RNA–Protein interactions for RNA: ENST00000473542.1

BBX-223, Transcript of BBX, HMG-box containing, human

TSL 3

Gene BBX, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBX-223	ENST00000473542	TFF3	Q07654	80 aa		-2.84	□□□□□ -2.86
BBX-223	ENST00000473542	DEFB136	Q30KP8	78 aa		-2.84	□□□□□ -2.86
BBX-223	ENST00000473542	ADCY10	Q96PN6	1610 aa		-2.85	□□□□□ -2.87
BBX-223	ENST00000473542	SMIM2	Q9BVW6	85 aa		-2.89	□□□□□ -2.87
BBX-223	ENST00000473542	DCHS1	Q96JQ0	3298 aa		-2.9	□□□□□ -2.87
BBX-223	ENST00000473542	WDFY4	Q6ZS81	3184 aa		-2.9	□□□□□ -2.87
BBX-223	ENST00000473542	PCNT	O95613	3336 aa		-2.91	□□□□□ -2.87
BBX-223	ENST00000473542	EP400	Q96L91	3159 aa		-2.92	□□□□□ -2.88
BBX-223	ENST00000473542	NRXN3	Q9Y4C0	1643 aa		-2.92	□□□□□ -2.88
BBX-223	ENST00000473542	SMIM31	A0A1B0GVY4	71 aa		-2.93	□□□□□ -2.88
BBX-223	ENST00000473542	MUC3A	Q02505	3323 aa		-2.95	□□□□□ -2.88
BBX-223	ENST00000473542	TRPM2	O94759	1503 aa		-2.96	□□□□□ -2.88
BBX-223	ENST00000473542	ABCC8	Q09428	1581 aa		-2.96	□□□□□ -2.88
BBX-223	ENST00000473542	IQGAP1	P46940	1657 aa		-2.97	□□□□□ -2.88
BBX-223	ENST00000473542	SZT2	Q5T011	3432 aa		-2.98	□□□□□ -2.89
BBX-223	ENST00000473542	DDX60	Q8IY21	1712 aa	Known RBP	-2.98	□□□□□ -2.89
BBX-223	ENST00000473542	CMC2	Q9NRP2	79 aa		-2.99	□□□□□ -2.89
BBX-223	ENST00000473542	FANCD2	Q9BXW9	1451 aa		-3.02	□□□□□ -2.89
BBX-223	ENST00000473542	CLTCL1	P53675	1640 aa		-3.02	□□□□□ -2.89
BBX-223	ENST00000473542	CEP250	Q9BV73	2442 aa		-3.03	□□□□□ -2.89
BBX-223	ENST00000473542	DNAH14	Q0VDD8	3507 aa		-3.03	□□□□□ -2.89
BBX-223	ENST00000473542	MKI67	P46013	3256 aa	Known RBP	-3.05	□□□□□ -2.9
BBX-223	ENST00000473542	CFAP47	Q6ZTR5	3102 aa		-3.07	□□□□□ -2.9
BBX-223	ENST00000473542	NFAT5	O94916	1531 aa		-3.08	□□□□□ -2.9
BBX-223	ENST00000473542	NDUFA1	O15239	70 aa		-3.19	□□□□□ -2.92
BBX-223	ENST00000473542	ERICH3	Q5RHP9	1530 aa		-3.21	□□□□□ -2.92
BBX-223	ENST00000473542	USP34	Q70CQ2	3546 aa		-3.23	□□□□□ -2.93
BBX-223	ENST00000473542	LOC400499	M0QZD8	3231 aa		-3.24	□□□□□ -2.93
BBX-223	ENST00000473542	TTTY10	Q9BZA0	68 aa		-3.28	□□□□□ -2.93
BBX-223	ENST00000473542	DNAH12	Q6ZR08	3092 aa		-3.3	□□□□□ -2.94
BBX-223	ENST00000473542	VCAN	P13611	3396 aa		-3.32	□□□□□ -2.94
BBX-223	ENST00000473542	UNC80	Q8N2C7	3258 aa		-3.32	□□□□□ -2.94
BBX-223	ENST00000473542	ASPM	Q8IZT6	3477 aa		-3.45	□□□□□ -2.96
BBX-223	ENST00000473542	CENPF	P49454	3210 aa		-3.46	□□□□□ -2.96
BBX-223	ENST00000473542	SNRPGP15	A8MWD9	76 aa		-3.51	□□□□□ -2.97
BBX-223	ENST00000473542	KRTAP19-2	Q3LHN2	52 aa		-3.51	□□□□□ -2.97
BBX-223	ENST00000473542	TOMM7	Q9P0U1	55 aa		-3.54	□□□□□ -2.98
BBX-223	ENST00000473542	CDH23	Q9H251	3354 aa		-3.55	□□□□□ -2.98
