RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 SPRR2FQ96RM1 72 aa0.75□□□□□ -2.29
XRN1-210ENST00000472697 KCNQ1DNQ9H478 68 aa0.75□□□□□ -2.29
XRN1-210ENST00000472697 A0A087WXM4 84 aa0.75□□□□□ -2.29
XRN1-210ENST00000472697 D6R8Y8 96 aa0.75□□□□□ -2.29
XRN1-210ENST00000472697 IFI27P40305 119 aaPredicted RBP0.75□□□□□ -2.29
XRN1-210ENST00000472697 KRTAP19-8Q3LI54 63 aa0.75□□□□□ -2.29
XRN1-210ENST00000472697 MUSTN1Q8IVN3 82 aa0.75□□□□□ -2.29
XRN1-210ENST00000472697 IGLC3P0DOY3 106 aa0.74□□□□□ -2.29
XRN1-210ENST00000472697 BVES-AS1Q5T3Y7 98 aa0.73□□□□□ -2.29
XRN1-210ENST00000472697 KRTAP8-1Q8IUC2 63 aa0.73□□□□□ -2.29
XRN1-210ENST00000472697 RPL39LQ96EH5 51 aaKnown RBP0.73□□□□□ -2.29
XRN1-210ENST00000472697 UMAD1C9J7I0 102 aa0.72□□□□□ -2.29
XRN1-210ENST00000472697 KRTAP21-2Q3LI59 83 aa0.72□□□□□ -2.29
XRN1-210ENST00000472697 SMIM2Q9BVW6 85 aa0.72□□□□□ -2.29
XRN1-210ENST00000472697 SPRR2GQ9BYE4 73 aa0.72□□□□□ -2.29
XRN1-210ENST00000472697 TOMM7Q9P0U1 55 aa0.72□□□□□ -2.29
XRN1-210ENST00000472697 A0A1B0GUT8 65 aa0.71□□□□□ -2.29
XRN1-210ENST00000472697 MT1BP07438 61 aa0.71□□□□□ -2.29
XRN1-210ENST00000472697 C3orf79P0CE67 100 aa0.71□□□□□ -2.29
XRN1-210ENST00000472697 ADIRFQ15847 76 aa0.71□□□□□ -2.29
XRN1-210ENST00000472697 A0A1B0GU69 56 aa0.7□□□□□ -2.3
XRN1-210ENST00000472697 H0Y9P7 68 aa0.7□□□□□ -2.3
XRN1-210ENST00000472697 K7EQZ3 153 aa0.7□□□□□ -2.3
XRN1-210ENST00000472697 WFDC13Q8IUB5 93 aa0.7□□□□□ -2.3
XRN1-210ENST00000472697 IGLV5-48A0A075B6I7 105 aa0.69□□□□□ -2.3
XRN1-210ENST00000472697 H1FX-AS1Q4G0G2 97 aa0.69□□□□□ -2.3
XRN1-210ENST00000472697 SPATA8Q6RVD6 105 aa0.69□□□□□ -2.3
XRN1-210ENST00000472697 CDKN2A-AS1Q9UH64 79 aa0.69□□□□□ -2.3
XRN1-210ENST00000472697 MYMXA0A1B0GTQ4 84 aa0.69□□□□□ -2.3
XRN1-210ENST00000472697 IGIPA6NJ69 53 aa0.69□□□□□ -2.3
XRN1-210ENST00000472697 RPL39P62891 51 aaKnown RBP0.69□□□□□ -2.3
XRN1-210ENST00000472697 LINC00158P58513 81 aa0.67□□□□□ -2.3
XRN1-210ENST00000472697 LINC00643Q86TS7 51 aa0.67□□□□□ -2.3
XRN1-210ENST00000472697 LINC01546A6NGU7 62 aa0.66□□□□□ -2.3
XRN1-210ENST00000472697 COX7BP24311 80 aa0.66□□□□□ -2.3
XRN1-210ENST00000472697 GNG13Q9P2W3 67 aa0.66□□□□□ -2.3
XRN1-210ENST00000472697 SMIM27A0A1W2PRY6 76 aa0.65□□□□□ -2.3
XRN1-210ENST00000472697 S100ZQ8WXG8 99 aa0.65□□□□□ -2.3
XRN1-210ENST00000472697 MT4P47944 62 aa0.65□□□□□ -2.31
