RNA–Protein interactions for RNA: ENST00000473643.1

SMG5-203, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-203ENST00000473643 KRTAP23-1A1A580 65 aa3.45□□□□□ -1.86
SMG5-203ENST00000473643 GPR98Q8WXG9 6306 aa3.45□□□□□ -1.86
SMG5-203ENST00000473643 LCE3AQ5TA76 89 aa3.43□□□□□ -1.86
SMG5-203ENST00000473643 KRTAP2-2Q9BYT5 123 aa3.43□□□□□ -1.86
SMG5-203ENST00000473643 KRTAP2-1Q9BYU5 128 aa3.43□□□□□ -1.86
SMG5-203ENST00000473643 SPRR2DP22532 72 aa3.42□□□□□ -1.86
SMG5-203ENST00000473643 KRTAP19-7Q3SYF9 63 aa3.4□□□□□ -1.87
SMG5-203ENST00000473643 KRTAP19-5Q3LI72 72 aa3.37□□□□□ -1.87
SMG5-203ENST00000473643 PP632Q6XCG6 107 aa3.36□□□□□ -1.87
SMG5-203ENST00000473643 PRAC1Q96KF2 57 aa3.35□□□□□ -1.87
SMG5-203ENST00000473643 MT1EP04732 61 aa3.34□□□□□ -1.87
SMG5-203ENST00000473643 LCE3BQ5TA77 95 aa3.34□□□□□ -1.87
SMG5-203ENST00000473643 H3BS24 57 aa3.33□□□□□ -1.88
SMG5-203ENST00000473643 DSTQ03001 7570 aaKnown RBP3.33□□□□□ -1.88
SMG5-203ENST00000473643 KRTAP12-3P60328 96 aa3.32□□□□□ -1.88
SMG5-203ENST00000473643 LCE5AQ5TCM9 118 aa3.3□□□□□ -1.88
SMG5-203ENST00000473643 KRTAP19-3Q7Z4W3 81 aa3.27□□□□□ -1.89
SMG5-203ENST00000473643 MT1LQ93083 61 aa3.25□□□□□ -1.89
SMG5-203ENST00000473643 MT1GP13640 62 aa3.23□□□□□ -1.89
SMG5-203ENST00000473643 KRTAP19-4Q3LI73 84 aa3.21□□□□□ -1.9
SMG5-203ENST00000473643 KRTAP15-1Q3LI76 137 aa3.21□□□□□ -1.9
SMG5-203ENST00000473643 KRTAP4-9Q9BYQ8 210 aa3.18□□□□□ -1.9
SMG5-203ENST00000473643 MT1MQ8N339 61 aa3.16□□□□□ -1.9
SMG5-203ENST00000473643 HMCN1Q96RW7 5635 aa3.09□□□□□ -1.91
SMG5-203ENST00000473643 LCE3CQ5T5A8 94 aa3.09□□□□□ -1.91
SMG5-203ENST00000473643 KRTAP4-7Q9BYR0 210 aa3.09□□□□□ -1.91
SMG5-203ENST00000473643 KRTAP4-3Q9BYR4 195 aa3.06□□□□□ -1.92
SMG5-203ENST00000473643 AHNAK2Q8IVF2 5795 aa3.06□□□□□ -1.92
SMG5-203ENST00000473643 LCE4AQ5TA78 99 aa3.05□□□□□ -1.92
SMG5-203ENST00000473643 LCE1DQ5T752 114 aa3.04□□□□□ -1.92
SMG5-203ENST00000473643 KRTAP5-4Q6L8H1 288 aa3.02□□□□□ -1.93
SMG5-203ENST00000473643 MT4P47944 62 aa3□□□□□ -1.93
SMG5-203ENST00000473643 KRTAP5-10Q6L8G5 202 aa2.97□□□□□ -1.93
SMG5-203ENST00000473643 KRTAP4-6Q9BYQ5 205 aa2.94□□□□□ -1.94
SMG5-203ENST00000473643 NDUFAF8A1L188 74 aa2.93□□□□□ -1.94
SMG5-203ENST00000473643 SPRR5A0A1B0GTR4 108 aa2.91□□□□□ -1.94
SMG5-203ENST00000473643 KRTAP9-6A8MVA2 160 aa2.91□□□□□ -1.94
SMG5-203ENST00000473643 LOC100996750A0A140TA64 210 aa2.9□□□□□ -1.95
SMG5-203ENST00000473643 KRTAP5-5Q701N2 237 aaPredicted RBP2.9□□□□□ -1.95
