RNA–Protein interactions for RNA: ENST00000473820.1

PPP2R1A-208, Transcript of protein phosphatase 2 scaffold subunit Aalpha, human

TSL 2

Gene PPP2R1A, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP2R1A-208	ENST00000473820	TNP1	P09430	55 aa		4.14	□□□□□ -1.75
PPP2R1A-208	ENST00000473820	KRTAP8-1	Q8IUC2	63 aa		4.14	□□□□□ -1.75
PPP2R1A-208	ENST00000473820	MT1X	P80297	61 aa		4.13	□□□□□ -1.75
PPP2R1A-208	ENST00000473820	LCE1A	Q5T7P2	110 aa		4.13	□□□□□ -1.75
PPP2R1A-208	ENST00000473820	LCE3B	Q5TA77	95 aa		4.05	□□□□□ -1.76
PPP2R1A-208	ENST00000473820	DST	Q03001	7570 aa	Known RBP	4	□□□□□ -1.77
PPP2R1A-208	ENST00000473820	KRTAP4-8	A0A0G2JLE6	195 aa		3.98	□□□□□ -1.77
PPP2R1A-208	ENST00000473820	KRTAP4-8	Q9BYQ9	185 aa		3.98	□□□□□ -1.77
PPP2R1A-208	ENST00000473820		A0A0A0MQY5	61 aa		3.96	□□□□□ -1.78
PPP2R1A-208	ENST00000473820	KRTAP10-7	P60409	375 aa	Predicted RBP	3.96	□□□□□ -1.78
PPP2R1A-208	ENST00000473820	KRTAP15-1	Q3LI76	137 aa		3.94	□□□□□ -1.78
PPP2R1A-208	ENST00000473820	KRTAP10-12	P60413	245 aa		3.91	□□□□□ -1.78
PPP2R1A-208	ENST00000473820	KRTAP4-9	Q9BYQ8	210 aa		3.88	□□□□□ -1.79
PPP2R1A-208	ENST00000473820	LCE3A	Q5TA76	89 aa		3.81	□□□□□ -1.8
PPP2R1A-208	ENST00000473820	LUZP6	Q538Z0	58 aa		3.78	□□□□□ -1.8
PPP2R1A-208	ENST00000473820	SPRR5	A0A1B0GTR4	108 aa		3.74	□□□□□ -1.81
PPP2R1A-208	ENST00000473820	KRTAP12-3	P60328	96 aa		3.72	□□□□□ -1.81
PPP2R1A-208	ENST00000473820	HMCN1	Q96RW7	5635 aa		3.71	□□□□□ -1.82
PPP2R1A-208	ENST00000473820	NDUFAF8	A1L188	74 aa		3.71	□□□□□ -1.82
PPP2R1A-208	ENST00000473820	LCE1D	Q5T752	114 aa		3.71	□□□□□ -1.82
PPP2R1A-208	ENST00000473820	KRTAP5-10	Q6L8G5	202 aa		3.69	□□□□□ -1.82
PPP2R1A-208	ENST00000473820	AHNAK2	Q8IVF2	5795 aa		3.68	□□□□□ -1.82
PPP2R1A-208	ENST00000473820	KRTAP19-7	Q3SYF9	63 aa		3.68	□□□□□ -1.82
PPP2R1A-208	ENST00000473820	MT4	P47944	62 aa		3.67	□□□□□ -1.82
PPP2R1A-208	ENST00000473820	KRTAP19-4	Q3LI73	84 aa		3.67	□□□□□ -1.82
PPP2R1A-208	ENST00000473820	LCE5A	Q5TCM9	118 aa		3.67	□□□□□ -1.82
PPP2R1A-208	ENST00000473820	MT1E	P04732	61 aa		3.65	□□□□□ -1.83
PPP2R1A-208	ENST00000473820	KRTAP19-5	Q3LI72	72 aa		3.65	□□□□□ -1.83
PPP2R1A-208	ENST00000473820	KRTAP5-7	Q6L8G8	165 aa		3.63	□□□□□ -1.83
PPP2R1A-208	ENST00000473820	KRTAP19-3	Q7Z4W3	81 aa		3.63	□□□□□ -1.83
PPP2R1A-208	ENST00000473820	LCE4A	Q5TA78	99 aa		3.62	□□□□□ -1.83
PPP2R1A-208	ENST00000473820	MT1G	P13640	62 aa		3.53	□□□□□ -1.84
PPP2R1A-208	ENST00000473820	MT1L	Q93083	61 aa		3.51	□□□□□ -1.85
PPP2R1A-208	ENST00000473820	LCE3C	Q5T5A8	94 aa		3.49	□□□□□ -1.85
PPP2R1A-208	ENST00000473820	KRTAP4-6	Q9BYQ5	205 aa		3.49	□□□□□ -1.85
PPP2R1A-208	ENST00000473820	MT1M	Q8N339	61 aa		3.47	□□□□□ -1.85
PPP2R1A-208	ENST00000473820	KRTAP5-3	Q6L8H2	238 aa		3.44	□□□□□ -1.86
PPP2R1A-208	ENST00000473820	KRTAP5-4	Q6L8H1	288 aa		3.43	□□□□□ -1.86
PPP2R1A-208	ENST00000473820	KRTAP4-3	Q9BYR4	195 aa		3.41	□□□□□ -1.86
