3 118 aa2.45□□□□□ -2.02
HUWE1-209ENST00000474288 MUC5BQ9HC84 5762 aaPredicted RBP2.42□□□□□ -2.02
HUWE1-209ENST00000474288 AHNAKQ09666 5890 aaKnown RBP2.32□□□□□ -2.04
HUWE1-209ENST00000474288 PRM1P04553 51 aa2.18□□□□□ -2.06
HUWE1-209ENST00000474288 KRTAP21-2Q3LI59 83 aa2.13□□□□□ -2.07
HUWE1-209ENST00000474288 PHGR1C9JFL3 82 aa1.86□□□□□ -2.11
HUWE1-209ENST00000474288 MUC19Q7Z5P9 8384 aa1.6□□□□□ -2.15
HUWE1-209ENST00000474288 KRTAP21-1Q3LI58 79 aa1.35□□□□□ -2.19
HUWE1-209ENST00000474288 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 72.1 ms