RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 P0C880 135 aa2□□□□□ -2.09
SNRNP40-204ENST00000474025 M0QZ58 72 aa1.99□□□□□ -2.09
SNRNP40-204ENST00000474025 KRTAP5-10Q6L8G5 202 aa1.99□□□□□ -2.09
SNRNP40-204ENST00000474025 KRTAP5-7Q6L8G8 165 aa1.99□□□□□ -2.09
SNRNP40-204ENST00000474025 A0A1W2PPM0 123 aa1.98□□□□□ -2.09
SNRNP40-204ENST00000474025 SPINT4Q6UDR6 99 aa1.98□□□□□ -2.09
SNRNP40-204ENST00000474025 ATOX1O00244 68 aa1.97□□□□□ -2.09
SNRNP40-204ENST00000474025 ACYP1P07311 99 aa1.97□□□□□ -2.09
SNRNP40-204ENST00000474025 Q1T7F1 81 aa1.97□□□□□ -2.09
SNRNP40-204ENST00000474025 C20orf197Q8N268 126 aa1.97□□□□□ -2.09
SNRNP40-204ENST00000474025 SPCS1Q9Y6A9 102 aa1.96□□□□□ -2.1
SNRNP40-204ENST00000474025 KRTAP25-1Q3LHN0 102 aa1.95□□□□□ -2.1
SNRNP40-204ENST00000474025 H0Y9P7 68 aa1.94□□□□□ -2.1
SNRNP40-204ENST00000474025 KRTAP19-3Q7Z4W3 81 aa1.94□□□□□ -2.1
SNRNP40-204ENST00000474025 SPRR5A0A1B0GTR4 108 aa1.93□□□□□ -2.1
SNRNP40-204ENST00000474025 MIR22HGQ0VDD5 57 aa1.93□□□□□ -2.1
SNRNP40-204ENST00000474025 KRTAP19-7Q3SYF9 63 aa1.93□□□□□ -2.1
SNRNP40-204ENST00000474025 PRO0461Q9UI25 63 aa1.93□□□□□ -2.1
SNRNP40-204ENST00000474025 MT1EP04732 61 aa1.92□□□□□ -2.1
SNRNP40-204ENST00000474025 MT4P47944 62 aa1.92□□□□□ -2.1
SNRNP40-204ENST00000474025 SERP2Q8N6R1 65 aa1.92□□□□□ -2.1
SNRNP40-204ENST00000474025 CYSTM1Q9H1C7 97 aa1.9□□□□□ -2.11
SNRNP40-204ENST00000474025 LCE3CQ5T5A8 94 aa1.89□□□□□ -2.11
SNRNP40-204ENST00000474025 SPTSSBQ8NFR3 76 aa1.89□□□□□ -2.11
SNRNP40-204ENST00000474025 CDC42SE1Q9NRR8 79 aa1.89□□□□□ -2.11
SNRNP40-204ENST00000474025 ETDBQ3ZM63 59 aa1.88□□□□□ -2.11
SNRNP40-204ENST00000474025 LINC00208Q96KT6 92 aa1.88□□□□□ -2.11
SNRNP40-204ENST00000474025 PP632Q6XCG6 107 aa1.87□□□□□ -2.11
SNRNP40-204ENST00000474025 MT1GP13640 62 aa1.86□□□□□ -2.11
SNRNP40-204ENST00000474025 DMAC1Q96GE9 116 aa1.86□□□□□ -2.11
SNRNP40-204ENST00000474025 A8MU10 97 aa1.84□□□□□ -2.11
SNRNP40-204ENST00000474025 H7BZZ5 65 aa1.84□□□□□ -2.11
SNRNP40-204ENST00000474025 ATP5EP2Q5VTU8 51 aa1.84□□□□□ -2.11
SNRNP40-204ENST00000474025 MT1MQ8N339 61 aa1.84□□□□□ -2.11
SNRNP40-204ENST00000474025 KRTAP19-5Q3LI72 72 aa1.83□□□□□ -2.12
SNRNP40-204ENST00000474025 LINC00643Q86TS7 51 aa1.83□□□□□ -2.12
SNRNP40-204ENST00000474025 CHKB-CPT1BH3BT56 60 aa1.81□□□□□ -2.12
SNRNP40-204ENST00000474025 MT1LQ93083 61 aa1.81□□□□□ -2.12
SNRNP40-204ENST00000474025 KRTAP4-3Q9BYR4 195 aa1.81□□□□□ -2.12
SNRNP40-204ENST00000474025 KRTAP13-4Q3LI77 160 aa1.8□□□□□ -2.12