PPP2R1A-208	ENST00000473820	KRTAP4-7	Q9BYR0	210 aa		3.38	□□□□□ -1.87
PPP2R1A-208	ENST00000473820	AHNAK	Q09666	5890 aa	Known RBP	3.31	□□□□□ -1.88
PPP2R1A-208	ENST00000473820	KRTAP20-2	Q3LI61	65 aa		3.3	□□□□□ -1.88
PPP2R1A-208	ENST00000473820	KRTAP12-4	P60329	112 aa		3.24	□□□□□ -1.89
PPP2R1A-208	ENST00000473820	SYNE1	Q8NF91	8797 aa	Known RBP	3.22	□□□□□ -1.89
PPP2R1A-208	ENST00000473820	INE1	O15225	51 aa		3.21	□□□□□ -1.9
PPP2R1A-208	ENST00000473820	LOC100996750	A0A140TA64	210 aa		3.2	□□□□□ -1.9
PPP2R1A-208	ENST00000473820	KRTAP9-6	A8MVA2	160 aa		3.2	□□□□□ -1.9
PPP2R1A-208	ENST00000473820	KRTAP9-4	Q9BYQ2	154 aa		3.17	□□□□□ -1.9
PPP2R1A-208	ENST00000473820	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.15	□□□□□ -1.9
PPP2R1A-208	ENST00000473820	MUC5AC	P98088	5654 aa		3.15	□□□□□ -1.9
PPP2R1A-208	ENST00000473820	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.15	□□□□□ -1.91
PPP2R1A-208	ENST00000473820	KRTAP9-9	Q9BYP9	154 aa		3.11	□□□□□ -1.91
PPP2R1A-208	ENST00000473820	KRTAP4-11	Q9BYQ6	195 aa		3.11	□□□□□ -1.91
PPP2R1A-208	ENST00000473820	KRTAP4-12	Q9BQ66	201 aa		3.1	□□□□□ -1.91
PPP2R1A-208	ENST00000473820	KRTAP5-8	O75690	187 aa		3.01	□□□□□ -1.93
PPP2R1A-208	ENST00000473820	MT1A	P04731	61 aa		2.98	□□□□□ -1.93
PPP2R1A-208	ENST00000473820	OBSCN	Q5VST9	7968 aa		2.98	□□□□□ -1.93
PPP2R1A-208	ENST00000473820	KRTAP6-1	Q3LI64	71 aa		2.97	□□□□□ -1.93
PPP2R1A-208	ENST00000473820	KRTAP5-2	Q701N4	177 aa		2.94	□□□□□ -1.94
PPP2R1A-208	ENST00000473820	KRTAP6-2	Q3LI66	62 aa		2.83	□□□□□ -1.96
PPP2R1A-208	ENST00000473820	MT3	P25713	68 aa		2.74	□□□□□ -1.97
PPP2R1A-208	ENST00000473820	KRTAP5-1	Q6L8H4	278 aa		2.7	□□□□□ -1.98
PPP2R1A-208	ENST00000473820	LCE3D	Q9BYE3	92 aa		2.66	□□□□□ -1.98
PPP2R1A-208	ENST00000473820	LCE3E	Q5T5B0	92 aa		2.63	□□□□□ -1.99
PPP2R1A-208	ENST00000473820	LCE1E	Q5T753	118 aa		2.5	□□□□□ -2.01
PPP2R1A-208	ENST00000473820	LCE1F	Q5T754	118 aa		2.47	□□□□□ -2.01
PPP2R1A-208	ENST00000473820	LCE1B	Q5T7P3	118 aa		2.45	□□□□□ -2.02
PPP2R1A-208	ENST00000473820	KRTAP4-2	Q9BYR5	136 aa		2.41	□□□□□ -2.02
PPP2R1A-208	ENST00000473820	PRM1	P04553	51 aa		2.32	□□□□□ -2.04
PPP2R1A-208	ENST00000473820	LCE1C	Q5T751	118 aa		2.31	□□□□□ -2.04
PPP2R1A-208	ENST00000473820	PHGR1	C9JFL3	82 aa		2.16	□□□□□ -2.06
PPP2R1A-208	ENST00000473820	KRTAP5-11	Q6L8G4	156 aa		2.14	□□□□□ -2.07
PPP2R1A-208	ENST00000473820	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.07	□□□□□ -2.08
PPP2R1A-208	ENST00000473820	KRTAP21-2	Q3LI59	83 aa		1.95	□□□□□ -2.1
PPP2R1A-208	ENST00000473820	MUC19	Q7Z5P9	8384 aa		1.87	□□□□□ -2.11
PPP2R1A-208	ENST00000473820	KRTAP4-4	Q9BYR3	166 aa		1.82	□□□□□ -2.12
PPP2R1A-208	ENST00000473820	KRTAP21-1	Q3LI58	79 aa		1.63	□□□□□ -2.15
PPP2R1A-208	ENST00000473820	MUC16	Q8WXI7	14507 aa		1.26	□□□□□ -2.21

Retrieved 78 of 20,778 RNA–protein pairs in 5.8 ms