XRN1-210ENST00000472697 TRBV7-4A0A0J9YYF1 115 aa0.64□□□□□ -2.31
XRN1-210ENST00000472697 KANTRA0A1W2PQU2 76 aa0.64□□□□□ -2.31
XRN1-210ENST00000472697 H0YAA0 97 aa0.64□□□□□ -2.31
XRN1-210ENST00000472697 SMIM13P0DJ93 91 aa0.63□□□□□ -2.31
XRN1-210ENST00000472697 MT1XP80297 61 aa0.63□□□□□ -2.31
XRN1-210ENST00000472697 KRTAP19-3Q7Z4W3 81 aa0.63□□□□□ -2.31
XRN1-210ENST00000472697 KRTAP20-2Q3LI61 65 aa0.63□□□□□ -2.31
XRN1-210ENST00000472697 C18orf32Q8TCD1 76 aa0.62□□□□□ -2.31
XRN1-210ENST00000472697 MT1GP13640 62 aa0.62□□□□□ -2.31
XRN1-210ENST00000472697 TP53AIP1Q9HCN2 124 aa0.62□□□□□ -2.31
XRN1-210ENST00000472697 DEFB105AQ8NG35 78 aa0.61□□□□□ -2.31
XRN1-210ENST00000472697 SMCO4Q9NRQ5 59 aa0.61□□□□□ -2.31
XRN1-210ENST00000472697 S4R3F8 94 aa0.61□□□□□ -2.31
XRN1-210ENST00000472697 PLNP26678 52 aa0.61□□□□□ -2.31
XRN1-210ENST00000472697 PHGR1C9JFL3 82 aa0.61□□□□□ -2.31
XRN1-210ENST00000472697 NDUFB1O75438 58 aa0.6□□□□□ -2.31
XRN1-210ENST00000472697 MT1EP04732 61 aa0.59□□□□□ -2.31
XRN1-210ENST00000472697 LINC00308Q8TCZ7 52 aa0.59□□□□□ -2.31
XRN1-210ENST00000472697 ACYP1P07311 99 aa0.58□□□□□ -2.32
XRN1-210ENST00000472697 KRTAP21-1Q3LI58 79 aa0.58□□□□□ -2.32
XRN1-210ENST00000472697 MT1MQ8N339 61 aa0.57□□□□□ -2.32
XRN1-210ENST00000472697 KRTAP19-7Q3SYF9 63 aa0.56□□□□□ -2.32
XRN1-210ENST00000472697 H0YGX0 51 aa0.56□□□□□ -2.32
XRN1-210ENST00000472697 MRPL34Q9BQ48 92 aaKnown RBP0.56□□□□□ -2.32
XRN1-210ENST00000472697 NREPQ16612 68 aa0.53□□□□□ -2.32
XRN1-210ENST00000472697 MT1LQ93083 61 aa0.53□□□□□ -2.32
XRN1-210ENST00000472697 MMP24-AS1A0A0U1RRL7 71 aa0.52□□□□□ -2.33
XRN1-210ENST00000472697 MUC16Q8WXI7 14507 aa0.52□□□□□ -2.33
XRN1-210ENST00000472697 M0QZ58 72 aa0.52□□□□□ -2.33
XRN1-210ENST00000472697 KRTAP19-5Q3LI72 72 aa0.5□□□□□ -2.33
XRN1-210ENST00000472697 MT1AP04731 61 aa0.49□□□□□ -2.33
XRN1-210ENST00000472697 COX8AP10176 69 aa0.46□□□□□ -2.34
XRN1-210ENST00000472697 ATP5EP2Q5VTU8 51 aa0.45□□□□□ -2.34
XRN1-210ENST00000472697 TNP1P09430 55 aa0.44□□□□□ -2.34
XRN1-210ENST00000472697 KRTAP6-2Q3LI66 62 aa0.44□□□□□ -2.34
XRN1-210ENST00000472697 ATXN8Q156A1 80 aa0.42□□□□□ -2.34
XRN1-210ENST00000472697 KRTAP6-1Q3LI64 71 aa0.42□□□□□ -2.34
XRN1-210ENST00000472697 PRM1P04553 51 aa0.41□□□□□ -2.34
XRN1-210ENST00000472697 UBL5Q9BZL1 73 aa0.4□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 11.3 ms