BBX-223	ENST00000473542	LINC01590	Q5TEZ4	76 aa		-3.57	□□□□□ -2.98
BBX-223	ENST00000473542	XIRP2	A4UGR9	3374 aa		-3.61	□□□□□ -2.99
BBX-223	ENST00000473542	BRCA2	P51587	3418 aa		-3.63	□□□□□ -2.99
BBX-223	ENST00000473542	VPS13A	Q96RL7	3174 aa		-3.65	□□□□□ -2.99
BBX-223	ENST00000473542	SAMD9L	Q8IVG5	1584 aa		-3.68	□□□□□ -3
BBX-223	ENST00000473542	RHPN1-AS1	Q9BWJ2	59 aa		-3.68	□□□□□ -3
BBX-223	ENST00000473542	DEFB133	Q30KQ1	61 aa		-3.71	□□□□□ -3
BBX-223	ENST00000473542	IQGAP2	Q13576	1575 aa		-3.75	□□□□□ -3.01
BBX-223	ENST00000473542	DUOX1	Q9NRD9	1551 aa		-3.76	□□□□□ -3.01
BBX-223	ENST00000473542	CD52	P31358	61 aa		-3.77	□□□□□ -3.01
BBX-223	ENST00000473542	RPL39	P62891	51 aa	Known RBP	-3.84	□□□□□ -3.02
BBX-223	ENST00000473542	ATP7A	Q04656	1500 aa		-3.86	□□□□□ -3.03
BBX-223	ENST00000473542	HTN1	P15515	57 aa		-3.87	□□□□□ -3.03
BBX-223	ENST00000473542	UTRN	P46939	3433 aa		-3.93	□□□□□ -3.04
BBX-223	ENST00000473542	TOMM5	Q8N4H5	51 aa		-3.95	□□□□□ -3.04
BBX-223	ENST00000473542		A0A096LNI7	61 aa		-3.97	□□□□□ -3.04
BBX-223	ENST00000473542	TOP2A	P11388	1531 aa	Known RBP	-4.01	□□□□□ -3.05
BBX-223	ENST00000473542	RPL39L	Q96EH5	51 aa	Known RBP	-4.03	□□□□□ -3.05
BBX-223	ENST00000473542	MROH2B	Q7Z745	1585 aa		-4.05	□□□□□ -3.06
BBX-223	ENST00000473542	DEFB124	Q8NES8	71 aa		-4.09	□□□□□ -3.06
BBX-223	ENST00000473542	DEFB104A	Q8WTQ1	72 aa		-4.11	□□□□□ -3.07
BBX-223	ENST00000473542	LINC01556	Q5JQF7	62 aa		-4.21	□□□□□ -3.08
BBX-223	ENST00000473542	GOLGB1	Q14789	3259 aa	Known RBP	-4.27	□□□□□ -3.09
BBX-223	ENST00000473542		H3BUX3	64 aa		-4.47	□□□□□ -3.13
BBX-223	ENST00000473542	APELA	P0DMC3	54 aa		-4.63	□□□□□ -3.15
BBX-223	ENST00000473542		K7EIM0	57 aa		-4.67	□□□□□ -3.16
BBX-223	ENST00000473542		A0A096LPF7	62 aa		-4.71	□□□□□ -3.16
BBX-223	ENST00000473542	HTN3	P15516	51 aa		-4.77	□□□□□ -3.17
BBX-223	ENST00000473542	GCC2	Q8IWJ2	1684 aa		-4.83	□□□□□ -3.18
BBX-223	ENST00000473542	ARHGAP5-AS1	Q96IT6	56 aa		-4.89	□□□□□ -3.19
BBX-223	ENST00000473542	SNRPG	P62308	76 aa	Known RBP	-4.9	□□□□□ -3.19
BBX-223	ENST00000473542	PRCD	Q00LT1	54 aa		-4.97	□□□□□ -3.21
BBX-223	ENST00000473542		H3BSH0	61 aa		-5.06	□□□□□ -3.22
BBX-223	ENST00000473542	TMEM167A	Q8TBQ9	72 aa		-5.07	□□□□□ -3.22
BBX-223	ENST00000473542		Q9Y3F1	56 aa		-5.17	□□□□□ -3.24
BBX-223	ENST00000473542	COX14	Q96I36	57 aa		-5.37	□□□□□ -3.27
BBX-223	ENST00000473542	RPL39P5	Q59GN2	51 aa		-5.54	□□□□□ -3.3
BBX-223	ENST00000473542	DEFB108A	A8MXU0	73 aa		-5.58	□□□□□ -3.3
BBX-223	ENST00000473542	DEFB108B	Q8NET1	73 aa		-5.62	□□□□□ -3.31
BBX-223	ENST00000473542	STATH	P02808	62 aa		-5.76	□□□□□ -3.33

Retrieved 78 of 20,778 RNA–protein pairs in 72.4 ms