SNRNP40-204ENST00000474025 A0A0D9SG42 100 aa1.79□□□□□ -2.12
SNRNP40-204ENST00000474025 KRTAP20-2Q3LI61 65 aa1.77□□□□□ -2.13
SNRNP40-204ENST00000474025 SYNE1Q8NF91 8797 aaKnown RBP1.76□□□□□ -2.13
SNRNP40-204ENST00000474025 ACYP2P14621 99 aa1.76□□□□□ -2.13
SNRNP40-204ENST00000474025 OBSCNQ5VST9 7968 aa1.76□□□□□ -2.13
SNRNP40-204ENST00000474025 KRTAP12-4P60329 112 aa1.74□□□□□ -2.13
SNRNP40-204ENST00000474025 LCE3AQ5TA76 89 aa1.74□□□□□ -2.13
SNRNP40-204ENST00000474025 KRTAP5-5Q701N2 237 aaPredicted RBP1.72□□□□□ -2.13
SNRNP40-204ENST00000474025 C10orf95Q9H7T3 257 aa1.72□□□□□ -2.13
SNRNP40-204ENST00000474025 AHNAKQ09666 5890 aaKnown RBP1.71□□□□□ -2.13
SNRNP40-204ENST00000474025 MUC5BQ9HC84 5762 aaPredicted RBP1.71□□□□□ -2.14
SNRNP40-204ENST00000474025 INE1O15225 51 aa1.71□□□□□ -2.14
SNRNP40-204ENST00000474025 LCE3EQ5T5B0 92 aa1.71□□□□□ -2.14
SNRNP40-204ENST00000474025 KRTAP5-2Q701N4 177 aa1.71□□□□□ -2.14
SNRNP40-204ENST00000474025 LINC01558Q9Y6Z2 57 aa1.7□□□□□ -2.14
SNRNP40-204ENST00000474025 MUC5ACP98088 5654 aa1.7□□□□□ -2.14
SNRNP40-204ENST00000474025 UQCR11O14957 56 aa1.69□□□□□ -2.14
SNRNP40-204ENST00000474025 COA5Q86WW8 74 aa1.69□□□□□ -2.14
SNRNP40-204ENST00000474025 SNURFQ9Y675 71 aa1.69□□□□□ -2.14
SNRNP40-204ENST00000474025 KRTAP12-1P59990 96 aa1.68□□□□□ -2.14
SNRNP40-204ENST00000474025 PRR15LQ9BU68 103 aa1.68□□□□□ -2.14
SNRNP40-204ENST00000474025 SPATA8Q6RVD6 105 aa1.66□□□□□ -2.14
SNRNP40-204ENST00000474025 TNP1P09430 55 aa1.63□□□□□ -2.15
SNRNP40-204ENST00000474025 KRTAP12-3P60328 96 aa1.63□□□□□ -2.15
SNRNP40-204ENST00000474025 KRTAP5-8O75690 187 aa1.62□□□□□ -2.15
SNRNP40-204ENST00000474025 LCE1CQ5T751 118 aa1.55□□□□□ -2.16
SNRNP40-204ENST00000474025 LCE1BQ5T7P3 118 aa1.55□□□□□ -2.16
SNRNP40-204ENST00000474025 KRTAP6-1Q3LI64 71 aa1.54□□□□□ -2.16
SNRNP40-204ENST00000474025 MT1AP04731 61 aa1.52□□□□□ -2.17
SNRNP40-204ENST00000474025 A0A1B0GU69 56 aa1.51□□□□□ -2.17
SNRNP40-204ENST00000474025 KRTAP6-2Q3LI66 62 aa1.5□□□□□ -2.17
SNRNP40-204ENST00000474025 LCE3DQ9BYE3 92 aa1.4□□□□□ -2.19
SNRNP40-204ENST00000474025 MUC19Q7Z5P9 8384 aa1.2□□□□□ -2.22
SNRNP40-204ENST00000474025 PHGR1C9JFL3 82 aa1.19□□□□□ -2.22
SNRNP40-204ENST00000474025 KRTAP21-2Q3LI59 83 aa1.11□□□□□ -2.23
SNRNP40-204ENST00000474025 KRTAP21-1Q3LI58 79 aa0.96□□□□□ -2.26
SNRNP40-204ENST00000474025 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
SNRNP40-204ENST00000474025 PRM1P04553 51 aa0.71□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 7 ms