SMG5-203ENST00000473643 KRTAP5-7Q6L8G8 165 aa2.88□□□□□ -1.95
SMG5-203ENST00000473643 SYNE1Q8NF91 8797 aaKnown RBP2.85□□□□□ -1.95
SMG5-203ENST00000473643 KRTAP20-2Q3LI61 65 aa2.83□□□□□ -1.96
SMG5-203ENST00000473643 KRTAP5-3Q6L8H2 238 aa2.83□□□□□ -1.96
SMG5-203ENST00000473643 KRTAP12-4P60329 112 aa2.81□□□□□ -1.96
SMG5-203ENST00000473643 LUZP6Q538Z0 58 aa2.8□□□□□ -1.96
SMG5-203ENST00000473643 A0A0A0MQY5 61 aa2.79□□□□□ -1.96
SMG5-203ENST00000473643 MT1AP04731 61 aa2.77□□□□□ -1.97
SMG5-203ENST00000473643 KRTAP6-1Q3LI64 71 aa2.72□□□□□ -1.97
SMG5-203ENST00000473643 KRTAP9-4Q9BYQ2 154 aa2.66□□□□□ -1.98
SMG5-203ENST00000473643 KRTAP5-2Q701N4 177 aa2.64□□□□□ -1.99
SMG5-203ENST00000473643 AHNAKQ09666 5890 aaKnown RBP2.6□□□□□ -1.99
SMG5-203ENST00000473643 KRTAP4-11Q9BYQ6 195 aa2.59□□□□□ -1.99
SMG5-203ENST00000473643 MUC5BQ9HC84 5762 aaPredicted RBP2.57□□□□□ -2
SMG5-203ENST00000473643 MUC5ACP98088 5654 aa2.56□□□□□ -2
SMG5-203ENST00000473643 INE1O15225 51 aa2.56□□□□□ -2
SMG5-203ENST00000473643 OBSCNQ5VST9 7968 aa2.56□□□□□ -2
SMG5-203ENST00000473643 KRTAP6-2Q3LI66 62 aa2.55□□□□□ -2
SMG5-203ENST00000473643 MT3P25713 68 aa2.52□□□□□ -2.01
SMG5-203ENST00000473643 KRTAP5-8O75690 187 aa2.51□□□□□ -2.01
SMG5-203ENST00000473643 KRTAP5-1Q6L8H4 278 aa2.37□□□□□ -2.03
SMG5-203ENST00000473643 KRTAP9-9Q9BYP9 154 aa2.36□□□□□ -2.03
SMG5-203ENST00000473643 LCE1EQ5T753 118 aa2.29□□□□□ -2.04
SMG5-203ENST00000473643 LCE3DQ9BYE3 92 aa2.29□□□□□ -2.04
SMG5-203ENST00000473643 LCE3EQ5T5B0 92 aa2.2□□□□□ -2.06
SMG5-203ENST00000473643 KRTAP4-12Q9BQ66 201 aa2.18□□□□□ -2.06
SMG5-203ENST00000473643 KRTAP4-2Q9BYR5 136 aa2.14□□□□□ -2.07
SMG5-203ENST00000473643 LCE1CQ5T751 118 aa2.11□□□□□ -2.07
SMG5-203ENST00000473643 LCE1BQ5T7P3 118 aa2.11□□□□□ -2.07
SMG5-203ENST00000473643 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.96□□□□□ -2.1
SMG5-203ENST00000473643 KRTAP5-11Q6L8G4 156 aa1.9□□□□□ -2.11
SMG5-203ENST00000473643 LCE1FQ5T754 118 aa1.87□□□□□ -2.11
SMG5-203ENST00000473643 KRTAP21-2Q3LI59 83 aa1.81□□□□□ -2.12
SMG5-203ENST00000473643 PRM1P04553 51 aa1.8□□□□□ -2.12
SMG5-203ENST00000473643 PHGR1C9JFL3 82 aa1.75□□□□□ -2.13
SMG5-203ENST00000473643 KRTAP4-4Q9BYR3 166 aa1.59□□□□□ -2.15
SMG5-203ENST00000473643 MUC19Q7Z5P9 8384 aa1.58□□□□□ -2.16
SMG5-203ENST00000473643 KRTAP21-1Q3LI58 79 aa1.3□□□□□ -2.2
SMG5-203ENST00000473643 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 90 ms